; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020278 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020278
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold665:688974..689351
RNA-Seq ExpressionMS020278
SyntenyMS020278
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571514.1 hypothetical protein SDJN03_28242, partial [Cucurbita argyrosperma subsp. sororia]7.9e-5382.54Show/hide
Query:  RQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGK-K
        R I+EFRTPQHPS+ KNNWGGASPLLARNIPH+TLELRYL LNS+RTRDEIFPL  +DD  SYYLPVSY PRLQRLEKS+ +K SSFLSKLSLPWRGK K
Subjt:  RQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGK-K

Query:  TLLGSNSRKKWFTRWDYQNRWPQGWC
        TL G NSRKKWF  WDYQNRWPQGWC
Subjt:  TLLGSNSRKKWFTRWDYQNRWPQGWC

KGN57931.1 hypothetical protein Csa_009875 [Cucumis sativus]2.3e-5278.74Show/hide
Query:  RQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQR-LEKSKNMKRSSFLSKLSLPWRGKK
        R IVEFRTPQHPS GKNNWGGASPLLARNIPHETLELRYL LN++RTRDEIFPLQ D+ D +YYLP+SYT +LQ+  +K+K ++R+SFLSKLSLPW+GK+
Subjt:  RQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQR-LEKSKNMKRSSFLSKLSLPWRGKK

Query:  -TLLGSNSRKKWFTRWDYQNRWPQGWC
         TLLGSNSRKKWF +WDYQNRWPQGWC
Subjt:  -TLLGSNSRKKWFTRWDYQNRWPQGWC

MBA0822438.1 hypothetical protein [Gossypium armourianum]4.2e-3054.76Show/hide
Query:  RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK
        +R+++EFRTPQHPS+G NNWGGASPLLAR+IP E+LE RYL LNS R RDEIFP   D  + +   P       Q    S+  +   FLSKL  PW+   
Subjt:  RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK

Query:  TLLGSNSRKKWFTRWDYQNRWPQGWC
        TL  ++SR++WF RWD +NRWPQGWC
Subjt:  TLLGSNSRKKWFTRWDYQNRWPQGWC

TYI75034.1 hypothetical protein E1A91_D07G246700v1 [Gossypium mustelinum]2.5e-3054.76Show/hide
Query:  RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK
        +R+++EFRTPQHPS+G NNWGGASPLLAR+IP E+LE RYL LNS R RDEIFP + D  + +   P       Q    S+  +   FLSKL  PW+   
Subjt:  RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK

Query:  TLLGSNSRKKWFTRWDYQNRWPQGWC
        TL  ++SR++WF RWD +NRWPQGWC
Subjt:  TLLGSNSRKKWFTRWDYQNRWPQGWC

TYK20514.1 hypothetical protein E5676_scaffold237G00890 [Cucumis melo var. makuwa]8.4e-5582.54Show/hide
Query:  EFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDD----SSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK-
        EFRTPQHPS+GKNNWGGASPLLARNIPHET+ELRYL LN+SRTRDEIFPLQ D+DD     +YYLPVSYTPRLQRLEK+K +K++SFLSKLSLPW+GK+ 
Subjt:  EFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDD----SSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK-

Query:  TLLGSNSRKKWFTRWDYQNRWPQGWC
        TLLGSNSRKKWF +WDYQNRWPQGWC
Subjt:  TLLGSNSRKKWFTRWDYQNRWPQGWC

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ1 Uncharacterized protein1.1e-5278.74Show/hide
Query:  RQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQR-LEKSKNMKRSSFLSKLSLPWRGKK
        R IVEFRTPQHPS GKNNWGGASPLLARNIPHETLELRYL LN++RTRDEIFPLQ D+ D +YYLP+SYT +LQ+  +K+K ++R+SFLSKLSLPW+GK+
Subjt:  RQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQR-LEKSKNMKRSSFLSKLSLPWRGKK

Query:  -TLLGSNSRKKWFTRWDYQNRWPQGWC
         TLLGSNSRKKWF +WDYQNRWPQGWC
Subjt:  -TLLGSNSRKKWFTRWDYQNRWPQGWC

A0A0D2PWJ9 Uncharacterized protein7.7e-3053.97Show/hide
Query:  RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK
        +R+++EFRTPQHPS+G NNWGG SPLLAR+IP E+LE RYL LNS R RDEIFP   D  + +   P       Q    S+  +   FLSKL  PW+   
Subjt:  RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK

Query:  TLLGSNSRKKWFTRWDYQNRWPQGWC
        TL  ++SR++WF RWD +NRWPQGWC
Subjt:  TLLGSNSRKKWFTRWDYQNRWPQGWC

A0A5D2UEN6 Uncharacterized protein1.2e-3054.76Show/hide
Query:  RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK
        +R+++EFRTPQHPS+G NNWGGASPLLAR+IP E+LE RYL LNS R RDEIFP + D  + +   P       Q    S+  +   FLSKL  PW+   
Subjt:  RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK

Query:  TLLGSNSRKKWFTRWDYQNRWPQGWC
        TL  ++SR++WF RWD +NRWPQGWC
Subjt:  TLLGSNSRKKWFTRWDYQNRWPQGWC

A0A5D3DAH9 Uncharacterized protein4.1e-5582.54Show/hide
Query:  EFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDD----SSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK-
        EFRTPQHPS+GKNNWGGASPLLARNIPHET+ELRYL LN+SRTRDEIFPLQ D+DD     +YYLPVSYTPRLQRLEK+K +K++SFLSKLSLPW+GK+ 
Subjt:  EFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDD----SSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK-

Query:  TLLGSNSRKKWFTRWDYQNRWPQGWC
        TLLGSNSRKKWF +WDYQNRWPQGWC
Subjt:  TLLGSNSRKKWFTRWDYQNRWPQGWC

A0A7J9IKX3 Uncharacterized protein2.0e-3054.76Show/hide
Query:  RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK
        +R+++EFRTPQHPS+G NNWGGASPLLAR+IP E+LE RYL LNS R RDEIFP   D  + +   P       Q    S+  +   FLSKL  PW+   
Subjt:  RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKK

Query:  TLLGSNSRKKWFTRWDYQNRWPQGWC
        TL  ++SR++WF RWD +NRWPQGWC
Subjt:  TLLGSNSRKKWFTRWDYQNRWPQGWC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGAGGCAAATAGTAGAATTTAGAACACCCCAGCACCCTTCTGTGGGCAAAAACAACTGGGGTGGAGCTTCTCCTTTGCTAGCCAGAAACATACCCCATGAGACTCTAGA
ACTGAGGTACCTCAACCTCAATTCCTCTCGTACTCGAGACGAAATCTTTCCTCTGCAAGGCGATGACGACGATTCCAGCTACTACTTGCCCGTCTCGTACACACCTCGAC
TGCAGCGTCTTGAAAAGTCGAAGAATATGAAAAGGAGTTCATTTTTGTCAAAGTTATCCTTGCCCTGGAGAGGGAAGAAAACATTGTTGGGCTCCAACTCAAGGAAGAAA
TGGTTCACGAGATGGGATTATCAGAACAGGTGGCCTCAGGGCTGGTGC
mRNA sequenceShow/hide mRNA sequence
AGGAGGCAAATAGTAGAATTTAGAACACCCCAGCACCCTTCTGTGGGCAAAAACAACTGGGGTGGAGCTTCTCCTTTGCTAGCCAGAAACATACCCCATGAGACTCTAGA
ACTGAGGTACCTCAACCTCAATTCCTCTCGTACTCGAGACGAAATCTTTCCTCTGCAAGGCGATGACGACGATTCCAGCTACTACTTGCCCGTCTCGTACACACCTCGAC
TGCAGCGTCTTGAAAAGTCGAAGAATATGAAAAGGAGTTCATTTTTGTCAAAGTTATCCTTGCCCTGGAGAGGGAAGAAAACATTGTTGGGCTCCAACTCAAGGAAGAAA
TGGTTCACGAGATGGGATTATCAGAACAGGTGGCCTCAGGGCTGGTGC
Protein sequenceShow/hide protein sequence
RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSKNMKRSSFLSKLSLPWRGKKTLLGSNSRKK
WFTRWDYQNRWPQGWC