; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020237 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020237
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear transcription factor Y protein
Genome locationscaffold665:301185..301964
RNA-Seq ExpressionMS020237
SyntenyMS020237
Gene Ontology termsGO:0006465 - signal peptide processing (biological process)
GO:0007264 - small GTPase mediated signal transduction (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005787 - signal peptidase complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0005092 - GDP-dissociation inhibitor activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450660.1 PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo]5.7e-13094.62Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
        MDQQGHGQ PSMGAVGSGGQ+AYGSNLYHP+QM VGPTSGSVVTSVGGIQSTSQP GAQLAQHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFK
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG +TVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        GPGD LPY YMPSQHAPQVGAPGMIMGKPVMDP MYA QSHPYM PQMWQHAQDQAPP+Q
Subjt:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

XP_022157074.1 nuclear transcription factor Y subunit C-9 [Momordica charantia]2.1e-14099.62Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
        MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG ITVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
Subjt:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

XP_022933523.1 nuclear transcription factor Y subunit C-9-like [Cucurbita moschata]2.2e-13495.38Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
        MDQQGHGQP SMGAVGSGGQ+AYGSNLYHP Q+TVG TSGSVVTSVGGIQSTSQP GAQL QHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG ITVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDP +YAQQSHPYMPPQMWQH QDQAPP+Q
Subjt:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

XP_031735973.1 nuclear transcription factor Y subunit C-9 [Cucumis sativus]2.1e-13295Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
        MDQQGHGQPPSMGAVGSGGQ+AYGSNLYHP+QM+VGPTSGSVVTSVGGIQSTSQP GAQLAQHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFK
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG +TVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        GPGD LPY YMPSQHAPQVGAPGMIMGKPVMDP MYA QSHPYM PQMWQHAQDQAPP+Q
Subjt:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

XP_038879069.1 nuclear transcription factor Y subunit C-9 [Benincasa hispida]1.3e-13797.31Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
        MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQP GAQLAQHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFK
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG +TVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        GPG+ALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYA QSHPYMPPQMWQHAQDQAPP+Q
Subjt:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

TrEMBL top hitse value%identityAlignment
A0A0A0LW22 CBFD_NFYB_HMF domain-containing protein1.0e-13295Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
        MDQQGHGQPPSMGAVGSGGQ+AYGSNLYHP+QM+VGPTSGSVVTSVGGIQSTSQP GAQLAQHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFK
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG +TVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        GPGD LPY YMPSQHAPQVGAPGMIMGKPVMDP MYA QSHPYM PQMWQHAQDQAPP+Q
Subjt:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

A0A1S3BQR3 nuclear transcription factor Y subunit C-92.7e-13094.62Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
        MDQQGHGQ PSMGAVGSGGQ+AYGSNLYHP+QM VGPTSGSVVTSVGGIQSTSQP GAQLAQHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFK
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG +TVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        GPGD LPY YMPSQHAPQVGAPGMIMGKPVMDP MYA QSHPYM PQMWQHAQDQAPP+Q
Subjt:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

A0A6J1DS47 nuclear transcription factor Y subunit C-91.0e-14099.62Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
        MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG ITVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
Subjt:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

A0A6J1F001 nuclear transcription factor Y subunit C-9-like1.1e-13495.38Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
        MDQQGHGQP SMGAVGSGGQ+AYGSNLYHP Q+TVG TSGSVVTSVGGIQSTSQP GAQL QHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG ITVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDP +YAQQSHPYMPPQMWQH QDQAPP+Q
Subjt:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

A0A6J1HZ39 nuclear transcription factor Y subunit C-9-like1.1e-13495.38Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
        MDQQGHGQP SMGAVGSGGQ+AYGSNLYHP Q+TVG TSGSVVTSVGGIQSTSQP GAQL QHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG ITVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDP +YAQQSHPYMPPQMWQH QDQAPP+Q
Subjt:  GPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-41.8e-5454.47Show/hide
Query:  PSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQ--LAQHQLAY---QHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSL
        P++G V +GG   Y +  Y P+     PT+ +V+ + G   + S P+      AQHQL Y   Q  HQQ QQQ Q+QLQ FWA +  +IE+ TDFKNHSL
Subjt:  PSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQ--LAQHQLAY---QHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSL

Query:  PLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGD
        PLARIKKIMKADEDVRMISAEAPV+FA+ACE+FILELTLRSW HTEENKRRTLQKNDIAAAITRTD++DFLVDIVPR+DLK+E +     G   +G P D
Subjt:  PLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGD

Query:  ALPY-CYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        + PY  Y+P Q  P  G                 QQ HP    Q  Q  Q++ P EQ
Subjt:  ALPY-CYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

Q8L4B2 Nuclear transcription factor Y subunit C-91.3e-6861.3Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDF
        MDQQ HGQ          G M YG+N Y        P S +  T  GG    +QP        QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDF
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDF

Query:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV
        KNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRG +  
Subjt:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV

Query:  GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
               PY Y+P+  AP +G PGM+MG P       A   +PYM   MWQ      P ++
Subjt:  GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

Q9FMV5 Nuclear transcription factor Y subunit C-44.9e-5257.46Show/hide
Query:  SNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISA
        +N   P   +V P  GS VT+V  I      S + +      Y H+ QQQQQQLQ     FW  Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISA
Subjt:  SNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISA

Query:  EAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV-LTSIPRGPITVGGPGDALPYCYMPSQHAPQVGAPG
        EAP+LFA+ACE+FILELT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE++K+E    S   G   V      +PY Y P       G  G
Subjt:  EAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV-LTSIPRGPITVGGPGDALPYCYMPSQHAPQVGAPG

Query:  MIMGKPVMDPT-MYAQQSHPYMPPQMWQ
        M++G+P MDP+ +YAQ      P Q WQ
Subjt:  MIMGKPVMDPT-MYAQQSHPYMPPQMWQ

Q9SMP0 Nuclear transcription factor Y subunit C-15.8e-5357.67Show/hide
Query:  PTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEM
        P  G+ +++ GG        GA       +Y H+ QQQ    QQQLQ FW  Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+
Subjt:  PTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEM

Query:  FILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPT-M
        FILELT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+++KDE   ++  G + V      +PY Y P       G  GM++G+P MDP  +
Subjt:  FILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPT-M

Query:  YAQQSHPYMPPQMWQ
        Y Q      P Q WQ
Subjt:  YAQQSHPYMPPQMWQ

Q9ZVL3 Nuclear transcription factor Y subunit C-36.6e-6560.24Show/hide
Query:  MGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKK
        M   G    M YGSN Y  + MT  PT                           AY  IHQQQQQQL QQLQ+FW  Q++EIEK TDFKNHSLPLARIKK
Subjt:  MGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKK

Query:  IMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDALPYCYM
        IMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL  +     T  G     PY Y+
Subjt:  IMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDALPYCYM

Query:  PSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        P   AP +G PGM+MG P   P       +PYM   MWQ    Q  PEQ
Subjt:  PSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C99.2e-7061.3Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDF
        MDQQ HGQ          G M YG+N Y        P S +  T  GG    +QP        QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDF
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDF

Query:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV
        KNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRG +  
Subjt:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV

Query:  GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
               PY Y+P+  AP +G PGM+MG P       A   +PYM   MWQ      P ++
Subjt:  GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

AT1G08970.2 nuclear factor Y, subunit C99.2e-7061.3Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDF
        MDQQ HGQ          G M YG+N Y        P S +  T  GG    +QP        QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDF
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDF

Query:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV
        KNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRG +  
Subjt:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV

Query:  GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
               PY Y+P+  AP +G PGM+MG P       A   +PYM   MWQ      P ++
Subjt:  GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

AT1G08970.3 nuclear factor Y, subunit C99.2e-7061.3Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDF
        MDQQ HGQ          G M YG+N Y        P S +  T  GG    +QP        QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDF
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDF

Query:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV
        KNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRG +  
Subjt:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV

Query:  GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
               PY Y+P+  AP +G PGM+MG P       A   +PYM   MWQ      P ++
Subjt:  GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

AT1G08970.4 nuclear factor Y, subunit C99.2e-7061.3Show/hide
Query:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDF
        MDQQ HGQ          G M YG+N Y        P S +  T  GG    +QP        QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDF
Subjt:  MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEKVTDF

Query:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV
        KNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRG +  
Subjt:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV

Query:  GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
               PY Y+P+  AP +G PGM+MG P       A   +PYM   MWQ      P ++
Subjt:  GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ

AT1G54830.2 nuclear factor Y, subunit C34.7e-6660.24Show/hide
Query:  MGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKK
        M   G    M YGSN Y  + MT  PT                           AY  IHQQQQQQL QQLQ+FW  Q++EIEK TDFKNHSLPLARIKK
Subjt:  MGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKK

Query:  IMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDALPYCYM
        IMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL  +     T  G     PY Y+
Subjt:  IMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDALPYCYM

Query:  PSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ
        P   AP +G PGM+MG P   P       +PYM   MWQ    Q  PEQ
Subjt:  PSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAACAAGGGCATGGCCAGCCTCCATCGATGGGAGCAGTTGGCAGTGGAGGTCAGATGGCATATGGTAGCAACCTGTACCATCCTAGTCAAATGACTGTAGGTCC
GACTTCTGGATCTGTTGTTACATCGGTAGGAGGTATTCAGTCTACGAGCCAACCCAGCGGAGCTCAGCTTGCTCAACACCAACTTGCTTATCAGCATATCCACCAGCAGC
AACAACAGCAACTTCAACAGCAGCTCCAGACATTTTGGGCAAATCAGTACCAAGAGATCGAAAAGGTAACCGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAG
AAGATCATGAAGGCTGACGAGGATGTACGAATGATATCGGCTGAGGCACCAGTTTTATTTGCTAGGGCATGTGAAATGTTCATCTTGGAATTGACTTTACGGTCTTGGAA
CCATACCGAAGAGAACAAACGCAGGACGCTTCAGAAGAACGATATTGCTGCAGCCATCACAAGAACTGACATTTTTGACTTTCTGGTTGATATTGTGCCGAGGGAAGATC
TGAAAGACGAAGTACTCACATCAATCCCGAGAGGACCAATAACCGTTGGGGGGCCTGGAGATGCACTTCCTTATTGCTATATGCCGTCTCAACATGCACCTCAGGTTGGG
GCCCCTGGGATGATTATGGGCAAGCCAGTGATGGACCCAACAATGTATGCTCAACAATCTCACCCTTACATGCCTCCACAAATGTGGCAGCATGCACAAGATCAAGCCCC
TCCCGAGCAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAACAAGGGCATGGCCAGCCTCCATCGATGGGAGCAGTTGGCAGTGGAGGTCAGATGGCATATGGTAGCAACCTGTACCATCCTAGTCAAATGACTGTAGGTCC
GACTTCTGGATCTGTTGTTACATCGGTAGGAGGTATTCAGTCTACGAGCCAACCCAGCGGAGCTCAGCTTGCTCAACACCAACTTGCTTATCAGCATATCCACCAGCAGC
AACAACAGCAACTTCAACAGCAGCTCCAGACATTTTGGGCAAATCAGTACCAAGAGATCGAAAAGGTAACCGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAG
AAGATCATGAAGGCTGACGAGGATGTACGAATGATATCGGCTGAGGCACCAGTTTTATTTGCTAGGGCATGTGAAATGTTCATCTTGGAATTGACTTTACGGTCTTGGAA
CCATACCGAAGAGAACAAACGCAGGACGCTTCAGAAGAACGATATTGCTGCAGCCATCACAAGAACTGACATTTTTGACTTTCTGGTTGATATTGTGCCGAGGGAAGATC
TGAAAGACGAAGTACTCACATCAATCCCGAGAGGACCAATAACCGTTGGGGGGCCTGGAGATGCACTTCCTTATTGCTATATGCCGTCTCAACATGCACCTCAGGTTGGG
GCCCCTGGGATGATTATGGGCAAGCCAGTGATGGACCCAACAATGTATGCTCAACAATCTCACCCTTACATGCCTCCACAAATGTGGCAGCATGCACAAGATCAAGCCCC
TCCCGAGCAA
Protein sequenceShow/hide protein sequence
MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIK
KIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDALPYCYMPSQHAPQVG
APGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQAPPEQ