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MS020206 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020206
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpalmitoyl-protein thioesterase 1-like
Genome locationscaffold665:60397..61441
RNA-Seq ExpressionMS020206
SyntenyMS020206
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR029058 - Alpha/Beta hydrolase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RWR89765.1 palmitoyl-protein thioesterase 1 isoform X1 [Cinnamomum micranthum f. kanehirae]3.4e-3461.86Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
        I  YLK  +FLPKLNNERP +RNSTYKERFSSL KLVL+M E++T+LIP+E++ FGYY DGS   VLPAQ+T+LY EDWIGL++LD+ GKV++ +VPG H
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH

Query:  ADSPDETLNKFVVPYLVD
               + K +VPYL D
Subjt:  ADSPDETLNKFVVPYLVD

XP_022158107.1 palmitoyl-protein thioesterase 1-like [Momordica charantia]4.5e-5898.31Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
        IENYLKISKFLPKLNNER EDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGS DEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH

Query:  ADSPDETLNKFVVPYLVD
        ADSPDETLNKFVVPYLVD
Subjt:  ADSPDETLNKFVVPYLVD

XP_022158115.1 palmitoyl-protein thioesterase 1-like [Momordica charantia]4.1e-4374.58Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
        IE YLK S+FLPKLNNERP +RNSTYKERFSSL+ LVLL NENE +LIPKESA FGYYKDGS + +LPAQE +LYKEDWIGLRSL+E G+V +E VPG H
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH

Query:  ADSPDETLNKFVVPYLVD
        A++ DETL++FVVP+LVD
Subjt:  ADSPDETLNKFVVPYLVD

XP_022158124.1 palmitoyl-protein thioesterase 1-like, partial [Momordica charantia]2.7e-3968.91Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSID-EVLPAQETELYKEDWIGLRSLDERGKVVYETVPGV
        IE Y+K SKFLPKLNNERPE+RN TY +RFSSLNKLVLLMNE +++L P+E+A FGYY+DGS D +V+PA ET LYKEDWIGL+ L+E GKV+   VPG 
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSID-EVLPAQETELYKEDWIGLRSLDERGKVVYETVPGV

Query:  HADSPDETLNKFVVPYLVD
        HA+ PDE+++ FVVPYLVD
Subjt:  HADSPDETLNKFVVPYLVD

XP_022158133.1 palmitoyl-protein thioesterase 1-like [Momordica charantia]3.4e-3464.71Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSID-EVLPAQETELYKEDWIGLRSLDERGKVVYETVPGV
        I+ YLK SKFLPKLNNE  +++N  YKERFSSLNKLVLLM  +++ LIP+E+A FGYY+DGS D +V+PA ET LYKE+WIGL+ L+E GKV+   VPG 
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSID-EVLPAQETELYKEDWIGLRSLDERGKVVYETVPGV

Query:  HADSPDETLNKFVVPYLVD
        HA+ PDE+++ FVVPYLVD
Subjt:  HADSPDETLNKFVVPYLVD

TrEMBL top hitse value%identityAlignment
A0A443PG75 Palmitoyl-protein thioesterase 1 isoform X11.7e-3461.86Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
        I  YLK  +FLPKLNNERP +RNSTYKERFSSL KLVL+M E++T+LIP+E++ FGYY DGS   VLPAQ+T+LY EDWIGL++LD+ GKV++ +VPG H
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH

Query:  ADSPDETLNKFVVPYLVD
               + K +VPYL D
Subjt:  ADSPDETLNKFVVPYLVD

A0A6J1DUW7 palmitoyl-protein thioesterase 1-like2.0e-4374.58Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
        IE YLK S+FLPKLNNERP +RNSTYKERFSSL+ LVLL NENE +LIPKESA FGYYKDGS + +LPAQE +LYKEDWIGLRSL+E G+V +E VPG H
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH

Query:  ADSPDETLNKFVVPYLVD
        A++ DETL++FVVP+LVD
Subjt:  ADSPDETLNKFVVPYLVD

A0A6J1DV90 palmitoyl-protein thioesterase 1-like1.7e-3464.71Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSID-EVLPAQETELYKEDWIGLRSLDERGKVVYETVPGV
        I+ YLK SKFLPKLNNE  +++N  YKERFSSLNKLVLLM  +++ LIP+E+A FGYY+DGS D +V+PA ET LYKE+WIGL+ L+E GKV+   VPG 
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSID-EVLPAQETELYKEDWIGLRSLDERGKVVYETVPGV

Query:  HADSPDETLNKFVVPYLVD
        HA+ PDE+++ FVVPYLVD
Subjt:  HADSPDETLNKFVVPYLVD

A0A6J1DWB7 palmitoyl-protein thioesterase 1-like2.2e-5898.31Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
        IENYLKISKFLPKLNNER EDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGS DEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH

Query:  ADSPDETLNKFVVPYLVD
        ADSPDETLNKFVVPYLVD
Subjt:  ADSPDETLNKFVVPYLVD

A0A6J1DYG9 palmitoyl-protein thioesterase 1-like1.3e-3968.91Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSID-EVLPAQETELYKEDWIGLRSLDERGKVVYETVPGV
        IE Y+K SKFLPKLNNERPE+RN TY +RFSSLNKLVLLMNE +++L P+E+A FGYY+DGS D +V+PA ET LYKEDWIGL+ L+E GKV+   VPG 
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSID-EVLPAQETELYKEDWIGLRSLDERGKVVYETVPGV

Query:  HADSPDETLNKFVVPYLVD
        HA+ PDE+++ FVVPYLVD
Subjt:  HADSPDETLNKFVVPYLVD

SwissProt top hitse value%identityAlignment
O88531 Palmitoyl-protein thioesterase 13.2e-1435.4Show/hide
Query:  YLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVHADS
        Y   S FL  +N ER    N +YK+   +L K V++   N++I+ P +S  FG+Y+ G   E +P QE+ LY ED +GL+ +D+ GK+V+    G H   
Subjt:  YLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVHADS

Query:  PDETLNKFVVPYL
          E     ++P+L
Subjt:  PDETLNKFVVPYL

P45478 Palmitoyl-protein thioesterase 13.2e-1434.51Show/hide
Query:  YLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVHADS
        Y   S FL  +N ER    N +YK+   +L K V++   N+TI+ P +S  FG+Y+ G   E +P QE+ LY +D +GL+++D+ G++V+  + G H   
Subjt:  YLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVHADS

Query:  PDETLNKFVVPYL
         +E     ++P+L
Subjt:  PDETLNKFVVPYL

P45479 Palmitoyl-protein thioesterase 12.8e-1537.39Show/hide
Query:  ENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVHA
        E Y   S FL  +N ER    N +YKE   +L K V++   N++I+ P +S  FG+Y+ G   E +P QET LY ED +GL+ +D+ GK+V+    G H 
Subjt:  ENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVHA

Query:  DSPDETLNKFVVPYL
            E     ++P+L
Subjt:  DSPDETLNKFVVPYL

Q20390 Palmitoyl-protein thioesterase 11.5e-1943.22Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
        +E Y K S FL  +NNE   + N TYK    SL  LVL+    + +++PK+S+ FG+YKDG ID +LP  ET+LYKED IGL+ L E G++ +  V G H
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH

Query:  ADSPDETL-NKFVVPYLV
           P   L N  +  Y +
Subjt:  ADSPDETL-NKFVVPYLV

Q54CM0 Palmitoyl-protein thioesterase 31.7e-2043.8Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
        I+ YL+ S FL  +NNE  + +N+TYKE  + LN +VL  + N+  +IPKES  F +Y DGS  EV+P Q+   Y EDW+GLR+LDE  ++ + T    H
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH

Query:  ADSPDETLNK-----FVVPYL
         D P E   K     F +PYL
Subjt:  ADSPDETLNK-----FVVPYL

Arabidopsis top hitse value%identityAlignment
AT3G60340.1 alpha/beta-Hydrolases superfamily protein1.8e-3359.32Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
        I  Y++  +FLPKLNNE P  +NSTYKERFSSL  LVL+M E++TILIPKE++ FGYY DGS   +LP QET+LY EDWIGLR+LDE GKV +  V G H
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH

Query:  ADSPDETLNKFVVPYLVD
               + K +VPYL D
Subjt:  ADSPDETLNKFVVPYLVD

AT4G17470.1 alpha/beta-Hydrolases superfamily protein1.1e-3559.32Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDG--SIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPG
        I+NYL+ SK+LPKLNNERP ++NST+K+RF+SL  LVL+M +N+TIL+P+E++ FGYY DG  S   VLP Q+T+LY EDWIGL++LD+ GKV + +VPG
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDG--SIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPG

Query:  VHADSPDETLNKFVVPYL
         H +  +E L K+VVPYL
Subjt:  VHADSPDETLNKFVVPYL

AT4G17470.2 alpha/beta-Hydrolases superfamily protein1.1e-3559.32Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDG--SIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPG
        I+NYL+ SK+LPKLNNERP ++NST+K+RF+SL  LVL+M +N+TIL+P+E++ FGYY DG  S   VLP Q+T+LY EDWIGL++LD+ GKV + +VPG
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDG--SIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPG

Query:  VHADSPDETLNKFVVPYL
         H +  +E L K+VVPYL
Subjt:  VHADSPDETLNKFVVPYL

AT4G17470.3 alpha/beta-Hydrolases superfamily protein1.1e-3559.32Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDG--SIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPG
        I+NYL+ SK+LPKLNNERP ++NST+K+RF+SL  LVL+M +N+TIL+P+E++ FGYY DG  S   VLP Q+T+LY EDWIGL++LD+ GKV + +VPG
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDG--SIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPG

Query:  VHADSPDETLNKFVVPYL
         H +  +E L K+VVPYL
Subjt:  VHADSPDETLNKFVVPYL

AT4G17483.1 alpha/beta-Hydrolases superfamily protein3.9e-3658.97Show/hide
Query:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH
        I  YL+ SK+LPKLNNERP++RNST+K+RF++L+ LVL+M E++T+LIPKE+A FGYY+D   D +L AQ+T+LY+EDWIGL++LD  GKV +E+V G H
Subjt:  IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVH

Query:  ADSPDETLNKFVVPYLV
            DE + +FVVPYL+
Subjt:  ADSPDETLNKFVVPYLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAGAACTATTTGAAGATTTCAAAATTCCTTCCGAAGCTCAATAATGAACGTCCGGAAGATAGAAACTCTACTTACAAAGAGCGTTTTAGTAGCCTGAACAAATTGGT
GCTACTTATGAACGAAAACGAAACCATCTTGATTCCAAAGGAATCTGCATTGTTTGGATACTATAAGGATGGCAGCATTGATGAAGTTCTACCAGCACAAGAGACAGAAC
TGTATAAAGAGGACTGGATTGGATTGAGGAGTTTGGATGAGAGGGGAAAAGTGGTATACGAGACAGTACCAGGAGTTCATGCTGATTCACCTGATGAAACTTTGAACAAA
TTTGTGGTGCCTTATTTGGTGGAT
mRNA sequenceShow/hide mRNA sequence
ATTGAGAACTATTTGAAGATTTCAAAATTCCTTCCGAAGCTCAATAATGAACGTCCGGAAGATAGAAACTCTACTTACAAAGAGCGTTTTAGTAGCCTGAACAAATTGGT
GCTACTTATGAACGAAAACGAAACCATCTTGATTCCAAAGGAATCTGCATTGTTTGGATACTATAAGGATGGCAGCATTGATGAAGTTCTACCAGCACAAGAGACAGAAC
TGTATAAAGAGGACTGGATTGGATTGAGGAGTTTGGATGAGAGGGGAAAAGTGGTATACGAGACAGTACCAGGAGTTCATGCTGATTCACCTGATGAAACTTTGAACAAA
TTTGTGGTGCCTTATTTGGTGGAT
Protein sequenceShow/hide protein sequence
IENYLKISKFLPKLNNERPEDRNSTYKERFSSLNKLVLLMNENETILIPKESALFGYYKDGSIDEVLPAQETELYKEDWIGLRSLDERGKVVYETVPGVHADSPDETLNK
FVVPYLVD