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MS020217 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020217
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold665:147329..147916
RNA-Seq ExpressionMS020217
SyntenyMS020217
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66104.1 hypothetical protein Csa_007574 [Cucumis sativus]9.8e-3450.99Show/hide
Query:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDEN----------QDNSSQESTAKLNSDHPISSLTNDHQEGRKE
        MDNR+ KFQ FDI Y++FHF+M+ILSSKA+E VTLG S   E NAS+ E+   S+ + +          + N SQE    L SDH  S LTNDH +  KE
Subjt:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDEN----------QDNSSQESTAKLNSDHPISSLTNDHQEGRKE

Query:  LHSIEENGSPRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKS
        +   +EN                 K  ++ V LPS TK  PKK+VSI E VEDI+SIM +RRK KG  KSKSFDFDN YD SLKP RSILKVGS I D  
Subjt:  LHSIEENGSPRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKS

Query:  DM
        D+
Subjt:  DM

TYK10218.1 hypothetical protein E5676_scaffold16G003640 [Cucumis melo var. makuwa]2.0e-3149.5Show/hide
Query:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDEN----------QDNSSQESTAKLNSDHPISSLTNDHQEGRKE
        MDNR+ KFQ  DI Y++F+F+++ILSSKA+E VTLG   S ESNAS+ E+   S+ D +          + N SQE    L SDH  SSL NDH +  KE
Subjt:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDEN----------QDNSSQESTAKLNSDHPISSLTNDHQEGRKE

Query:  LHSIEENGSPRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKS
        +   +EN                 K  ++ V LPS TK  PKK+VSI E VE I+SIM +R+K KG  KSKSFDFDN YD SLKP RSILKVGS I D  
Subjt:  LHSIEENGSPRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKS

Query:  DM
        D+
Subjt:  DM

XP_022159281.1 uncharacterized protein LOC111025690 [Momordica charantia]1.3e-9999.49Show/hide
Query:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKELHSIEENGSP
        MDN ECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKELHSIEENGSP
Subjt:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKELHSIEENGSP

Query:  RIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKSDMLNSL
        RIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKSDMLNSL
Subjt:  RIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKSDMLNSL

XP_022961566.1 uncharacterized protein LOC111462109 [Cucurbita moschata]2.0e-2366.07Show/hide
Query:  KELHSIEENGS----PRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGS
        KELHS + + S      I DK+D N           VPLPS  K  PKKIVSIKETVEDI+SIM +RRK+KGTKKSKSFDFDN YDGSLKP+RSILKVGS
Subjt:  KELHSIEENGS----PRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGS

Query:  NINDKSDMLNSL
         +NDKSD+LNSL
Subjt:  NINDKSDMLNSL

XP_038880493.1 uncharacterized protein LOC120072152 [Benincasa hispida]3.2e-3752.97Show/hide
Query:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEV----------GLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKE
        MDN+  KFQ FDI Y++FHF+MK++SSKAQETV LG   S ESN S+ E+             ++ D  +   SQE    LNS+H  SSLTN+H    KE
Subjt:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEV----------GLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKE

Query:  LHSIEENGSPRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKS
        L   +E     I+  ND +             LPS TK  PKK+VSI ETVEDI+SIM +RRK KGTKKSKSFDFDNGYD SLKP+RSILKVGS I D S
Subjt:  LHSIEENGSPRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKS

Query:  DM
        D+
Subjt:  DM

TrEMBL top hitse value%identityAlignment
A0A0A0LYJ0 Uncharacterized protein4.7e-3450.99Show/hide
Query:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDEN----------QDNSSQESTAKLNSDHPISSLTNDHQEGRKE
        MDNR+ KFQ FDI Y++FHF+M+ILSSKA+E VTLG S   E NAS+ E+   S+ + +          + N SQE    L SDH  S LTNDH +  KE
Subjt:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDEN----------QDNSSQESTAKLNSDHPISSLTNDHQEGRKE

Query:  LHSIEENGSPRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKS
        +   +EN                 K  ++ V LPS TK  PKK+VSI E VEDI+SIM +RRK KG  KSKSFDFDN YD SLKP RSILKVGS I D  
Subjt:  LHSIEENGSPRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKS

Query:  DM
        D+
Subjt:  DM

A0A5D3CG66 Uncharacterized protein9.9e-3249.5Show/hide
Query:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDEN----------QDNSSQESTAKLNSDHPISSLTNDHQEGRKE
        MDNR+ KFQ  DI Y++F+F+++ILSSKA+E VTLG   S ESNAS+ E+   S+ D +          + N SQE    L SDH  SSL NDH +  KE
Subjt:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDEN----------QDNSSQESTAKLNSDHPISSLTNDHQEGRKE

Query:  LHSIEENGSPRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKS
        +   +EN                 K  ++ V LPS TK  PKK+VSI E VE I+SIM +R+K KG  KSKSFDFDN YD SLKP RSILKVGS I D  
Subjt:  LHSIEENGSPRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKS

Query:  DM
        D+
Subjt:  DM

A0A6J1E3G0 uncharacterized protein LOC1110256906.5e-10099.49Show/hide
Query:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKELHSIEENGSP
        MDN ECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKELHSIEENGSP
Subjt:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKELHSIEENGSP

Query:  RIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKSDMLNSL
        RIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKSDMLNSL
Subjt:  RIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKSDMLNSL

A0A6J1HAQ3 uncharacterized protein LOC1114621099.9e-2466.07Show/hide
Query:  KELHSIEENGS----PRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGS
        KELHS + + S      I DK+D N           VPLPS  K  PKKIVSIKETVEDI+SIM +RRK+KGTKKSKSFDFDN YDGSLKP+RSILKVGS
Subjt:  KELHSIEENGS----PRIEDKNDSNGNATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGS

Query:  NINDKSDMLNSL
         +NDKSD+LNSL
Subjt:  NINDKSDMLNSL

K7N572 Uncharacterized protein1.8e-0935.71Show/hide
Query:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKELHSIEENGSP
        MD RE   Q   ICYRL+HFL K L+S+A +TVTLG SR   S +S +               S +S AK      + S T    +  K+L   E  G P
Subjt:  MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKELHSIEENGSP

Query:  RIEDKNDSNGNATQKVEEEGVP---------------LPSATKGPP---KKIVSIKETVEDI-NSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILK
              DS  +  Q+ EE+  P               LP+ +  P    KK VSI E VE+I     L+R+ S+  +KS S D +   +  + P RSILK
Subjt:  RIEDKNDSNGNATQKVEEEGVP---------------LPSATKGPP---KKIVSIKETVEDI-NSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILK

Query:  VGSNINDKSD
        VGS++NDKS+
Subjt:  VGSNINDKSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATCGAGAATGCAAGTTTCAACTTTTCGACATCTGCTACCGTCTTTTCCATTTCCTTATGAAAATCCTATCATCTAAAGCCCAAGAAACTGTTACTCTTGGAGG
CTCAAGGTCGTCTGAATCGAATGCTTCAACTCTAGAGGTTGGTTTGTGCAGTCATCATGATGAAAATCAAGACAATTCGAGTCAAGAATCCACGGCTAAGTTGAATTCAG
ATCATCCTATTTCGTCTCTTACAAATGATCATCAAGAAGGACGAAAGGAGCTCCATTCCATTGAAGAAAATGGTTCTCCACGTATTGAAGATAAGAATGATTCGAATGGC
AATGCTACACAAAAAGTAGAAGAGGAGGGGGTACCATTACCTTCTGCAACAAAAGGACCTCCAAAGAAAATTGTTAGTATCAAAGAAACCGTTGAGGATATAAATTCTAT
TATGCTGCAAAGGAGGAAGAGCAAAGGAACCAAGAAGTCGAAATCCTTCGATTTCGATAATGGATATGATGGTTCTTTAAAGCCTTCTCGGTCGATTCTCAAGGTGGGCT
CTAATATAAATGACAAATCGGATATGTTAAACTCTTTG
mRNA sequenceShow/hide mRNA sequence
ATGGATAATCGAGAATGCAAGTTTCAACTTTTCGACATCTGCTACCGTCTTTTCCATTTCCTTATGAAAATCCTATCATCTAAAGCCCAAGAAACTGTTACTCTTGGAGG
CTCAAGGTCGTCTGAATCGAATGCTTCAACTCTAGAGGTTGGTTTGTGCAGTCATCATGATGAAAATCAAGACAATTCGAGTCAAGAATCCACGGCTAAGTTGAATTCAG
ATCATCCTATTTCGTCTCTTACAAATGATCATCAAGAAGGACGAAAGGAGCTCCATTCCATTGAAGAAAATGGTTCTCCACGTATTGAAGATAAGAATGATTCGAATGGC
AATGCTACACAAAAAGTAGAAGAGGAGGGGGTACCATTACCTTCTGCAACAAAAGGACCTCCAAAGAAAATTGTTAGTATCAAAGAAACCGTTGAGGATATAAATTCTAT
TATGCTGCAAAGGAGGAAGAGCAAAGGAACCAAGAAGTCGAAATCCTTCGATTTCGATAATGGATATGATGGTTCTTTAAAGCCTTCTCGGTCGATTCTCAAGGTGGGCT
CTAATATAAATGACAAATCGGATATGTTAAACTCTTTG
Protein sequenceShow/hide protein sequence
MDNRECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDENQDNSSQESTAKLNSDHPISSLTNDHQEGRKELHSIEENGSPRIEDKNDSNG
NATQKVEEEGVPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSILKVGSNINDKSDMLNSL