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MS020279 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020279
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHNH domain-containing protein
Genome locationscaffold665:691056..691170
RNA-Seq ExpressionMS020279
SyntenyMS020279
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7838499.1 HNH endonuclease domain-containing protein [Senna tora]6.6e-1172.73Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFDTKAK +CWAKADIVP      WRKDA GN+VCKRFC+C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
RAL53706.1 hypothetical protein DM860_015434 [Cuscuta australis]2.5e-1070.45Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFDT AK++CWAKADIVP      WRKDA GN+VCKRFC+C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
XP_022135260.1 uncharacterized protein LOC111007267 [Momordica charantia]5.0e-1177.27Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFDTKAK ICWAKADIVP      WRKDA GNVVCKRFC+C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
XP_022933741.1 uncharacterized protein LOC111441065 [Cucurbita moschata]1.9e-1075Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFDTKAK ICWAKAD VP      WRKDA GNVVCKRFC+C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
XP_023531696.1 uncharacterized protein LOC111793864 [Cucurbita pepo subsp. pepo]1.9e-1075Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFDTKAK ICWAKAD VP      WRKDA GNVVCKRFC+C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
TrEMBL top hitse value%identityAlignment
A0A328E8M2 HNHc domain-containing protein1.2e-1070.45Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFDT AK++CWAKADIVP      WRKDA GN+VCKRFC+C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
A0A484LM52 HNHc domain-containing protein1.2e-1070.45Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFDT AK++CWAKADIVP      WRKDA GN+VCKRFC+C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
A0A6J1C0N7 uncharacterized protein LOC1110072672.4e-1177.27Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFDTKAK ICWAKADIVP      WRKDA GNVVCKRFC+C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
A0A6J1EZW3 uncharacterized protein LOC1114410659.2e-1175Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFDTKAK ICWAKAD VP      WRKDA GNVVCKRFC+C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
A0A6J1I7G1 uncharacterized protein LOC1114715099.2e-1175Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFDTKAK ICWAKAD VP      WRKDA GNVVCKRFC+C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18680.1 HNH endonuclease domain-containing protein3.1e-1163.64Show/hide
Query:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC
        RP FFD KAK+ CWA ADIVP      WRKD  GN+VCKRF +C
Subjt:  RPTFFDTKAKDICWAKADIVP------WRKDAVGNVVCKRFCSC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTCCGACATTTTTCGATACCAAAGCGAAAGACATTTGTTGGGCAAAGGCCGACATTGTCCCGTGGCGTAAGGACGCCGTCGGTAACGTTGTCTGCAAGCGCTTCTGCAG
CTGC
mRNA sequenceShow/hide mRNA sequence
CGTCCGACATTTTTCGATACCAAAGCGAAAGACATTTGTTGGGCAAAGGCCGACATTGTCCCGTGGCGTAAGGACGCCGTCGGTAACGTTGTCTGCAAGCGCTTCTGCAG
CTGC
Protein sequenceShow/hide protein sequence
RPTFFDTKAKDICWAKADIVPWRKDAVGNVVCKRFCSC