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MS020194 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020194
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold735:268840..269071
RNA-Seq ExpressionMS020194
SyntenyMS020194
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032390.1 uncharacterized protein E6C27_scaffold219G002650 [Cucumis melo var. makuwa]4.2e-0943.06Show/hide
Query:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASK-MWYLSREFGFSDCFPKFVDEWLLEVL
        KSLN  +KLQ+K P  S+S +  C CL   +++DH+FLHC + SK    L   FG   C PK +D+W+++ L
Subjt:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASK-MWYLSREFGFSDCFPKFVDEWLLEVL

KAA0056469.1 uncharacterized protein E6C27_scaffold186G002430 [Cucumis melo var. makuwa]2.6e-1147.22Show/hide
Query:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMWYLSRE-FGFSDCFPKFVDEWLLEVL
        +SLN H+KLQ+K P  S+S S+CC CL   E++DH+FLHC  ASK W +    FG     P+ +D+W++E L
Subjt:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMWYLSRE-FGFSDCFPKFVDEWLLEVL

TYJ96358.1 uncharacterized protein E5676_scaffold1159G00180 [Cucumis melo var. makuwa]4.2e-0943.06Show/hide
Query:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASK-MWYLSREFGFSDCFPKFVDEWLLEVL
        KSLN  +KLQ+K P  S+S +  C CL   +++DH+FLHC + SK    L   FG   C PK +D+W+++ L
Subjt:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASK-MWYLSREFGFSDCFPKFVDEWLLEVL

TYK07901.1 DUF21 domain-containing protein [Cucumis melo var. makuwa]1.6e-0850Show/hide
Query:  WSLAYKSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMW
        WSLAY+SLN H K+QK      +S S+CC C    E++DH+FLHC +  K W
Subjt:  WSLAYKSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMW

TYK31299.1 protein FAM91A1 [Cucumis melo var. makuwa]5.3e-1248.05Show/hide
Query:  WSLAYKSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMW-YLSREFGFSDCFPKFVDEWLLEVL
        WSLAY+SLN  +KLQ+K P  S+S S+C  CL  AE+ DH+FLHC +A K W  +   F   DC PK +D+ + + L
Subjt:  WSLAYKSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMW-YLSREFGFSDCFPKFVDEWLLEVL

TrEMBL top hitse value%identityAlignment
A0A5A7SNM9 Uncharacterized protein2.0e-0943.06Show/hide
Query:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASK-MWYLSREFGFSDCFPKFVDEWLLEVL
        KSLN  +KLQ+K P  S+S +  C CL   +++DH+FLHC + SK    L   FG   C PK +D+W+++ L
Subjt:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASK-MWYLSREFGFSDCFPKFVDEWLLEVL

A0A5D3BDR5 Uncharacterized protein2.0e-0943.06Show/hide
Query:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASK-MWYLSREFGFSDCFPKFVDEWLLEVL
        KSLN  +KLQ+K P  S+S +  C CL   +++DH+FLHC + SK    L   FG   C PK +D+W+++ L
Subjt:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASK-MWYLSREFGFSDCFPKFVDEWLLEVL

A0A5D3C7R2 DUF21 domain-containing protein7.8e-0950Show/hide
Query:  WSLAYKSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMW
        WSLAY+SLN H K+QK      +S S+CC C    E++DH+FLHC +  K W
Subjt:  WSLAYKSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMW

A0A5D3E019 zf-RVT domain-containing protein1.3e-1147.22Show/hide
Query:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMWYLSRE-FGFSDCFPKFVDEWLLEVL
        +SLN H+KLQ+K P  S+S S+CC CL   E++DH+FLHC  ASK W +    FG     P+ +D+W++E L
Subjt:  KSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMWYLSRE-FGFSDCFPKFVDEWLLEVL

A0A5D3E632 Protein FAM91A12.6e-1248.05Show/hide
Query:  WSLAYKSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMW-YLSREFGFSDCFPKFVDEWLLEVL
        WSLAY+SLN  +KLQ+K P  S+S S+C  CL  AE+ DH+FLHC +A K W  +   F   DC PK +D+ + + L
Subjt:  WSLAYKSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMW-YLSREFGFSDCFPKFVDEWLLEVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAGTCTAGCCTACAAAAGTTTAAATGCTCATGATAAACTGCAAAAAAAGCTCCCTACTTGGAGCATATCTTCCTCAGTGTGTTGTTTCTGCTTAAATAATGCTGAAAG
TATTGACCACATCTTCTTACATTGCTTGTATGCTTCCAAAATGTGGTATTTGTCGAGAGAATTCGGTTTTTCTGACTGCTTTCCCAAGTTTGTGGATGAGTGGCTTCTTG
AAGTTCTT
mRNA sequenceShow/hide mRNA sequence
TGGAGTCTAGCCTACAAAAGTTTAAATGCTCATGATAAACTGCAAAAAAAGCTCCCTACTTGGAGCATATCTTCCTCAGTGTGTTGTTTCTGCTTAAATAATGCTGAAAG
TATTGACCACATCTTCTTACATTGCTTGTATGCTTCCAAAATGTGGTATTTGTCGAGAGAATTCGGTTTTTCTGACTGCTTTCCCAAGTTTGTGGATGAGTGGCTTCTTG
AAGTTCTT
Protein sequenceShow/hide protein sequence
WSLAYKSLNAHDKLQKKLPTWSISSSVCCFCLNNAESIDHIFLHCLYASKMWYLSREFGFSDCFPKFVDEWLLEVL