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MS020334 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020334
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionmajor pollen allergen Ole e 6-like
Genome locationscaffold665:1117107..1117340
RNA-Seq ExpressionMS020334
SyntenyMS020334
Gene Ontology termsNA
InterPro domainsIPR015333 - Pollen allergen ole e 6
IPR036466 - Pollen allergen ole e 6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146471.1 major pollen allergen Ole e 6 [Cucumis sativus]1.6e-1656.1Show/hide
Query:  MANKLVAVFLVCVVVMAAMQTPTAAAEN------KYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL
        MANK++A+FL+C+VV+AA+Q   A  E+      K+DA+Y+ CF  CE +C + G G S+CEVKCDEDC +KEAADKLHI L
Subjt:  MANKLVAVFLVCVVVMAAMQTPTAAAEN------KYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL

XP_008456958.1 PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo]2.8e-1654.22Show/hide
Query:  MANKLVAVFLVCVVVMAAMQTPTAAAEN-------KYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL
        MA K++A+FL+C+VV+AA+Q  +A  E+       K+DA+Y+ CF  CE +C +NG G S+CEVKCDEDC +KE ADKLHI L
Subjt:  MANKLVAVFLVCVVVMAAMQTPTAAAEN-------KYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL

XP_038875643.1 major pollen allergen Ole e 6-like [Benincasa hispida]2.1e-1656.79Show/hide
Query:  MANKLVAVFLVCVVVMAAMQTPTA-----AAENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL
        MA K++AVF +C+VVMAA+Q  TA       E K+DA+Y+ C+  CE +C +NG G +FCEVKCDEDC +KE ADKLHI L
Subjt:  MANKLVAVFLVCVVVMAAMQTPTA-----AAENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL

XP_038891517.1 major pollen allergen Ole e 6-like [Benincasa hispida]1.6e-1657.32Show/hide
Query:  MANKLVAVFLVCVVVMAAMQTPTA------AAENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL
        MA K++AVFL+C+VV+AA+Q  TA        E K+DA+Y+ C+  CE +C  NG G SFCEVKCDEDC +KE ADKLHI+L
Subjt:  MANKLVAVFLVCVVVMAAMQTPTA------AAENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL

XP_038906682.1 major pollen allergen Ole e 6-like [Benincasa hispida]2.1e-1657.5Show/hide
Query:  MANKLVAVFLVCVVVMAAMQTPT-----AAAENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIR
        MA K++AVFL+C+VVMAA+Q  T     A  E K+DA+Y+ C+  CE +C + G G SFCEVKCDEDC +KE ADKLHI+
Subjt:  MANKLVAVFLVCVVVMAAMQTPT-----AAAENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIR

TrEMBL top hitse value%identityAlignment
A0A0A0KPA7 Uncharacterized protein7.9e-1756.1Show/hide
Query:  MANKLVAVFLVCVVVMAAMQTPTAAAEN------KYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL
        MANK++A+FL+C+VV+AA+Q   A  E+      K+DA+Y+ CF  CE +C + G G S+CEVKCDEDC +KEAADKLHI L
Subjt:  MANKLVAVFLVCVVVMAAMQTPTAAAEN------KYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL

A0A1S3C530 major pollen allergen Ole e 6-like1.4e-1654.22Show/hide
Query:  MANKLVAVFLVCVVVMAAMQTPTAAAEN-------KYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL
        MA K++A+FL+C+VV+AA+Q  +A  E+       K+DA+Y+ CF  CE +C +NG G S+CEVKCDEDC +KE ADKLHI L
Subjt:  MANKLVAVFLVCVVVMAAMQTPTAAAEN-------KYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL

A0A5D3BCS2 Major pollen allergen Ole e 6-like1.4e-1654.22Show/hide
Query:  MANKLVAVFLVCVVVMAAMQTPTAAAEN-------KYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL
        MA K++A+FL+C+VV+AA+Q  +A  E+       K+DA+Y+ CF  CE +C +NG G S+CEVKCDEDC +KE ADKLHI L
Subjt:  MANKLVAVFLVCVVVMAAMQTPTAAAEN-------KYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL

A0A6J1EQ21 major pollen allergen Ole e 6-like1.5e-1554.22Show/hide
Query:  MANKLVAVFLVCVVVMAAMQTPTAAA-------ENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL
        MA K++AV LVC+VV+AA+Q  +A         E K++A+YR C+  CE +C + G G SFCEVKCDEDC +KEAADKLHI++
Subjt:  MANKLVAVFLVCVVVMAAMQTPTAAA-------ENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL

A0A6J1JXL5 major pollen allergen Ole e 6-like5.1e-1655.42Show/hide
Query:  MANKLVAVFLVCVVVMAAMQTPTAAA-------ENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL
        MA K++AV LVC+VVMAA+Q  +A         E K++A+YR C+  CE +C + G G SFCEVKCDEDC +KEAADKLHI++
Subjt:  MANKLVAVFLVCVVVMAAMQTPTAAA-------ENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRL

SwissProt top hitse value%identityAlignment
O24172 Major pollen allergen Ole e 66.1e-0642.86Show/hide
Query:  DARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKL
        +A+++EC+  C  +C   G G +FCE+KCD DC+ K+  +KL
Subjt:  DARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACAAATTAGTCGCAGTGTTTCTTGTGTGCGTGGTGGTGATGGCAGCGATGCAGACGCCGACGGCAGCGGCGGAGAACAAGTACGATGCCCGCTACAGGGAATG
CTTCATCGCGTGCGAGGACAAATGCAAGAAGAATGGGCAGGGCGTCAGCTTCTGCGAGGTCAAATGCGACGAAGATTGTACCCAAAAAGAGGCCGCTGATAAGCTGCACA
TCAGGCTGGATAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACAAATTAGTCGCAGTGTTTCTTGTGTGCGTGGTGGTGATGGCAGCGATGCAGACGCCGACGGCAGCGGCGGAGAACAAGTACGATGCCCGCTACAGGGAATG
CTTCATCGCGTGCGAGGACAAATGCAAGAAGAATGGGCAGGGCGTCAGCTTCTGCGAGGTCAAATGCGACGAAGATTGTACCCAAAAAGAGGCCGCTGATAAGCTGCACA
TCAGGCTGGATAAG
Protein sequenceShow/hide protein sequence
MANKLVAVFLVCVVVMAAMQTPTAAAENKYDARYRECFIACEDKCKKNGQGVSFCEVKCDEDCTQKEAADKLHIRLDK