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MS020232 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020232
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDefensin-like (DEFL) family protein
Genome locationscaffold665:251480..251647
RNA-Seq ExpressionMS020232
SyntenyMS020232
Gene Ontology termsGO:0050832 - defense response to fungus (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR022618 - Defensin-like protein 20-27


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66133.1 hypothetical protein Csa_007601 [Cucumis sativus]7.1e-1459.02Show/hide
Query:  FTGSLNTSAQLCCKDHPDFGGCNPD-----DGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        + GS+NT+AQLCC +H + G C P      DG+C  HCI GCE+GGFCKK+  GHVCHCYC
Subjt:  FTGSLNTSAQLCCKDHPDFGGCNPD-----DGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
KGN66136.1 hypothetical protein Csa_007074 [Cucumis sativus]2.1e-1355.74Show/hide
Query:  FTGSLNTSAQLCCKDHPDFGGC-----NPDDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        ++GS+NT+AQLCC +HP+ G C     + +DG+C  HCI+GCEKGGFCK +   +VCHCYC
Subjt:  FTGSLNTSAQLCCKDHPDFGGC-----NPDDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
TYK10190.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]7.1e-1457.38Show/hide
Query:  FTGSLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        ++GS NT+AQLCC +HP+ G C P      DG+C  HCI+GCEKGGFCK++   +VCHCYC
Subjt:  FTGSLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
TYK10191.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]4.6e-1358.62Show/hide
Query:  SLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        S NT+AQLCC +HP+ G C P      DG+C  HCI+GCEKGGFCK++   +VCHCYC
Subjt:  SLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
TYK10192.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]5.5e-1465.52Show/hide
Query:  SLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        SLNT+AQLCC +HP++G C P      DGRC   CI GCEKGGFCK+VG  HVCHCYC
Subjt:  SLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
TrEMBL top hitse value%identityAlignment
A0A0A0LWJ9 Uncharacterized protein3.5e-1459.02Show/hide
Query:  FTGSLNTSAQLCCKDHPDFGGCNPD-----DGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        + GS+NT+AQLCC +H + G C P      DG+C  HCI GCE+GGFCKK+  GHVCHCYC
Subjt:  FTGSLNTSAQLCCKDHPDFGGCNPD-----DGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
A0A0A0LYL5 Uncharacterized protein4.1e-1562.3Show/hide
Query:  FTGSLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        ++GSLNT+AQLCC +HP++G C P      DGRC   CI GCEKGG CK+VG  HVCHCYC
Subjt:  FTGSLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
A0A0A0M1N0 Uncharacterized protein1.0e-1355.74Show/hide
Query:  FTGSLNTSAQLCCKDHPDFGGC-----NPDDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        ++GS+NT+AQLCC +HP+ G C     + +DG+C  HCI+GCEKGGFCK +   +VCHCYC
Subjt:  FTGSLNTSAQLCCKDHPDFGGC-----NPDDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
A0A5D3CFQ3 Putative defensin-like protein 203.5e-1457.38Show/hide
Query:  FTGSLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        ++GS NT+AQLCC +HP+ G C P      DG+C  HCI+GCEKGGFCK++   +VCHCYC
Subjt:  FTGSLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
A0A5D3CG20 Putative defensin-like protein 202.6e-1465.52Show/hide
Query:  SLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        SLNT+AQLCC +HP++G C P      DGRC   CI GCEKGGFCK+VG  HVCHCYC
Subjt:  SLNTSAQLCCKDHPDFGGCNP-----DDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
SwissProt top hitse value%identityAlignment
Q2L6T3 Putative defensin-like protein 273.2e-0949.06Show/hide
Query:  SLNTSAQLCCKDHPDFGGCNPDDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        S N    LCC DHP+FG C   +  CN  C+ GC +GGFCK+     +CHCYC
Subjt:  SLNTSAQLCCKDHPDFGGCNPDDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
Q2V391 Defensin-like protein 223.4e-1149.12Show/hide
Query:  SLNTSAQLCCKDHPDFGGCNP--DDGRCNTHCISGCE--KGGFCKKVGGGHVCHCYC
        ++     LCC +HP FG CN   DD RCN+ C++GC+  KGG+CK +  G  CHCYC
Subjt:  SLNTSAQLCCKDHPDFGGCNP--DDGRCNTHCISGCE--KGGFCKKVGGGHVCHCYC
Q2V4J2 Putative defensin-like protein 266.7e-0743.86Show/hide
Query:  SLNTSAQLCCKDHPDFGGCNP--DDGRCNTHCISGC--EKGGFCKKVGGGHVCHCYC
        ++ +   LCC  HP FG CN   D+ RCN  C +GC   KGG+ K +  G  CH YC
Subjt:  SLNTSAQLCCKDHPDFGGCNP--DDGRCNTHCISGC--EKGGFCKKVGGGHVCHCYC
Arabidopsis top hitse value%identityAlignment
AT1G33607.1 Defensin-like (DEFL) family protein4.8e-0843.86Show/hide
Query:  SLNTSAQLCCKDHPDFGGCNP--DDGRCNTHCISGC--EKGGFCKKVGGGHVCHCYC
        ++ +   LCC  HP FG CN   D+ RCN  C +GC   KGG+ K +  G  CH YC
Subjt:  SLNTSAQLCCKDHPDFGGCNP--DDGRCNTHCISGC--EKGGFCKKVGGGHVCHCYC
AT4G18823.1 Defensin-like (DEFL) family protein2.3e-1049.06Show/hide
Query:  SLNTSAQLCCKDHPDFGGCNPDDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
        S N    LCC DHP+FG C   +  CN  C+ GC +GGFCK+     +CHCYC
Subjt:  SLNTSAQLCCKDHPDFGGCNPDDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC
AT5G08315.1 Defensin-like (DEFL) family protein2.4e-1249.12Show/hide
Query:  SLNTSAQLCCKDHPDFGGCNP--DDGRCNTHCISGCE--KGGFCKKVGGGHVCHCYC
        ++     LCC +HP FG CN   DD RCN+ C++GC+  KGG+CK +  G  CHCYC
Subjt:  SLNTSAQLCCKDHPDFGGCNP--DDGRCNTHCISGCE--KGGFCKKVGGGHVCHCYC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTACAGGGAGTTTGAACACAAGTGCTCAATTGTGTTGCAAAGACCATCCCGACTTTGGGGGCTGCAACCCAGACGATGGCAGGTGCAACACTCACTGCATTTCTGGCTG
TGAAAAAGGAGGATTTTGCAAGAAAGTTGGGGGTGGCCATGTCTGCCATTGCTATTGC
mRNA sequenceShow/hide mRNA sequence
TTTACAGGGAGTTTGAACACAAGTGCTCAATTGTGTTGCAAAGACCATCCCGACTTTGGGGGCTGCAACCCAGACGATGGCAGGTGCAACACTCACTGCATTTCTGGCTG
TGAAAAAGGAGGATTTTGCAAGAAAGTTGGGGGTGGCCATGTCTGCCATTGCTATTGC
Protein sequenceShow/hide protein sequence
FTGSLNTSAQLCCKDHPDFGGCNPDDGRCNTHCISGCEKGGFCKKVGGGHVCHCYC