; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020303 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020303
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhistone H1
Genome locationscaffold665:863375..864300
RNA-Seq ExpressionMS020303
SyntenyMS020303
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057394.1 histone H1 [Cucumis melo var. makuwa]6.4e-10892.65Show/hide
Query:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
        MATEEPVVPVESAAEPT+AE AEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKP SPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAAPKPK AP KSKSSAVAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        A KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  KKAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

XP_004140078.1 histone H1 [Cucumis sativus]2.8e-10389.34Show/hide
Query:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
        MATEEPVVPVESAAEPT+AE AEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK LP NFKKLL
Subjt:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKLV SGKLVKVKSSFKLKPAKSAVVKP SPAKKKP AAKPK K  AK KAVAKSPAKPKAAAKPKPK   KPKAAPKPK APAKSKSSAVAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        A KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  KKAPAAKKAP+KSVKAKKVKS AKK+PAKRG K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

XP_008449373.1 PREDICTED: histone H1 [Cucumis melo]6.4e-10892.65Show/hide
Query:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
        MATEEPVVPVESAAEPT+AE AEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKP SPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAAPKPK AP KSKSSAVAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        A KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  KKAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

XP_022145924.1 histone H1 [Momordica charantia]5.5e-12099.63Show/hide
Query:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
        MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMI DAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

XP_038888055.1 histone H1-like [Benincasa hispida]4.7e-10389.71Show/hide
Query:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
        MATEEPVVPVESAAEP + E AEENP NKAAKSKKSKEPKEKKPAA +K RNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEK+K LP NFKK+L
Subjt:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKLVASGKLVKVK+SFKLKPAKSA+VKP +PAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPA AKSKSSAVAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        A KTKAAPKPKAKEKPAKVARTSTRTSPGR+APAPKPA KKA A KKAPAKSVKAKKVKSPAKKA AKRG+K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

TrEMBL top hitse value%identityAlignment
A0A0A0KDR2 H15 domain-containing protein1.3e-10389.34Show/hide
Query:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
        MATEEPVVPVESAAEPT+AE AEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK LP NFKKLL
Subjt:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKLV SGKLVKVKSSFKLKPAKSAVVKP SPAKKKP AAKPK K  AK KAVAKSPAKPKAAAKPKPK   KPKAAPKPK APAKSKSSAVAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        A KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  KKAPAAKKAP+KSVKAKKVKS AKK+PAKRG K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

A0A1S3BL93 histone H13.1e-10892.65Show/hide
Query:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
        MATEEPVVPVESAAEPT+AE AEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKP SPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAAPKPK AP KSKSSAVAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        A KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  KKAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

A0A5A7UQL0 Histone H13.1e-10892.65Show/hide
Query:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
        MATEEPVVPVESAAEPT+AE AEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKP SPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAAPKPK AP KSKSSAVAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        A KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  KKAPAAKKAP+KSVKAKKVKS AKKAP+KRG K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

A0A6J1CWP2 histone H12.7e-12099.63Show/hide
Query:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
        MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMI DAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

A0A6J1ES19 histone H11.5e-10289.71Show/hide
Query:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL
        MATEEPVVPVESAAEPT+AE AEENP NKAAKSKKSK+PKEKKPAA RK RNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKLVASGKLVKVKSSFKLK AKSA+VKP SPA K+PAAAKPKPKAAAKTKAVAKS AKPKAAAKPKPKTAAKPKAA KPKP  AKSKSS VAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        A+KTKAAPKPKAKEKPAK +RTSTRTSPG++APAPKPA KKAPA+KKAPAKSV AKKVKSPA+KAPA+R KK
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

SwissProt top hitse value%identityAlignment
P08283 Histone H13.8e-4757.86Show/hide
Query:  MATEEPVVPVESAAEP--------TSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHL
        MATEEP+V VE+  EP        T  E  E+  P   A+ +K+K+ K  KP    KPRNP +HP YEEMIKDAIV+LKE+ GSSQYAI KFIEEKQK L
Subjt:  MATEEPVVPVESAAEP--------TSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHL

Query:  PSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAV-AKSPAKPKAAAKPKPKTAAKPKA-APKPKPAPAKS
        P+NFKKLLL +LKK VASGKL+KVK SFKL           S A KKPA AKPK K AAK K+V AK  AKPKA A  KPK A+K KA A KPK A AK 
Subjt:  PSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAV-AKSPAKPKAAAKPKPKTAAKPKA-APKPKPAPAKS

Query:  KSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRG
        K+ A      A K KA  KPK+K KPAKVA+TS +T+PG++  A K       AAKK P KSVKAK VKSP KK   KRG
Subjt:  KSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRG

P26568 Histone H1.12.9e-3152.65Show/hide
Query:  SAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKP-AAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVAS
        +A  P +  A E+ P  K  K+K  KE KEKK  AA  K R   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK+K LP  F+KLLL +LK+LVAS
Subjt:  SAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKP-AAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVAS

Query:  GKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKA----VAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA
        GKLVKVK+SFKL P+ SA    P  A +K A AK KP   A TKA     A S AK   A KPK   A K  A  K KP P  +         AATK KA
Subjt:  GKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKA----VAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA

Query:  A-PKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKS-VKAKKVKSPAKKAPAK
           KPKAK +PAK A+T+  TSP ++A A           KK P K  VK K VKSPAK+A ++
Subjt:  A-PKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKS-VKAKKVKSPAKKAPAK

P26569 Histone H1.21.2e-4056.64Show/hide
Query:  MATEEPVVP--VESAAEPTSAEAAEENPPNKAAKSKKSKEPK-EKKP---AAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPS
        M+ EE  VP  V+S A  T+ ++ E+ P  K  KSKK+   K  KKP   AAP K +   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP 
Subjt:  MATEEPVVP--VESAAEPTSAEAAEENPPNKAAKSKKSKEPK-EKKP---AAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPS

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVV-KPPSPAKKK-PAAAKPKPKAA-----AKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAP
         F+KLLL +LK+LVAS KLVKVK+SFK+  A+SA   KP +P KKK    AKPK K A     AK KA AK   KP A    K K  AKPKA    K   
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVV-KPPSPAKKK-PAAAKPKPKAA-----AKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAP

Query:  AKSKSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        AK KS +VA   A +KTKA A KPKAKE+PAK +RTSTRTSPG++  AP    KK    KKAPAKSV   KVKSPAK+A  ++ KK
Subjt:  AKSKSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

P27806 Histone H19.4e-3051.47Show/hide
Query:  ATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK-HLPSNFKKLL
        A + PV  VE A     A+AA + P  K AK+ K+ + K+  P  P+KPR  P HP Y EM+ +AI  LKER+GSS  AI KFIE+K K HLP+NF+K+L
Subjt:  ATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK-HLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        L  +KKLVA+GKL KVK S+KL  A +A VKP +  KKKP AAKPK KA AK K  AKSPAK KAAAKPK K             APAK+K  AVAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        A K KAA KPKAK    K               AP  A  K PAA+K P K     K  +PAKK  AK+ KK
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

P37218 Histone H12.4e-4961Show/hide
Query:  MATEEPVVPVESAAEPTSAEAA--EENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKK
        MATEEPV+  E   E  + E    E NPP K+ K+K  KE K KKPAAPRK    PTHPPY EMIKDAIVTLKERTGSSQ+AITKFIEEKQK LPSNFKK
Subjt:  MATEEPVVPVESAAEPTSAEAA--EENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKK

Query:  LLLFHLKKLVASGKLVKVKSSFKL----KPAKSAVVKPPSPAKKKPAAAK----PKPKAAAKTKAVAKSPAKPKAAAKP--------KPKTAAKPKAAPK
        LLL  LKK VAS KLVKVK+S+KL    KPA +AV     PAKKKPAAAK     KPKAA K KA   + AKP A AKP        K K AAK K A K
Subjt:  LLLFHLKKLVASGKLVKVKSSFKL----KPAKSAVVKPPSPAKKKPAAAK----PKPKAAAKTKAVAKSPAKPKAAAKP--------KPKTAAKPKAAPK

Query:  PKP-APAKSKSSAVAKPKAATKTKAAP-------KP--KAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
         KP A AK K++A AKPKAA K KAAP       KP  KAK   AKVA+T+TRT+P R+A     APK  P AKK P K   AK VKSPAKKA  KRG+K
Subjt:  PKP-APAKSKSSAVAKPKAATKTKAAP-------KP--KAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein2.1e-3252.65Show/hide
Query:  SAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKP-AAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVAS
        +A  P +  A E+ P  K  K+K  KE KEKK  AA  K R   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK+K LP  F+KLLL +LK+LVAS
Subjt:  SAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKP-AAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVAS

Query:  GKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKA----VAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA
        GKLVKVK+SFKL P+ SA    P  A +K A AK KP   A TKA     A S AK   A KPK   A K  A  K KP P  +         AATK KA
Subjt:  GKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKA----VAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA

Query:  A-PKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKS-VKAKKVKSPAKKAPAK
           KPKAK +PAK A+T+  TSP ++A A           KK P K  VK K VKSPAK+A ++
Subjt:  A-PKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKS-VKAKKVKSPAKKAPAK

AT2G18050.1 histone H1-31.9e-0939.29Show/hide
Query:  KKPAAPRKPRNP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKH-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKK
        KK  A +KPR P   THPPY +MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  VA GKLVK+++S+KL      + +      K
Subjt:  KKPAAPRKPRNP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKH-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKK

Query:  KPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA
        K    + K +   +T++ +  P K  +  K + K   K    P       KS  S+V K KA   + A
Subjt:  KPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA

AT2G18050.2 histone H1-38.3e-0536.99Show/hide
Query:  MIKDAIVTLKERTGSSQYAITKFIEEKQKH-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSP
        MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  VA GKLVK+++S+KL      + +      KK    + K +   +T++ +  P
Subjt:  MIKDAIVTLKERTGSSQYAITKFIEEKQKH-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSP

Query:  AKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA
         K  +  K + K   K    P       KS  S+V K KA   + A
Subjt:  AKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein8.4e-4256.64Show/hide
Query:  MATEEPVVP--VESAAEPTSAEAAEENPPNKAAKSKKSKEPK-EKKP---AAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPS
        M+ EE  VP  V+S A  T+ ++ E+ P  K  KSKK+   K  KKP   AAP K +   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP 
Subjt:  MATEEPVVP--VESAAEPTSAEAAEENPPNKAAKSKKSKEPK-EKKP---AAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPS

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVV-KPPSPAKKK-PAAAKPKPKAA-----AKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAP
         F+KLLL +LK+LVAS KLVKVK+SFK+  A+SA   KP +P KKK    AKPK K A     AK KA AK   KP A    K K  AKPKA    K   
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVV-KPPSPAKKK-PAAAKPKPKAA-----AKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAP

Query:  AKSKSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        AK KS +VA   A +KTKA A KPKAKE+PAK +RTSTRTSPG++  AP    KK    KKAPAKSV   KVKSPAK+A  ++ KK
Subjt:  AKSKSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK

AT2G30620.2 winged-helix DNA-binding transcription factor family protein8.2e-2945.32Show/hide
Query:  MATEEPVVP--VESAAEPTSAEAAEENPPNKAAKSKKSKEPK-EKKP---AAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPS
        M+ EE  VP  V+S A  T+ ++ E+ P  K  KSKK+   K  KKP   AAP K +   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP 
Subjt:  MATEEPVVP--VESAAEPTSAEAAEENPPNKAAKSKKSKEPK-EKKP---AAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPS

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSA
         F+KLLL +LK+LVAS KLVKVK+SFK+  A+SA                                                  A PKP  AP K K++ 
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSA

Query:  VAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK
        VAKPKA                   +RTSTRTSPG++  AP    KK    KKAPAKSV   KVKSPAK+A  ++ KK
Subjt:  VAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGAGGAACCGGTCGTACCGGTGGAGTCTGCTGCGGAGCCGACCAGCGCCGAAGCAGCAGAAGAGAACCCGCCGAACAAGGCTGCCAAGTCGAAGAAGTCTAA
AGAGCCTAAAGAGAAGAAGCCTGCTGCTCCTCGAAAACCTAGAAATCCTCCAACTCATCCTCCCTATGAAGAGATGATTAAGGATGCGATTGTCACGTTGAAGGAGAGGA
CAGGTTCGAGTCAGTATGCGATCACGAAATTCATTGAGGAGAAGCAGAAGCACCTTCCTTCAAATTTTAAAAAGCTCTTGTTATTCCACTTGAAGAAACTTGTAGCTTCC
GGGAAGTTAGTGAAGGTTAAGAGCTCGTTCAAGCTTAAGCCGGCGAAGTCAGCAGTTGTAAAACCCCCTTCACCTGCGAAGAAGAAGCCAGCAGCTGCCAAGCCGAAACC
CAAAGCGGCCGCTAAGACTAAGGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCAGCGAAGCCAAAGCCTAAGACGGCTGCCAAGCCCAAGGCTGCTCCTAAACCAA
AACCTGCTCCAGCCAAATCAAAGAGCAGTGCTGTTGCGAAGCCCAAAGCTGCAACGAAGACTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGTGGCA
AGAACGTCGACGAGAACCTCACCGGGGAGGCGGGCACCGGCTCCGAAACCGGCGCCGAAGAAAGCACCGGCGGCTAAAAAGGCCCCGGCGAAAAGTGTTAAAGCTAAGAA
AGTGAAATCGCCAGCGAAGAAGGCTCCGGCCAAAAGAGGGAAGAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTGAGGAACCGGTCGTACCGGTGGAGTCTGCTGCGGAGCCGACCAGCGCCGAAGCAGCAGAAGAGAACCCGCCGAACAAGGCTGCCAAGTCGAAGAAGTCTAA
AGAGCCTAAAGAGAAGAAGCCTGCTGCTCCTCGAAAACCTAGAAATCCTCCAACTCATCCTCCCTATGAAGAGATGATTAAGGATGCGATTGTCACGTTGAAGGAGAGGA
CAGGTTCGAGTCAGTATGCGATCACGAAATTCATTGAGGAGAAGCAGAAGCACCTTCCTTCAAATTTTAAAAAGCTCTTGTTATTCCACTTGAAGAAACTTGTAGCTTCC
GGGAAGTTAGTGAAGGTTAAGAGCTCGTTCAAGCTTAAGCCGGCGAAGTCAGCAGTTGTAAAACCCCCTTCACCTGCGAAGAAGAAGCCAGCAGCTGCCAAGCCGAAACC
CAAAGCGGCCGCTAAGACTAAGGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCAGCGAAGCCAAAGCCTAAGACGGCTGCCAAGCCCAAGGCTGCTCCTAAACCAA
AACCTGCTCCAGCCAAATCAAAGAGCAGTGCTGTTGCGAAGCCCAAAGCTGCAACGAAGACTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGTGGCA
AGAACGTCGACGAGAACCTCACCGGGGAGGCGGGCACCGGCTCCGAAACCGGCGCCGAAGAAAGCACCGGCGGCTAAAAAGGCCCCGGCGAAAAGTGTTAAAGCTAAGAA
AGTGAAATCGCCAGCGAAGAAGGCTCCGGCCAAAAGAGGGAAGAAG
Protein sequenceShow/hide protein sequence
MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVAS
GKLVKVKSSFKLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVA
RTSTRTSPGRRAPAPKPAPKKAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK