; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020204 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020204
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpalmitoyl-protein thioesterase 1-like
Genome locationscaffold665:35935..47575
RNA-Seq ExpressionMS020204
SyntenyMS020204
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR029058 - Alpha/Beta hydrolase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOA18384.1 hypothetical protein CARUB_v10006914mg [Capsella rubella]1.4e-3658.62Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        IE+YL+YS++LP+LNNERPGE+NST+K+RF+SLHNLVL+  +N+ +L+P+E++WFGYY DG+   +LP Q+T LY EDWIGL++L++ G+V+F  VPG H
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFL
         E  DE L ++VVP+L
Subjt:  AEASDETLSEFVVPFL

XP_010440000.1 PREDICTED: palmitoyl-protein thioesterase 3-like isoform X1 [Camelina sativa]1.4e-3661.21Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        I EYL++S++LPKLNNERPGE+NSTYKERF+SLHNLVL+  E ++VLIPKES+WFGYY DG    ILP ++T LY EDWIGL++L+  G+++F  +PGAH
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFL
         + +D+ + E+VVP+L
Subjt:  AEASDETLSEFVVPFL

XP_022158107.1 palmitoyl-protein thioesterase 1-like [Momordica charantia]1.8e-4476.27Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        IE YLK S+FLPKLNNER  +RNSTYKERFSSL+ LVLL NENE +LIPKESA FGYYKDGST+E+LPAQET+LYKEDWIGLRSL+E G+V +E VPG H
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFLVD
        A++ DETL++FVVP+LVD
Subjt:  AEASDETLSEFVVPFLVD

XP_022158115.1 palmitoyl-protein thioesterase 1-like [Momordica charantia]2.4e-6598.43Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTE ILPAQE DLYKEDWIGLRSLNEVGRVRFEQVPGAH
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFLVDWNQQQPSTM
        AEASDETLSEFVVPFLVDWNQQQPSTM
Subjt:  AEASDETLSEFVVPFLVDWNQQQPSTM

XP_022158124.1 palmitoyl-protein thioesterase 1-like, partial [Momordica charantia]5.6e-3865.55Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTE-EILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGA
        IEEY+K S+FLPKLNNERP ERN TY +RFSSL+ LVLL NE +++L P+E+AWFGYY+DGST+ +++PA ET+LYKEDWIGL+ LNE G+V   +VPG 
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTE-EILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGA

Query:  HAEASDETLSEFVVPFLVD
        HA   DE++S FVVP+LVD
Subjt:  HAEASDETLSEFVVPFLVD

TrEMBL top hitse value%identityAlignment
A0A6J1DUW7 palmitoyl-protein thioesterase 1-like1.2e-6598.43Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTE ILPAQE DLYKEDWIGLRSLNEVGRVRFEQVPGAH
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFLVDWNQQQPSTM
        AEASDETLSEFVVPFLVDWNQQQPSTM
Subjt:  AEASDETLSEFVVPFLVDWNQQQPSTM

A0A6J1DWB7 palmitoyl-protein thioesterase 1-like8.7e-4576.27Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        IE YLK S+FLPKLNNER  +RNSTYKERFSSL+ LVLL NENE +LIPKESA FGYYKDGST+E+LPAQET+LYKEDWIGLRSL+E G+V +E VPG H
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFLVD
        A++ DETL++FVVP+LVD
Subjt:  AEASDETLSEFVVPFLVD

A0A6J1DYG9 palmitoyl-protein thioesterase 1-like2.7e-3865.55Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTE-EILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGA
        IEEY+K S+FLPKLNNERP ERN TY +RFSSL+ LVLL NE +++L P+E+AWFGYY+DGST+ +++PA ET+LYKEDWIGL+ LNE G+V   +VPG 
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTE-EILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGA

Query:  HAEASDETLSEFVVPFLVD
        HA   DE++S FVVP+LVD
Subjt:  HAEASDETLSEFVVPFLVD

A0A6J1DYX2 palmitoyl-protein thioesterase 1-like1.1e-3662.7Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        I+EYLK SR LPKLNNE P  RN+TY +RFSSL  LVLL NE +    P+ES+WFGYYKDGS + +LPA ET LYKEDWIGL+ LNE GRV+  +VPG H
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFLVD--WNQQQP
        AEA+D+ L EFV PFL++  +N   P
Subjt:  AEASDETLSEFVVPFLVD--WNQQQP

R0GNE1 Uncharacterized protein6.7e-3758.62Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        IE+YL+YS++LP+LNNERPGE+NST+K+RF+SLHNLVL+  +N+ +L+P+E++WFGYY DG+   +LP Q+T LY EDWIGL++L++ G+V+F  VPG H
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFL
         E  DE L ++VVP+L
Subjt:  AEASDETLSEFVVPFL

SwissProt top hitse value%identityAlignment
O88531 Palmitoyl-protein thioesterase 12.8e-1635.4Show/hide
Query:  YLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAHAEA
        Y  YS FL  +N ER    N +YK+   +L   V++   N++++ P +S WFG+Y+ G  +E +P QE+ LY ED +GL+ +++ G++ F    G H + 
Subjt:  YLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAHAEA

Query:  SDETLSEFVVPFL
        S E  +  ++PFL
Subjt:  SDETLSEFVVPFL

P45479 Palmitoyl-protein thioesterase 11.3e-1636.52Show/hide
Query:  EEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAHA
        E Y   S FL  +N ER    N +YKE   +L   V++   N++++ P +S WFG+Y+ G  +E +P QET LY ED +GL+ +++ G++ F    G H 
Subjt:  EEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAHA

Query:  EASDETLSEFVVPFL
        + S E  +  ++PFL
Subjt:  EASDETLSEFVVPFL

P50897 Palmitoyl-protein thioesterase 16.3e-1634.51Show/hide
Query:  YLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAHAEA
        Y  +S FL  +N ER    N +YK+   +L   V++   N++++ P +S WFG+Y+ G  +E +P QET LY +D +GL+ ++  G++ F    G H + 
Subjt:  YLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAHAEA

Query:  SDETLSEFVVPFL
        S+E     ++PFL
Subjt:  SDETLSEFVVPFL

Q20390 Palmitoyl-protein thioesterase 13.1e-2346.9Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        +EEY K S FL  +NNE     N TYK    SL NLVL+    +++++PK+S+WFG+YKDG  + ILP  ETDLYKED IGL+ L+E GR+ F  V G H
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVV
         +     L   ++
Subjt:  AEASDETLSEFVV

Q54CM0 Palmitoyl-protein thioesterase 33.6e-1938.66Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        I++YL+ S FL  +NNE    +N+TYKE  + L+ +VL  + N+  +IPKES WF +Y DGS  E++P Q+   Y EDW+GLR+L+E  R+ F      H
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFLVDW
            D  + ++  P+  ++
Subjt:  AEASDETLSEFVVPFLVDW

Arabidopsis top hitse value%identityAlignment
AT3G60340.1 alpha/beta-Hydrolases superfamily protein1.2e-3556.35Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        I  Y++  RFLPKLNNE P  +NSTYKERFSSL NLVL+  E++ +LIPKE++WFGYY DGS + ILP QET LY EDWIGLR+L+E G+V+F  V G H
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFLVDWNQQQPST
         + S   + + +VP+L D +    ST
Subjt:  AEASDETLSEFVVPFLVDWNQQQPST

AT4G17470.1 alpha/beta-Hydrolases superfamily protein3.5e-3856.78Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDG--STEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPG
        I+ YL++S++LPKLNNERPGE+NST+K+RF+SL NLVL+  +N+ +L+P+E++WFGYY DG  S+  +LP Q+T LY EDWIGL++L++ G+VRF  VPG
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDG--STEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPG

Query:  AHAEASDETLSEFVVPFL
         H E ++E L ++VVP+L
Subjt:  AHAEASDETLSEFVVPFL

AT4G17470.2 alpha/beta-Hydrolases superfamily protein3.5e-3856.78Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDG--STEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPG
        I+ YL++S++LPKLNNERPGE+NST+K+RF+SL NLVL+  +N+ +L+P+E++WFGYY DG  S+  +LP Q+T LY EDWIGL++L++ G+VRF  VPG
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDG--STEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPG

Query:  AHAEASDETLSEFVVPFL
         H E ++E L ++VVP+L
Subjt:  AHAEASDETLSEFVVPFL

AT4G17470.3 alpha/beta-Hydrolases superfamily protein3.5e-3856.78Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDG--STEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPG
        I+ YL++S++LPKLNNERPGE+NST+K+RF+SL NLVL+  +N+ +L+P+E++WFGYY DG  S+  +LP Q+T LY EDWIGL++L++ G+VRF  VPG
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDG--STEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPG

Query:  AHAEASDETLSEFVVPFL
         H E ++E L ++VVP+L
Subjt:  AHAEASDETLSEFVVPFL

AT4G17483.1 alpha/beta-Hydrolases superfamily protein1.6e-3858.97Show/hide
Query:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH
        I +YL++S++LPKLNNERP ERNST+K+RF++LHNLVL+  E++ +LIPKE+AWFGYY+D   + +L AQ+T LY+EDWIGL++L+  G+V+FE V G H
Subjt:  IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAH

Query:  AEASDETLSEFVVPFLV
           SDE + EFVVP+L+
Subjt:  AEASDETLSEFVVPFLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAGGAATATTTGAAGTATTCTAGATTCCTTCCCAAGCTCAACAATGAACGTCCAGGAGAAAGAAACTCGACTTACAAGGAGCGTTTTAGTAGCTTGCACAACTTGGT
GCTTCTTGCAAATGAGAACGAGAACGTTTTGATTCCAAAAGAATCTGCATGGTTTGGATATTATAAAGATGGGAGCACTGAAGAAATTTTACCTGCACAAGAGACAGATC
TTTATAAAGAGGATTGGATTGGGTTGAGGAGTTTGAATGAGGTGGGAAGAGTGAGATTTGAGCAAGTACCAGGAGCTCATGCTGAAGCATCTGATGAAACTTTGAGTGAG
TTTGTGGTGCCTTTCTTGGTGGACTGGAATCAGCAGCAGCCCTCAACCATGCACCTC
mRNA sequenceShow/hide mRNA sequence
ATTGAGGAATATTTGAAGTATTCTAGATTCCTTCCCAAGCTCAACAATGAACGTCCAGGAGAAAGAAACTCGACTTACAAGGAGCGTTTTAGTAGCTTGCACAACTTGGT
GCTTCTTGCAAATGAGAACGAGAACGTTTTGATTCCAAAAGAATCTGCATGGTTTGGATATTATAAAGATGGGAGCACTGAAGAAATTTTACCTGCACAAGAGACAGATC
TTTATAAAGAGGATTGGATTGGGTTGAGGAGTTTGAATGAGGTGGGAAGAGTGAGATTTGAGCAAGTACCAGGAGCTCATGCTGAAGCATCTGATGAAACTTTGAGTGAG
TTTGTGGTGCCTTTCTTGGTGGACTGGAATCAGCAGCAGCCCTCAACCATGCACCTC
Protein sequenceShow/hide protein sequence
IEEYLKYSRFLPKLNNERPGERNSTYKERFSSLHNLVLLANENENVLIPKESAWFGYYKDGSTEEILPAQETDLYKEDWIGLRSLNEVGRVRFEQVPGAHAEASDETLSE
FVVPFLVDWNQQQPSTMHL