CuGenDBv2

Gene ID	MS020218
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	39S ribosomal protein L45, mitochondrial
Genome location	scaffold665:149080..161080
RNA-Seq Expression	MS020218
Synteny	MS020218
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0005840 - ribosome (cellular component)
InterPro domains	IPR007379 - Tim44-like domain IPR032710 - NTF2-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022159272.1 uncharacterized protein LOC111025682 [Momordica charantia]

3.4e-107

91.4

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Query:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
        R  GALKVSMLSPGFIYEPYSPRQ IPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
Subjt:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY

Query:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
        SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARM                IGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
Subjt:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW

Query:  VFEKSLFHEGAYWRLCGRIPI
        VFEKSLFHEGAYWRLCGRIPI
Subjt:  VFEKSLFHEGAYWRLCGRIPI

XP_022961563.1 39S ribosomal protein L45, mitochondrial isoform X1 [Cucurbita moschata]

4.7e-101

85.97

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Query:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
        R  GALKVSMLSPG IYEPYSPRQ IPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSK++FY EAVNLYKEINTLIANGDKTSLRKAVTE MY
Subjt:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY

Query:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
        SALKNEIKLRESKW KVYWEMI+PVVKIRTLRAR+                IGVDR+DLEKVF+QLTLEILAKQKFEAYN+EGAVVAGDKSKEVLVRDIW
Subjt:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW

Query:  VFEKSLFHEGAYWRLCGRIPI
        VFEKSLFHEGA+WRLCGRIPI
Subjt:  VFEKSLFHEGAYWRLCGRIPI

XP_022968772.1 uncharacterized protein LOC111467908 isoform X1 [Cucurbita maxima]

9.4e-102

86.43

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Query:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
        R  GALKVSMLSPG IYEPYSPRQ IPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSK++FY EAVNLYKEINTLIANGDKTSLRKAVTENMY
Subjt:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY

Query:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
        SALKNEIKLRESKW KVYWEMI+PVVKIRTLRAR+                IGVDR+DLEKVF+QLTLEILAKQKFEAYN+EGAVVAGDKSKEVLVRDIW
Subjt:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW

Query:  VFEKSLFHEGAYWRLCGRIPI
        VFEKSLFHEGA+WRLCGRIPI
Subjt:  VFEKSLFHEGAYWRLCGRIPI

XP_038879465.1 uncharacterized protein LOC120071330 isoform X1 [Benincasa hispida]

4.2e-102

87.27

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Query:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
        R  GALKVSMLSPGFIYEPYSPRQ IPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSK++FY EAVNLYKEINTLIANGDKTSLRKAVTENMY
Subjt:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY

Query:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
        SALKNEIKLRESKW KVYWEMIVPVVKIRTLRAR+                IGVDR+DLEKVF+QLTLEILAKQKFEAY+SEGAVVAGDKSKEVLVRDIW
Subjt:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW

Query:  VFEKSLFHEGAYWRLCGRIP
        VFEKSLFHEGA+WRLCGRIP
Subjt:  VFEKSLFHEGAYWRLCGRIP

XP_038879466.1 uncharacterized protein LOC120071330 isoform X2 [Benincasa hispida]

4.2e-102

87.27

Show/hide

Query:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
        R  GALKVSMLSPGFIYEPYSPRQ IPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSK++FY EAVNLYKEINTLIANGDKTSLRKAVTENMY
Subjt:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY

Query:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
        SALKNEIKLRESKW KVYWEMIVPVVKIRTLRAR+                IGVDR+DLEKVF+QLTLEILAKQKFEAY+SEGAVVAGDKSKEVLVRDIW
Subjt:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW

Query:  VFEKSLFHEGAYWRLCGRIP
        VFEKSLFHEGA+WRLCGRIP
Subjt:  VFEKSLFHEGAYWRLCGRIP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWH6 Tim44 domain-containing protein

2.5e-100

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Query:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
        R +  LKV+MLSPGFIYEPYSPRQ +PFWQRWFTRSGW+RTKDDIILELKSAYAIAKLRKKGYSK+KFY EA NLY+EINTLIANGDKTSLRKAVTENMY
Subjt:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY

Query:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
        SALKNEIKLRESKW KVYWEMIVPVVKIRTLRAR+                IGVDR+DLEKVF+QLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
Subjt:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW

Query:  VFEKSLFHEGAYWRLCGRIP
        VFEKSLFHEGA+WRLCGRIP
Subjt:  VFEKSLFHEGAYWRLCGRIP

A0A1S3BQF5 39S ribosomal protein L45, mitochondrial isoform X2

2.5e-100

85.91

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Query:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
        R + ALKVSMLSPGFIYEPYSPRQ IPFWQRWFTRSGW+RTKDDIILELKSAYAIAKLRKKGYSK++FY EA  LYKEINTLIANGDKTSLRKAVTENMY
Subjt:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY

Query:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
        SALKNEIKLRESKW KVYWEMIVPVVKIRTLRAR+                IGVDR+DLEKVF+QLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
Subjt:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW

Query:  VFEKSLFHEGAYWRLCGRIP
        VFEKSLFHEGA+WRLCGRIP
Subjt:  VFEKSLFHEGAYWRLCGRIP

A0A6J1DZD4 uncharacterized protein LOC111025682

1.6e-107

91.4

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Query:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
        R  GALKVSMLSPGFIYEPYSPRQ IPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
Subjt:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY

Query:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
        SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARM                IGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
Subjt:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW

Query:  VFEKSLFHEGAYWRLCGRIPI
        VFEKSLFHEGAYWRLCGRIPI
Subjt:  VFEKSLFHEGAYWRLCGRIPI

A0A6J1HC62 39S ribosomal protein L45, mitochondrial isoform X1

2.3e-101

85.97

Show/hide

Query:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
        R  GALKVSMLSPG IYEPYSPRQ IPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSK++FY EAVNLYKEINTLIANGDKTSLRKAVTE MY
Subjt:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY

Query:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
        SALKNEIKLRESKW KVYWEMI+PVVKIRTLRAR+                IGVDR+DLEKVF+QLTLEILAKQKFEAYN+EGAVVAGDKSKEVLVRDIW
Subjt:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW

Query:  VFEKSLFHEGAYWRLCGRIPI
        VFEKSLFHEGA+WRLCGRIPI
Subjt:  VFEKSLFHEGAYWRLCGRIPI

A0A6J1HUF6 uncharacterized protein LOC111467908 isoform X1

4.6e-102

86.43

Show/hide

Query:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY
        R  GALKVSMLSPG IYEPYSPRQ IPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSK++FY EAVNLYKEINTLIANGDKTSLRKAVTENMY
Subjt:  RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMY

Query:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW
        SALKNEIKLRESKW KVYWEMI+PVVKIRTLRAR+                IGVDR+DLEKVF+QLTLEILAKQKFEAYN+EGAVVAGDKSKEVLVRDIW
Subjt:  SALKNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIW

Query:  VFEKSLFHEGAYWRLCGRIPI
        VFEKSLFHEGA+WRLCGRIPI
Subjt:  VFEKSLFHEGAYWRLCGRIPI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27395.1 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein

4.4e-81

66.51

Show/hide

Query:  GALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMYSAL
        GA++VSM+SPGF+YEPY+ R+ I  W+R FTRSGWRRTK+D I EL+SAYAIAKLRK GYSK  FY+EA+ LYK+IN  +ANG+K ++RK VTE MYSAL
Subjt:  GALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMYSAL

Query:  KNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIWVFE
        KNEIK RE+ W  VYWEM+ PVVKIRTL+AR+                IG+DR DL+K F+QLTLE L KQKFEAY+++G V AGDK+KEVLVRDIWVFE
Subjt:  KNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIWVFE

Query:  KSLFHEGAYWRLCGRIPI
        KSLFH GAYWRLCGRI +
Subjt:  KSLFHEGAYWRLCGRIPI

AT5G27395.2 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein

4.4e-81

66.51

Show/hide

Query:  GALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMYSAL
        GA++VSM+SPGF+YEPY+ R+ I  W+R FTRSGWRRTK+D I EL+SAYAIAKLRK GYSK  FY+EA+ LYK+IN  +ANG+K ++RK VTE MYSAL
Subjt:  GALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMYSAL

Query:  KNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIWVFE
        KNEIK RE+ W  VYWEM+ PVVKIRTL+AR+                IG+DR DL+K F+QLTLE L KQKFEAY+++G V AGDK+KEVLVRDIWVFE
Subjt:  KNEIKLRESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIWVFE

Query:  KSLFHEGAYWRLCGRIPI
        KSLFH GAYWRLCGRI +
Subjt:  KSLFHEGAYWRLCGRIPI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

CGCATGCAGGGAGCCCTTAAAGTATCCATGTTGAGTCCTGGATTCATATATGAACCTTATTCACCTCGTCAATCTATTCCATTTTGGCAAAGATGGTTCACAAGAAGTGG
TTGGAGAAGAACAAAAGATGATATCATTTTAGAGCTAAAAAGTGCTTATGCAATTGCAAAATTAAGAAAGAAGGGGTACTCAAAGCAAAAATTTTACGTAGAGGCAGTAA
ATTTATATAAAGAGATAAACACTTTGATAGCAAATGGTGACAAAACATCGTTGAGAAAAGCAGTCACAGAGAATATGTATTCAGCGTTAAAGAATGAAATCAAACTTAGG
GAATCCAAATGGAAGAAAGTTTACTGGGAAATGATTGTACCAGTTGTTAAGATCCGCACATTACGAGCTAGAATGGCAAGTACTATAATTAACTCACATTCCTGCCTATC
ATGCATTTGTAAAATTGGTGTTGATCGAAATGACCTCGAAAAGGTTTTCATGCAGCTTACACTCGAGATTCTAGCGAAGCAGAAGTTTGAAGCATATAATTCTGAAGGCG
CAGTTGTTGCGGGAGATAAATCTAAGGAGGTCCTCGTTCGCGATATATGGGTTTTTGAGAAATCTCTTTTTCATGAAGGAGCTTATTGGCGTCTCTGTGGGCGAATTCCA
ATT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

RMQGALKVSMLSPGFIYEPYSPRQSIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKQKFYVEAVNLYKEINTLIANGDKTSLRKAVTENMYSALKNEIKLR
ESKWKKVYWEMIVPVVKIRTLRARMASTIINSHSCLSCICKIGVDRNDLEKVFMQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAYWRLCGRIP
I

MS020218 (gene) of Bitter gourd (TR) v1 genome