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MS020198 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020198
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontransposon Tf2-1 polyprotein isoform X1
Genome locationscaffold735:392498..392587
RNA-Seq ExpressionMS020198
SyntenyMS020198
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032165.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]1.1e-0576.67Show/hide
Query:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
        NKFKK+EMP+F+ EDLD+WLFRA+RYF IH
Subjt:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
KAA0056333.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]1.5e-0576.67Show/hide
Query:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
        NKFKK+EMP+F+ ED D+WLFRADRYF IH
Subjt:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
KAA0064313.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]2.5e-0576.67Show/hide
Query:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
        NKFKK+EMPIF+ EDLD+WLFRA++YF IH
Subjt:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
TYK10830.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]3.2e-0576.67Show/hide
Query:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
        +KFKK+EMP+F+ ED DAWLFRADRYF IH
Subjt:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
XP_016902037.1 PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Cucumis melo]1.1e-0576.67Show/hide
Query:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
        NKFKK+EMP+F+ EDLD+WLFRA+RYF IH
Subjt:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
TrEMBL top hitse value%identityAlignment
A0A1S4E1D6 transposon Tf2-1 polyprotein isoform X15.4e-0676.67Show/hide
Query:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
        NKFKK+EMP+F+ EDLD+WLFRA+RYF IH
Subjt:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
A0A5A7UU09 Transposon Tf2-1 polyprotein isoform X11.6e-0573.33Show/hide
Query:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
        NKFKK+EMP+F+ EDLD+WLFR +RYF IH
Subjt:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
A0A5A7V859 Transposon Tf2-1 polyprotein isoform X11.2e-0576.67Show/hide
Query:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
        NKFKK+EMPIF+ EDLD+WLFRA++YF IH
Subjt:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
A0A5D3BU40 Transposon Tf2-1 polyprotein isoform X17.1e-0676.67Show/hide
Query:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
        NKFKK+EMP+F+ ED D+WLFRADRYF IH
Subjt:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
A0A5D3CSL4 Transposon Tf2-1 polyprotein isoform X15.4e-0676.67Show/hide
Query:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
        NKFKK+EMP+F+ EDLD+WLFRA+RYF IH
Subjt:  NKFKKLEMPIFSSEDLDAWLFRADRYFDIH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACAAATTCAAGAAATTGGAAATGCCAATTTTCTCTAGTGAAGACCTCGATGCGTGGCTTTTCCGAGCCGATAGGTACTTTGATATTCAC
mRNA sequenceShow/hide mRNA sequence
AACAAATTCAAGAAATTGGAAATGCCAATTTTCTCTAGTGAAGACCTCGATGCGTGGCTTTTCCGAGCCGATAGGTACTTTGATATTCAC
Protein sequenceShow/hide protein sequence
NKFKKLEMPIFSSEDLDAWLFRADRYFDIH