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MS020290 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020290
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranscription factor bHLH3
Genome locationscaffold665:772868..773014
RNA-Seq ExpressionMS020290
SyntenyMS020290
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6737345.1 hypothetical protein POTOM_058861 [Populus tomentosa]4.1e-0564.44Show/hide
Query:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
        QSLQRGPVPPSG +PCT IPG GS   C LG MN AG  +   PP
Subjt:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
KAG6737346.1 hypothetical protein POTOM_058862 [Populus tomentosa]1.2e-0462.22Show/hide
Query:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
        QSLQRGPVPPSG +PCT  PG+GS   C LG MN AG  +   PP
Subjt:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
KAG6738308.1 hypothetical protein POTOM_057919 [Populus tomentosa]9.0e-0560Show/hide
Query:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
        QSL+RGPVPPSG +PCT  PG+GS   C LG MN AG  + + PP
Subjt:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
TKR86242.1 hypothetical protein D5086_0000239900 [Populus alba]9.0e-0560Show/hide
Query:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
        QSL+RGPVPPSG +PCT  PG+GS   C LG MN AG  + + PP
Subjt:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
TKR89923.1 hypothetical protein D5086_0000238580 [Populus alba]9.0e-0560Show/hide
Query:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
        QSL+RGPVPPSG +PCT  PG+GS   C LG MN AG  + + PP
Subjt:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
TrEMBL top hitse value%identityAlignment
A0A4U5NSK4 Uncharacterized protein4.4e-0560Show/hide
Query:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
        QSL+RGPVPPSG +PCT  PG+GS   C LG MN AG  + + PP
Subjt:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
A0A4U5NT69 Uncharacterized protein1.7e-0460Show/hide
Query:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
        QSL+RGPVPPSG + CT IPG+GS   C LG MN AG  +   PP
Subjt:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
A0A4U5P345 Uncharacterized protein4.4e-0560Show/hide
Query:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
        QSL+RGPVPPSG +PCT  PG+GS   C LG MN AG  + + PP
Subjt:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
A0A4U5P363 Uncharacterized protein1.7e-0460Show/hide
Query:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
        QSL+RGPVPPSG + CT IPG+GS   C LG MN AG  +   PP
Subjt:  QSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
A0A4U5R2J9 Uncharacterized protein1.7e-0462.79Show/hide
Query:  LQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
        LQ+G V PSGPNPCT IPG   T  C L GMN+AG+V+ R PP
Subjt:  LQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTCACAGTCGCTGCAGCGTGGGCCGGTGCCGCCGTCTGGGCCCAACCCATGTACCACCATTCCCGGGCAAGGGAGTACTACTCCCTGCGCATTGGGCGGCATGAATGT
CGCCGGCGCCGTTCTCCGGCGACTACCGCCTCTTCCA
mRNA sequenceShow/hide mRNA sequence
GTTTCACAGTCGCTGCAGCGTGGGCCGGTGCCGCCGTCTGGGCCCAACCCATGTACCACCATTCCCGGGCAAGGGAGTACTACTCCCTGCGCATTGGGCGGCATGAATGT
CGCCGGCGCCGTTCTCCGGCGACTACCGCCTCTTCCA
Protein sequenceShow/hide protein sequence
VSQSLQRGPVPPSGPNPCTTIPGQGSTTPCALGGMNVAGAVLRRLPPLP