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MS020233 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020233
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDefensin-like family protein, putative
Genome locationscaffold665:256609..256815
RNA-Seq ExpressionMS020233
SyntenyMS020233
Gene Ontology termsGO:0050832 - defense response to fungus (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR022618 - Defensin-like protein 20-27


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653392.1 hypothetical protein Csa_007412 [Cucumis sativus]1.9e-1657.97Show/hide
Query:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        G+L A+  +CCNN P LG CKPG+DD    S + NGKCW  C SGC KGGFCK++  G +  HVCHCYC
Subjt:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

KGN66133.1 hypothetical protein Csa_007601 [Cucumis sativus]2.3e-1452.17Show/hide
Query:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        GS+  + +LCCNN+ +LG C PG+DD      + +GKCW HCI GC +GGFCK++  G    HVCHCYC
Subjt:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

KGN66136.1 hypothetical protein Csa_007074 [Cucumis sativus]1.0e-1452.17Show/hide
Query:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        GS+  + +LCCNN+P+LG+C+ G+DD        +GKCW HCI+GC KGGFCK +    S  +VCHCYC
Subjt:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

TYK10190.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]3.6e-1553.62Show/hide
Query:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        GS   + +LCCNN+P+LG C+PG+DD        +GKCW HCI+GC KGGFCKQ+    +  +VCHCYC
Subjt:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

TYK10191.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]6.1e-1554.41Show/hide
Query:  SLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        S   + +LCCNN+P+LG C+PG+DD        +GKCW HCI+GC KGGFCKQ+    S  +VCHCYC
Subjt:  SLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

TrEMBL top hitse value%identityAlignment
A0A0A0LW61 Uncharacterized protein9.2e-1757.97Show/hide
Query:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        G+L A+  +CCNN P LG CKPG+DD    S + NGKCW  C SGC KGGFCK++  G +  HVCHCYC
Subjt:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

A0A0A0LZ58 Uncharacterized protein9.2e-1757.97Show/hide
Query:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        G+L A+  +CCNN P LG CKPG+DD    S + NGKCW  C SGC KGGFCK++  G +  HVCHCYC
Subjt:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

A0A0A0M1N0 Uncharacterized protein5.0e-1552.17Show/hide
Query:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        GS+  + +LCCNN+P+LG+C+ G+DD        +GKCW HCI+GC KGGFCK +    S  +VCHCYC
Subjt:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

A0A5D3CEJ1 Putative defensin-like protein 203.0e-1554.41Show/hide
Query:  SLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        S   + +LCCNN+P+LG C+PG+DD        +GKCW HCI+GC KGGFCKQ+    S  +VCHCYC
Subjt:  SLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

A0A5D3CFQ3 Putative defensin-like protein 201.7e-1553.62Show/hide
Query:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        GS   + +LCCNN+P+LG C+PG+DD        +GKCW HCI+GC KGGFCKQ+    +  +VCHCYC
Subjt:  GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

SwissProt top hitse value%identityAlignment
Q2L6T3 Putative defensin-like protein 272.7e-0536.07Show/hide
Query:  LCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        LCCN++P+ G C              N  C   C+ GC +GGFCK+         +CHCYC
Subjt:  LCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC

Arabidopsis top hitse value%identityAlignment
AT4G18823.1 Defensin-like (DEFL) family protein1.9e-0636.07Show/hide
Query:  LCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC
        LCCN++P+ G C              N  C   C+ GC +GGFCK+         +CHCYC
Subjt:  LCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAGTTTGAAGGCAAGCACTGAGTTGTGCTGCAATAACTATCCAAAACTGGGGGACTGCAAGCCAGGAATAGACGACTGGCATGGTACTAGCAGTGAGGAGAATGGCAA
GTGCTGGAGTCATTGCATTTCAGGATGCCTAAAAGGAGGATTCTGCAAGCAAATTATATTGGGTGGCTCAACCACCCATGTCTGCCATTGTTATTGT
mRNA sequenceShow/hide mRNA sequence
GGAAGTTTGAAGGCAAGCACTGAGTTGTGCTGCAATAACTATCCAAAACTGGGGGACTGCAAGCCAGGAATAGACGACTGGCATGGTACTAGCAGTGAGGAGAATGGCAA
GTGCTGGAGTCATTGCATTTCAGGATGCCTAAAAGGAGGATTCTGCAAGCAAATTATATTGGGTGGCTCAACCACCCATGTCTGCCATTGTTATTGT
Protein sequenceShow/hide protein sequence
GSLKASTELCCNNYPKLGDCKPGIDDWHGTSSEENGKCWSHCISGCLKGGFCKQIILGGSTTHVCHCYC