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MS020196 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020196
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOW QUALITY PROTEIN: keratin, type II cytoskeletal 1-like
Genome locationscaffold735:311097..311324
RNA-Seq ExpressionMS020196
SyntenyMS020196
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021734048.1 glycine-rich cell wall structural protein 1.0 [Chenopodium quinoa]7.0e-0470.59Show/hide
Query:  GGGGKGGGGGGGGGSRGGGGGGG---------GGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK
        GGGGKGGGGGGGGG +GGGGGGG         GG GGGSK GGG   G MVAPGSGGSSYISRG FESNPGGYFS     EK  K
Subjt:  GGGGKGGGGGGGGGSRGGGGGGG---------GGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK
XP_022151641.1 LOW QUALITY PROTEIN: keratin, type II cytoskeletal 1-like [Momordica charantia]4.4e-1496Show/hide
Query:  GGGKGGGGGGGGGSRGGGGGGGGGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK
        GGGKGGGGGGGG   GGGGGGGGGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK
Subjt:  GGGKGGGGGGGGGSRGGGGGGGGGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK
TrEMBL top hitse value%identityAlignment
A0A6J1DFA1 LOW QUALITY PROTEIN: keratin, type II cytoskeletal 1-like2.1e-1496Show/hide
Query:  GGGKGGGGGGGGGSRGGGGGGGGGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK
        GGGKGGGGGGGG   GGGGGGGGGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK
Subjt:  GGGKGGGGGGGGGSRGGGGGGGGGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK
A0A803M0W4 Uncharacterized protein2.6e-0477.92Show/hide
Query:  GGGGKGGGGG-GGGGSRGGGGGGGGGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK
        GGGGKGGGGG GGGG R GGGGGG GGGGGSK GGG   G MVAPGSGGSSYISRG FES+PG YFS  H AEK  K
Subjt:  GGGGKGGGGG-GGGGSRGGGGGGGGGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTGGCGGCGGAAAAGGCGGAGGAGGAGGCGGCGGCGGTGGCAGCAGAGGTGGAGGAGGTGGTGGCGGCGGCGGTGGCGGAGGAGGTAGCAAAGTTGGTGGCGGTGGAAA
TTCAGGAATGATGGTTGCTCCAGGGAGTGGAGGTAGCAGTTATATCTCTCGAGGTGGATTTGAAAGCAATCCTGGAGGCTATTTTAGTAATCTTCATGGCGCCGAGAAAA
GTGGCAAG
mRNA sequenceShow/hide mRNA sequence
GGTGGCGGCGGAAAAGGCGGAGGAGGAGGCGGCGGCGGTGGCAGCAGAGGTGGAGGAGGTGGTGGCGGCGGCGGTGGCGGAGGAGGTAGCAAAGTTGGTGGCGGTGGAAA
TTCAGGAATGATGGTTGCTCCAGGGAGTGGAGGTAGCAGTTATATCTCTCGAGGTGGATTTGAAAGCAATCCTGGAGGCTATTTTAGTAATCTTCATGGCGCCGAGAAAA
GTGGCAAG
Protein sequenceShow/hide protein sequence
GGGGKGGGGGGGGGSRGGGGGGGGGGGGGSKVGGGGNSGMMVAPGSGGSSYISRGGFESNPGGYFSNLHGAEKSGK