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MS020284 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020284
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionbet1-like SNARE 1-1
Genome locationscaffold665:732530..733356
RNA-Seq ExpressionMS020284
SyntenyMS020284
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain
IPR039897 - BET1-like protein
IPR039899 - BET1, SNARE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151976.1 bet1-like SNARE 1-1 [Cucumis sativus]1.1e-5496.64Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE+RNNRVALFDGIEEGGVRAS S+SSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
        FSLVALFVTIFFIVYYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

XP_008454511.1 PREDICTED: bet1-like SNARE 1-1 [Cucumis melo]2.4e-5495.8Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE+RNNRVALFDGIEEGGVRAS S++SHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
        FSLVALFVTIFFIVYYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

XP_022146012.1 bet1-like SNARE 1-1 [Momordica charantia]5.7e-5699.16Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
        FSLVALFV IFFIVYYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

XP_022963635.1 bet1-like SNARE 1-1 [Cucurbita moschata]7.0e-5495.8Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
        FSLVALFV IFFIVYYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

XP_038887294.1 bet1-like SNARE 1-1 [Benincasa hispida]6.3e-5596.64Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNEAAL+GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
        FSLVALFV IFFIVYYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

TrEMBL top hitse value%identityAlignment
A0A0A0LBA5 t-SNARE coiled-coil homology domain-containing protein5.2e-5596.64Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE+RNNRVALFDGIEEGGVRAS S+SSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
        FSLVALFVTIFFIVYYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

A0A1S3BYS3 bet1-like SNARE 1-11.2e-5495.8Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE+RNNRVALFDGIEEGGVRAS S++SHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
        FSLVALFVTIFFIVYYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

A0A5A7VLV2 Bet1-like SNARE 1-11.2e-5495.8Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE+RNNRVALFDGIEEGGVRAS S++SHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
        FSLVALFVTIFFIVYYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

A0A6J1CYB1 bet1-like SNARE 1-12.8e-5699.16Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
        FSLVALFV IFFIVYYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

A0A6J1HRZ5 bet1-like SNARE 1-13.4e-5495.8Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
        FSLVALFV IFFIVYYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

SwissProt top hitse value%identityAlignment
O35152 BET1-like protein4.3e-0634Show/hide
Query:  RASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPK--MFSLVALFVTIFFIVYYL
        RA SS +  EI + +N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF TV       +  +  +  + +  FFI+ YL
Subjt:  RASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPK--MFSLVALFVTIFFIVYYL

Q3MHP8 BET1-like protein2.8e-0535Show/hide
Query:  RASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMFSLVAL-FVTIFFIVYYL
        RA S  +  EI + +N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF T+    + + K+   VA+  +  FFI+ YL
Subjt:  RASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMFSLVAL-FVTIFFIVYYL

Q5RBX2 BET1-like protein7.3e-0633.98Show/hide
Query:  RASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMF--SLVALFVTIFFIVYY
        RA S  +  EI + +N+   + L  +V  LK L  DI+++ E  NR LD M +D  S  G+L+G++ RF T+    + + K+     V L V  F + Y+
Subjt:  RASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMF--SLVALFVTIFFIVYY

Query:  LTR
        L+R
Subjt:  LTR

Q94CG2 Bet1-like SNARE 1-22.5e-3058.2Show/hide
Query:  REMRNNRVALF---DGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSS
        RE R +R +LF   DG+EEG +RASSS++    +E DN+ ALE LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+ KS+
Subjt:  REMRNNRVALF---DGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSS

Query:  PKMFSLVALFVTIFFIVYYLTR
         K   L+A FV +F I+YYL R
Subjt:  PKMFSLVALFVTIFFIVYYLTR

Q9M2J9 Bet1-like SNARE 1-12.0e-4375.63Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE R  R +LFDGIEEGG+RA+SS+ SHEI EH+NE ALEGLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KSS +M
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
         +LVA FV +F ++YYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

Arabidopsis top hitse value%identityAlignment
AT3G58170.1 BET1P/SFT1P-like protein 14A1.4e-4475.63Show/hide
Query:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE R  R +LFDGIEEGG+RA+SS+ SHEI EH+NE ALEGLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KSS +M
Subjt:  REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  FSLVALFVTIFFIVYYLTR
         +LVA FV +F ++YYLTR
Subjt:  FSLVALFVTIFFIVYYLTR

AT4G14455.1 Target SNARE coiled-coil domain protein1.8e-3158.2Show/hide
Query:  REMRNNRVALF---DGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSS
        RE R +R +LF   DG+EEG +RASSS++    +E DN+ ALE LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+ KS+
Subjt:  REMRNNRVALF---DGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSS

Query:  PKMFSLVALFVTIFFIVYYLTR
         K   L+A FV +F I+YYL R
Subjt:  PKMFSLVALFVTIFFIVYYLTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTTAGAGTGCAGGGAAATGCGCAACAACAGGGTTGCTCTCTTCGATGGCATCGAGGAGGGTGGCGTTAGGGCTTCATCTTCATTCTCCTCCCATGAAATTGAGGAGCA
TGATAATGAAGCAGCATTGGAAGGTTTGCAAGACAGAGTCCTCCTATTGAAAAGGTTGACAGGGGACATAAATGAGGAGGTGGAGAGTCATAACCGGATGCTGGATAGGA
TGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCGGGCACTATGGATCGATTCAAGACGGTATTCGATCCCAAGTCAAGCCCGAAGATGTTCTCACTAGTCGCACTT
TTCGTGACAATTTTCTTCATCGTGTACTATCTCACAAGA
mRNA sequenceShow/hide mRNA sequence
CTCTTAGAGTGCAGGGAAATGCGCAACAACAGGGTTGCTCTCTTCGATGGCATCGAGGAGGGTGGCGTTAGGGCTTCATCTTCATTCTCCTCCCATGAAATTGAGGAGCA
TGATAATGAAGCAGCATTGGAAGGTTTGCAAGACAGAGTCCTCCTATTGAAAAGGTTGACAGGGGACATAAATGAGGAGGTGGAGAGTCATAACCGGATGCTGGATAGGA
TGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCGGGCACTATGGATCGATTCAAGACGGTATTCGATCCCAAGTCAAGCCCGAAGATGTTCTCACTAGTCGCACTT
TTCGTGACAATTTTCTTCATCGTGTACTATCTCACAAGA
Protein sequenceShow/hide protein sequence
LLECREMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVAL
FVTIFFIVYYLTR