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MS020222 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020222
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description39S ribosomal protein L45, mitochondrial isoform X1
Genome locationscaffold665:163190..163459
RNA-Seq ExpressionMS020222
SyntenyMS020222
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10219.1 39S ribosomal protein L45 [Cucumis melo var. makuwa]2.2e-1378.69Show/hide
Query:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSHGI--RLVTTQAKAPPQVRQ
        SQLGIQKTSSFLSNS +AF L RGHK  + SAVAAE S+FSHGI  RLVTTQAKAPPQ RQ
Subjt:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSHGI--RLVTTQAKAPPQVRQ

XP_004135632.1 uncharacterized protein LOC101211143 isoform X1 [Cucumis sativus]4.8e-1378.69Show/hide
Query:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSH--GIRLVTTQAKAPPQVRQ
        SQLGIQKTSSFLSNS +AF L RGHK  I SAVAAE S+FSH  GIRLVTTQ KAPPQ RQ
Subjt:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSH--GIRLVTTQAKAPPQVRQ

XP_008450683.1 PREDICTED: 39S ribosomal protein L45, mitochondrial isoform X1 [Cucumis melo]2.2e-1378.69Show/hide
Query:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSHGI--RLVTTQAKAPPQVRQ
        SQLGIQKTSSFLSNS +AF L RGHK  + SAVAAE S+FSHGI  RLVTTQAKAPPQ RQ
Subjt:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSHGI--RLVTTQAKAPPQVRQ

XP_022159272.1 uncharacterized protein LOC111025682 [Momordica charantia]6.2e-2198.28Show/hide
Query:  SQLGIQKTSSFLSNSQTAFPLPRGHKISSAVAAELSIFSHGIRLVTTQAKAPPQVRQM
        SQLGIQKTSSFLSNSQTAFPLPRGHKISSAVAAELSIFSHGIR VTTQAKAPPQVRQM
Subjt:  SQLGIQKTSSFLSNSQTAFPLPRGHKISSAVAAELSIFSHGIRLVTTQAKAPPQVRQM

XP_038879465.1 uncharacterized protein LOC120071330 isoform X1 [Benincasa hispida]2.5e-1482.26Show/hide
Query:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSHG--IRLVTTQAKAPPQVRQM
        SQLGIQKTSSFLSNS+TAF L RGHK  ISSAVAAE  +FSH   IRLVTTQAKAPPQVRQM
Subjt:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSHG--IRLVTTQAKAPPQVRQM

TrEMBL top hitse value%identityAlignment
A0A0A0LWH6 Tim44 domain-containing protein2.3e-1378.69Show/hide
Query:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSH--GIRLVTTQAKAPPQVRQ
        SQLGIQKTSSFLSNS +AF L RGHK  I SAVAAE S+FSH  GIRLVTTQ KAPPQ RQ
Subjt:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSH--GIRLVTTQAKAPPQVRQ

A0A1S3BPQ8 39S ribosomal protein L45, mitochondrial isoform X11.0e-1378.69Show/hide
Query:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSHGI--RLVTTQAKAPPQVRQ
        SQLGIQKTSSFLSNS +AF L RGHK  + SAVAAE S+FSHGI  RLVTTQAKAPPQ RQ
Subjt:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSHGI--RLVTTQAKAPPQVRQ

A0A5D3CJ04 39S ribosomal protein L451.0e-1378.69Show/hide
Query:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSHGI--RLVTTQAKAPPQVRQ
        SQLGIQKTSSFLSNS +AF L RGHK  + SAVAAE S+FSHGI  RLVTTQAKAPPQ RQ
Subjt:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSHGI--RLVTTQAKAPPQVRQ

A0A6J1DZD4 uncharacterized protein LOC1110256823.0e-2198.28Show/hide
Query:  SQLGIQKTSSFLSNSQTAFPLPRGHKISSAVAAELSIFSHGIRLVTTQAKAPPQVRQM
        SQLGIQKTSSFLSNSQTAFPLPRGHKISSAVAAELSIFSHGIR VTTQAKAPPQVRQM
Subjt:  SQLGIQKTSSFLSNSQTAFPLPRGHKISSAVAAELSIFSHGIRLVTTQAKAPPQVRQM

A0A6J1HZ27 uncharacterized protein LOC111467908 isoform X22.0e-1279.03Show/hide
Query:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSH--GIRLVTTQAKAPPQVRQM
        SQLGIQKT SFLSN+ TAF L RGHK  I SAVAA+LSIFSH  GIRL TTQAKAPPQ RQM
Subjt:  SQLGIQKTSSFLSNSQTAFPLPRGHK--ISSAVAAELSIFSH--GIRLVTTQAKAPPQVRQM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTCAATTGGGTATTCAGAAAACTTCTTCTTTCCTCAGTAACAGTCAAACTGCGTTTCCACTGCCTCGAGGACATAAAATAAGTTCTGCAGTGGCTGCTGAGTTATCAAT
CTTCTCACATGGCATTAGGTTGGTGACGACACAAGCAAAGGCCCCTCCACAAGTACGGCAAATG
mRNA sequenceShow/hide mRNA sequence
AGTCAATTGGGTATTCAGAAAACTTCTTCTTTCCTCAGTAACAGTCAAACTGCGTTTCCACTGCCTCGAGGACATAAAATAAGTTCTGCAGTGGCTGCTGAGTTATCAAT
CTTCTCACATGGCATTAGGTTGGTGACGACACAAGCAAAGGCCCCTCCACAAGTACGGCAAATG
Protein sequenceShow/hide protein sequence
SQLGIQKTSSFLSNSQTAFPLPRGHKISSAVAAELSIFSHGIRLVTTQAKAPPQVRQM