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MS020187 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020187
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS locus-related glycoprotein 1 binding pollen coat
Genome locationscaffold735:228004..228219
RNA-Seq ExpressionMS020187
SyntenyMS020187
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07492.1 hypothetical protein Prudu_019451 [Prunus dulcis]1.2e-1061.54Show/hide
Query:  AVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC
        A +RC E+L  SGC L DCGKKCWEKHH   ++CI  NV QT YAC+C F+C
Subjt:  AVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC

CAB4286917.1 unnamed protein product [Prunus armeniaca]3.6e-1057.69Show/hide
Query:  AVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC
        A +RC+E+L  SGC L DCGKKCW+KHH   H C+  NV Q  YAC+C F+C
Subjt:  AVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC

KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]4.5e-2165.71Show/hide
Query:  LCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDCPQN
        L    A+ILVP+G  AV+RCQ+KL D+GC L DCG+KCWEKHH  SHQCIPT+  QTIYAC+CF++C QN
Subjt:  LCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDCPQN

KAE8649772.1 hypothetical protein Csa_012405, partial [Cucumis sativus]5.9e-2174.19Show/hide
Query:  ALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC
        AL+L  + VSA QRCQ+ L ++GC L+DCGKKCWEKHHTISHQCIPTN  QTIYAC+CFFDC
Subjt:  ALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC

KGN64987.1 hypothetical protein Csa_022748 [Cucumis sativus]6.4e-1557.35Show/hide
Query:  LLCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC
        +L    A+I +P+G  A  RCQ+ L +SGC L DCG+KCWEKHH  S QCIPT+  QTIYAC+CF+ C
Subjt:  LLCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC

TrEMBL top hitse value%identityAlignment
A0A0A0KYP7 Uncharacterized protein4.6e-1145.07Show/hide
Query:  LLCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDCPQN
        ++ F  ++ILVP+G SA+ +CQ++L   GCI  +CG+KC + HH  + +CI T+   T YAC+CF++CP+N
Subjt:  LLCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDCPQN

A0A0A0L2R3 Uncharacterized protein2.6e-2269.57Show/hide
Query:  FLLCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC
        F L F  AL+L  + VSA QRCQ+ L ++GC L+DCGKKCWEKHHT+SHQCIPTN  QTIYAC+CFFDC
Subjt:  FLLCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC

A0A0A0LVZ5 Uncharacterized protein3.1e-1557.35Show/hide
Query:  LLCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC
        +L    A+I +P+G  A  RCQ+ L +SGC L DCG+KCWEKHH  S QCIPT+  QTIYAC+CF+ C
Subjt:  LLCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC

A0A4Y1RT05 Uncharacterized protein6.0e-1161.54Show/hide
Query:  AVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC
        A +RC E+L  SGC L DCGKKCWEKHH   ++CI  NV QT YAC+C F+C
Subjt:  AVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDC

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat2.2e-2165.71Show/hide
Query:  LCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDCPQN
        L    A+ILVP+G  AV+RCQ+KL D+GC L DCG+KCWEKHH  SHQCIPT+  QTIYAC+CF++C QN
Subjt:  LCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDCPQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTTGTTGTGTTTTGTAGCTGCGTTGATTTTGGTGCCCAAAGGAGTGTCAGCTGTCCAAAGATGTCAAGAAAAGTTGAGTGACAGTGGATGCATACTCGATGATTGTGG
GAAGAAATGTTGGGAGAAGCACCACACTATCTCACATCAGTGCATTCCTACTAATGTTCAGCAGACCATTTATGCTTGTTTCTGTTTCTTTGATTGTCCTCAAAAT
mRNA sequenceShow/hide mRNA sequence
TTTTTGTTGTGTTTTGTAGCTGCGTTGATTTTGGTGCCCAAAGGAGTGTCAGCTGTCCAAAGATGTCAAGAAAAGTTGAGTGACAGTGGATGCATACTCGATGATTGTGG
GAAGAAATGTTGGGAGAAGCACCACACTATCTCACATCAGTGCATTCCTACTAATGTTCAGCAGACCATTTATGCTTGTTTCTGTTTCTTTGATTGTCCTCAAAAT
Protein sequenceShow/hide protein sequence
FLLCFVAALILVPKGVSAVQRCQEKLSDSGCILDDCGKKCWEKHHTISHQCIPTNVQQTIYACFCFFDCPQN