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MS020315 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020315
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold665:946478..946823
RNA-Seq ExpressionMS020315
SyntenyMS020315
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61696.1 hypothetical protein Csa_006426 [Cucumis sativus]4.5e-2360Show/hide
Query:  HVDMNPSQ-HLRLFFLKT-EDFSFLFHRPLKESRERTLKPSSFLPSVSLIFLAGGYCTTPENTLLAGNYGVSYLRLRCRYGLGTLTVSDFPKQKRLYLAE
        +VD+NPSQ HL   FL   +DFSFLFHR LK+SR RT  P   L   +  F +G    +PE   L+ +YGVSY RLR RYGL TLTVS F K+KRLYLAE
Subjt:  HVDMNPSQ-HLRLFFLKT-EDFSFLFHRPLKESRERTLKPSSFLPSVSLIFLAGGYCTTPENTLLAGNYGVSYLRLRCRYGLGTLTVSDFPKQKRLYLAE

Query:  FRSYSIFCLK
        FRSYSIFCL+
Subjt:  FRSYSIFCLK
TrEMBL top hitse value%identityAlignment
A0A0A0LNW3 Uncharacterized protein2.2e-2360Show/hide
Query:  HVDMNPSQ-HLRLFFLKT-EDFSFLFHRPLKESRERTLKPSSFLPSVSLIFLAGGYCTTPENTLLAGNYGVSYLRLRCRYGLGTLTVSDFPKQKRLYLAE
        +VD+NPSQ HL   FL   +DFSFLFHR LK+SR RT  P   L   +  F +G    +PE   L+ +YGVSY RLR RYGL TLTVS F K+KRLYLAE
Subjt:  HVDMNPSQ-HLRLFFLKT-EDFSFLFHRPLKESRERTLKPSSFLPSVSLIFLAGGYCTTPENTLLAGNYGVSYLRLRCRYGLGTLTVSDFPKQKRLYLAE

Query:  FRSYSIFCLK
        FRSYSIFCL+
Subjt:  FRSYSIFCLK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACGCCGGATTCCACGTGGACATGAATCCTAGTCAGCACCTCCGACTTTTCTTTTTAAAGACCGAAGACTTCTCATTTCTCTTCCATCGTCCACTGAAAGAAAGCCGAGA
GCGTACTCTTAAACCGAGTTCATTTCTACCTTCCGTCTCCCTGATTTTCTTGGCCGGCGGCTACTGTACCACGCCGGAAAATACGCTCCTCGCCGGAAATTATGGAGTTT
CTTATCTTCGGTTGCGTTGCAGATACGGTCTGGGCACTCTGACCGTATCTGATTTCCCCAAGCAAAAGCGACTTTACTTGGCTGAGTTTCGAAGTTATTCCATATTCTGT
TTAAAAATA
mRNA sequenceShow/hide mRNA sequence
CACGCCGGATTCCACGTGGACATGAATCCTAGTCAGCACCTCCGACTTTTCTTTTTAAAGACCGAAGACTTCTCATTTCTCTTCCATCGTCCACTGAAAGAAAGCCGAGA
GCGTACTCTTAAACCGAGTTCATTTCTACCTTCCGTCTCCCTGATTTTCTTGGCCGGCGGCTACTGTACCACGCCGGAAAATACGCTCCTCGCCGGAAATTATGGAGTTT
CTTATCTTCGGTTGCGTTGCAGATACGGTCTGGGCACTCTGACCGTATCTGATTTCCCCAAGCAAAAGCGACTTTACTTGGCTGAGTTTCGAAGTTATTCCATATTCTGT
TTAAAAATA
Protein sequenceShow/hide protein sequence
HAGFHVDMNPSQHLRLFFLKTEDFSFLFHRPLKESRERTLKPSSFLPSVSLIFLAGGYCTTPENTLLAGNYGVSYLRLRCRYGLGTLTVSDFPKQKRLYLAEFRSYSIFC
LKI