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MS020261 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020261
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR6-like
Genome locationscaffold665:540521..540823
RNA-Seq ExpressionMS020261
SyntenyMS020261
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578666.1 Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. sororia]8.8e-2367.31Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKH-DDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF
        MG SKKSQ+DG  E EGKKWV+A L AR+S  PI TKSRAK  +D  +KS STTP  KEA+IPEKLS P A RKRR L S+SN N+ REF NPPDLESVF
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKH-DDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF

Query:  KLQV
        K++V
Subjt:  KLQV

KAG7016206.1 Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-2367.31Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKH-DDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF
        MG SKKSQ+DG  E EGKKWV+A L AR+S  PI TKSRAK  +D  +KS STTP  KEA+IPEKLS P A RKRR L S+SN N+ REF NPPDLESVF
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKH-DDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF

Query:  KLQV
        K++V
Subjt:  KLQV

XP_022993176.1 cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita maxima]1.4e-2368.27Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHDDGD-DKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF
        MG SKKSQ+DG LE+EGKKWV+A L AR+S  PI TKSRAK  + D +KS STTP  KEA+IPEKLS P A RKRR L S+SN N+ REF NPPDLESVF
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHDDGD-DKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF

Query:  KLQV
        K++V
Subjt:  KLQV

XP_023550994.1 cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita pepo subsp. pepo]3.0e-2368.27Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKH-DDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF
        MG SKKSQ+DG  E EGKKWV+A L AR+S  PI TKSRAK  DD  +KS STTP  KEA+IPEKLS P A RKRR L S+SN N+ REF NPPDLESVF
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKH-DDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF

Query:  KLQV
        K++V
Subjt:  KLQV

XP_038890813.1 cyclin-dependent protein kinase inhibitor SMR6 [Benincasa hispida]2.6e-2266.02Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVFK
        MG SKKSQ+DG  E+EGKKWV+A L  R+S  PI TKS+AK  DG+D     TP  KEA+IPEKL  PPA RKRR L S+SN NY+REF NPPDLESVFK
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVFK

Query:  LQV
        L+V
Subjt:  LQV

TrEMBL top hitse value%identityAlignment
A0A067LD61 Uncharacterized protein3.4e-2055.66Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAK---HDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLIS--NSNNYVREFLNPPDLES
        MG SKK+Q+D  L+SEGKKWV+A +  R S  PI TK R K     + +++ CSTTP  KEA+IPE+L  PPA ++R  +S  N NN VREF NPPDLES
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAK---HDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLIS--NSNNYVREFLNPPDLES

Query:  VFKLQV
        VFK  V
Subjt:  VFKLQV

A0A2C9UG96 Uncharacterized protein5.2e-2159.22Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAK-HDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSN-NYVREFLNPPDLESVFK
        MG SKK+Q+D  L+SEGKKWV+A +  R S  PI TK R K  DDGD++ CSTTP  KEA+IPE+L  PPA ++R   S  N N VREF  PPDLESVFK
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAK-HDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSN-NYVREFLNPPDLESVFK

Query:  LQV
          V
Subjt:  LQV

A0A6J1FHD8 cyclin-dependent protein kinase inhibitor SMR68.0e-2265.38Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKH-DDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF
        MG SKKSQ+DG  E EGKKWV+A L AR+S  PI TK RAK  +D  +KS STTP  KEA+IPEKL  P A RKRR L S+SN N+ REF NPPDLESVF
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKH-DDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF

Query:  KLQV
        K++V
Subjt:  KLQV

A0A6J1JVL3 cyclin-dependent protein kinase inhibitor SMR6-like6.6e-2468.27Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHDDGD-DKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF
        MG SKKSQ+DG LE+EGKKWV+A L AR+S  PI TKSRAK  + D +KS STTP  KEA+IPEKLS P A RKRR L S+SN N+ REF NPPDLESVF
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHDDGD-DKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSN-NYVREFLNPPDLESVF

Query:  KLQV
        K++V
Subjt:  KLQV

B9S646 Uncharacterized protein2.0e-2057.55Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAK----HDDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSNNYVREFLNPPDLES
        MG SKKSQ+D  L+SEGKKWV+A +  R S  PI T+ RAK     DD +++ CSTTP  KE++IPE+L  PPA RKRR    N N+ VREF +PPDLES
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAK----HDDGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSNNYVREFLNPPDLES

Query:  VFKLQV
        VFK  V
Subjt:  VFKLQV

SwissProt top hitse value%identityAlignment
Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR153.2e-0736.63Show/hide
Query:  MGLSKKSQMDGDLE----SEGKKWVMARLLARASF-PIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSNNYVREFLNPPDLESV
        MG S K+    D +    +EGKK V+  +   ++  PI   S A  +  D+  C TTP     +IP  +  PPA K+R L    +   REF +PPDLE+V
Subjt:  MGLSKKSQMDGDLE----SEGKKWVMARLLARASF-PIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSNNYVREFLNPPDLESV

Query:  F
        F
Subjt:  F

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR61.4e-1852.78Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHD---------DGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSNNYVREFLNP
        MG SKKSQ +G LES+GKKWV+A +  RAS  P+KTK RA  +           +++ CSTTP  KE KIPE L  PPA RKRR  +   +N VREF  P
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHD---------DGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSNNYVREFLNP

Query:  P-DLESVF
        P DLE+VF
Subjt:  P-DLESVF

Q9LVX6 Cyclin-dependent protein kinase inhibitor SMR72.2e-0840.82Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSNNYVREFLNPP-DLESVF
        MG+SKKSQ+  +L+++GKK++ A+   RAS  P+KTK      + +D  C  TP  + AK PE  ++P  RKR  ++   NN   E+  PP D E VF
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSNNYVREFLNPP-DLESVF

Arabidopsis top hitse value%identityAlignment
AT1G60783.1 unknown protein2.2e-0836.63Show/hide
Query:  MGLSKKSQMDGDLE----SEGKKWVMARLLARASF-PIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSNNYVREFLNPPDLESV
        MG S K+    D +    +EGKK V+  +   ++  PI   S A  +  D+  C TTP     +IP  +  PPA K+R L    +   REF +PPDLE+V
Subjt:  MGLSKKSQMDGDLE----SEGKKWVMARLLARASF-PIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSNNYVREFLNPPDLESV

Query:  F
        F
Subjt:  F

AT3G27630.1 unknown protein1.6e-0940.82Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSNNYVREFLNPP-DLESVF
        MG+SKKSQ+  +L+++GKK++ A+   RAS  P+KTK      + +D  C  TP  + AK PE  ++P  RKR  ++   NN   E+  PP D E VF
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSNNYVREFLNPP-DLESVF

AT5G40460.1 unknown protein9.7e-2052.78Show/hide
Query:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHD---------DGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSNNYVREFLNP
        MG SKKSQ +G LES+GKKWV+A +  RAS  P+KTK RA  +           +++ CSTTP  KE KIPE L  PPA RKRR  +   +N VREF  P
Subjt:  MGLSKKSQMDGDLESEGKKWVMARLLARASF-PIKTKSRAKHD---------DGDDKSCSTTPPVKEAKIPEKLSSPPA-RKRRFLISNSNNYVREFLNP

Query:  P-DLESVF
        P DLE+VF
Subjt:  P-DLESVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTATCGAAAAAGTCCCAAATGGACGGCGACTTGGAATCGGAAGGGAAAAAATGGGTAATGGCCAGGTTGCTGGCGAGAGCGTCGTTCCCAATAAAGACGAAATC
GAGGGCGAAACACGACGACGGCGACGATAAATCGTGTTCGACAACGCCGCCGGTGAAGGAAGCGAAAATACCAGAGAAACTAAGTTCTCCGCCGGCGAGGAAGCGCAGAT
TTCTAATATCAAACTCTAACAATTATGTCAGAGAGTTCTTAAATCCTCCCGATTTAGAATCTGTCTTCAAGCTCCAAGTT
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTATCGAAAAAGTCCCAAATGGACGGCGACTTGGAATCGGAAGGGAAAAAATGGGTAATGGCCAGGTTGCTGGCGAGAGCGTCGTTCCCAATAAAGACGAAATC
GAGGGCGAAACACGACGACGGCGACGATAAATCGTGTTCGACAACGCCGCCGGTGAAGGAAGCGAAAATACCAGAGAAACTAAGTTCTCCGCCGGCGAGGAAGCGCAGAT
TTCTAATATCAAACTCTAACAATTATGTCAGAGAGTTCTTAAATCCTCCCGATTTAGAATCTGTCTTCAAGCTCCAAGTT
Protein sequenceShow/hide protein sequence
MGLSKKSQMDGDLESEGKKWVMARLLARASFPIKTKSRAKHDDGDDKSCSTTPPVKEAKIPEKLSSPPARKRRFLISNSNNYVREFLNPPDLESVFKLQV