CuGenDBv2

Gene ID	MS020192
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	30S ribosomal protein S7, chloroplastic
Genome location	scaffold735:263528..263744
RNA-Seq Expression	MS020192
Synteny	MS020192
Gene Ontology terms	GO:0000028 - ribosomal small subunit assembly (biological process) GO:0006412 - translation (biological process) GO:0009507 - chloroplast (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000235 - Ribosomal protein S5/S7 IPR023798 - Ribosomal protein S7 domain IPR036823 - Ribosomal protein S7 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6735396.1 hypothetical protein POTOM_062035 [Populus tomentosa]

5.9e-21

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VLHQAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

XP_034916860.1 30S ribosomal protein S7, chloroplastic [Populus alba]

5.9e-21

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VLHQAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

YP_001109549.1 ribosomal protein S7 [Populus trichocarpa]

5.9e-21

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VLHQAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

YP_009630937.1 ribosomal protein S7 [Bongardia chrysogonum]

9.0e-22

81.69

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TNL  VL QAIRGVT DIAVKARR+G STHQVPIEIGSTQGKALVIRWLLG S KRP RNM FKF+ EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

YP_009771869.1 ribosomal protein S7 [Baphia racemosa]

4.5e-21

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VL QAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP+RNM FK +FEL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

TrEMBL top hits

e value

%identity

Alignment

A0A075ECF3 30S ribosomal protein S7, chloroplastic

2.8e-21

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VLHQAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

A0A2P1CV49 30S ribosomal protein S7, chloroplastic

2.8e-21

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VLHQAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

A0A343AT60 30S ribosomal protein S7, chloroplastic

2.8e-21

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VLHQAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

A0A4D6E6X6 30S ribosomal protein S7, chloroplastic

4.4e-22

81.69

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TNL  VL QAIRGVT DIAVKARR+G STHQVPIEIGSTQGKALVIRWLLG S KRP RNM FKF+ EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

A0A6H0ELS5 Ribosomal protein S7

2.2e-21

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VL QAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP+RNM FK +FEL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

SwissProt top hits

e value

%identity

Alignment

A4GYV8 30S ribosomal protein S7, chloroplastic

7.7e-24

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VLHQAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

A4QJG0 30S ribosomal protein S7, chloroplastic

6.5e-23

77.46

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VL QAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

A4QJP4 30S ribosomal protein S7, chloroplastic

6.5e-23

77.46

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VL QAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

Q14F99 30S ribosomal protein S7, chloroplastic

7.7e-24

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VLHQAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

Q4VZK9 30S ribosomal protein S7, chloroplastic

1.3e-23

78.87

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VL QAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FKF+ EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00900.1 Ribosomal protein S7p/S5e family protein

4.6e-24

77.46

Show/hide

Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VL QAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

ATCG01240.1 ribosomal protein S7

4.6e-24

77.46

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Query:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL
        T+TN   VL QAIRGVT DIAVKARR+G STHQVPIEIGSTQGKAL IRWLLG S KRP RNM FK + EL
Subjt:  TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

Sequences

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CDS sequence

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ACAAAAACAAATCTACGAGATGTTTTACATCAAGCAATACGTGGAGTAACTCTCGATATAGCAGTAAAGGCAAGACGTATAGGCATATCAACTCATCAAGTACCCATTGA
AATAGGATCCACACAAGGAAAAGCACTTGTCATTCGTTGGTTATTAGGGACATCTTGTAAACGTCCGAGTCGAAATATGACTTTCAAATTCAATTTCGAGCTT

mRNA sequence

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Protein sequence

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TKTNLRDVLHQAIRGVTLDIAVKARRIGISTHQVPIEIGSTQGKALVIRWLLGTSCKRPSRNMTFKFNFEL

MS020192 (gene) of Bitter gourd (TR) v1 genome