; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020338 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020338
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNascent polypeptide-associated complex subunit alpha, muscle-specific form
Genome locationscaffold665:1139386..1139997
RNA-Seq ExpressionMS020338
SyntenyMS020338
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571464.1 hypothetical protein SDJN03_28192, partial [Cucurbita argyrosperma subsp. sororia]9.7e-9385.85Show/hide
Query:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS
        MEAV+VVEQHRNQYYGR++PHGPARF S PSRDF GMNCRSFQSGAGILPTPLKAC S  K  YPSSPKTPPTCLSS +GNGKQLA+++SAPIPI  KFS
Subjt:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS

Query:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEMH-PSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNL
        NKN A++EEFYDR+FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLELPRSAPEFEMH PSAKSAPPSPTR+   SSRF FHSADSATKTLRRILNL
Subjt:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEMH-PSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNL

Query:  DVDNE
        DVDNE
Subjt:  DVDNE

KAG6606421.1 hypothetical protein SDJN03_03738, partial [Cucurbita argyrosperma subsp. sororia]1.2e-7979.13Show/hide
Query:  MEAVVVVE-QHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKF
        MEAVVVVE QHRNQYYG       A FGS PSRDF G+NCRSFQSGAGILPTP KA TSE +  YPSSPKTP TCLSS SGN K  AT+ +APIPIK KF
Subjt:  MEAVVVVE-QHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKF

Query:  SNKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILN
         N N  ++EEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTS E+PRSAPEF++ HPSAKSAPPSPTRDQNFS RFFFH+ DSATKTLRRIL+
Subjt:  SNKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILN

Query:  LDVDNE
        LDVDNE
Subjt:  LDVDNE

KAG7011227.1 hypothetical protein SDJN02_26130, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-7984.53Show/hide
Query:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS
        MEAV+VVEQHRNQYYGR++PHGPARF S PSRDF GMNCRSFQSGAGILPTPLKAC S  K  YPSSPKTPPTCLSS +GNGKQLA+++SAPIPI  KFS
Subjt:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS

Query:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEMH-PSAKSAPPSPTRDQNFSSR
        NKN A++EEFYDR+FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLELPRSAPEFEMH PSAKSAPPSPTR+   SSR
Subjt:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEMH-PSAKSAPPSPTRDQNFSSR

KGN47907.1 hypothetical protein Csa_004001 [Cucumis sativus]2.4e-9187.32Show/hide
Query:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS
        MEAVVV+EQHRNQYY RVKPHGPARFGSL SRDF GMNCRSFQSGAGILPTPLKAC SE +  YP SPKTPP CL+S S N KQLATMRSAPIPIK K S
Subjt:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS

Query:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNL
        N++ A +EEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEL RSAPEFEM HPSAKSAPPSPTRDQNFS+RFFFHSADSATKTLRRILNL
Subjt:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNL

Query:  DVDNE
        DV NE
Subjt:  DVDNE

XP_016900729.1 PREDICTED: uncharacterized protein LOC107990294 [Cucumis melo]6.5e-8985.37Show/hide
Query:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS
        MEAVVV+EQHRNQYY RVKPHGPARFGSL SRDF GMNCRSFQSGAGILPTPLKACTSE +  YP SPKTPP  L+S S N KQLAT RSAPI IK K S
Subjt:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS

Query:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNL
        N++   +EEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEL RSAPEFEM HPSAKSAPPSPTRDQ+FS+R+FFHSADSATKTLRRILNL
Subjt:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNL

Query:  DVDNE
        DVDNE
Subjt:  DVDNE

TrEMBL top hitse value%identityAlignment
A0A0A0KHP6 Uncharacterized protein1.2e-9187.32Show/hide
Query:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS
        MEAVVV+EQHRNQYY RVKPHGPARFGSL SRDF GMNCRSFQSGAGILPTPLKAC SE +  YP SPKTPP CL+S S N KQLATMRSAPIPIK K S
Subjt:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS

Query:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNL
        N++ A +EEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEL RSAPEFEM HPSAKSAPPSPTRDQNFS+RFFFHSADSATKTLRRILNL
Subjt:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNL

Query:  DVDNE
        DV NE
Subjt:  DVDNE

A0A1S4DXL6 uncharacterized protein LOC1079902943.1e-8985.37Show/hide
Query:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS
        MEAVVV+EQHRNQYY RVKPHGPARFGSL SRDF GMNCRSFQSGAGILPTPLKACTSE +  YP SPKTPP  L+S S N KQLAT RSAPI IK K S
Subjt:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS

Query:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNL
        N++   +EEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEL RSAPEFEM HPSAKSAPPSPTRDQ+FS+R+FFHSADSATKTLRRILNL
Subjt:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNL

Query:  DVDNE
        DVDNE
Subjt:  DVDNE

A0A5A7UUU2 Nascent polypeptide-associated complex subunit alpha, muscle-specific form8.9e-6883.73Show/hide
Query:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS
        MEAVVV+EQHRNQYY RVKPHGPARFGSL SRDF GMNCRSFQSGAGILPTPLKACTSE +  YP SPKTPP  L+S S N KQLAT RSAPI IK K S
Subjt:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS

Query:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAK
        N++   +EEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEL RSAPEFEM HPSAK
Subjt:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAK

A0A5D3CPQ8 Nascent polypeptide-associated complex subunit alpha, muscle-specific form8.9e-6883.73Show/hide
Query:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS
        MEAVVV+EQHRNQYY RVKPHGPARFGSL SRDF GMNCRSFQSGAGILPTPLKACTSE +  YP SPKTPP  L+S S N KQLAT RSAPI IK K S
Subjt:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFS

Query:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAK
        N++   +EEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEL RSAPEFEM HPSAK
Subjt:  NKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEM-HPSAK

A0A6P4A757 uncharacterized protein LOC1074259506.4e-5864.29Show/hide
Query:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTP-PTCLSSISGNGKQLATMRSAPIPIKVKF
        ME +VVV QHRNQYY R KP GPAR+GS PSRDF G+NCRSFQS AG+LPTP KACTS   +   SSPKTP P+  S      + L   +S PI I V  
Subjt:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTP-PTCLSSISGNGKQLATMRSAPIPIKVKF

Query:  SNKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLELPRSAPEFEMHPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLR
        S+K    +EE  + + SFSELWAGP YSNSPPPSSLPIPKFSV  KRT SLELP SAPE EMHP AKSAPPSPTR+ N S R  F SA+ ATKTL+
Subjt:  SNKNGAVNEEFYDRSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLELPRSAPEFEMHPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02715.1 unknown protein1.3e-3445.19Show/hide
Query:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPS---SPKTPPTCLSSISGNGKQLATMRSAPIPIKV
        ME ++V  +HR+QYYG+ K  G  RF S PS+ F  +NCR+FQSG G+LP P +  ++   +G  S   SP++P + L     +   + + R++PIPI  
Subjt:  MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPS---SPKTPPTCLSSISGNGKQLATMRSAPIPIKV

Query:  KFSNKNGAVNEEFYD--RSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLELPRSAPEFEMHPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLR
           ++    + EF D  RS S+SELWAGPTYSNSPPP+S+PIPKFS+  KRT SL  P      ++   AKSAP SPT     S    F S  SAT TLR
Subjt:  KFSNKNGAVNEEFYD--RSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLELPRSAPEFEMHPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLR

Query:  RILNLDVD
        R+LNL+++
Subjt:  RILNLDVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAGTGGTCGTTGTTGAGCAGCATAGGAACCAATATTATGGTCGGGTCAAGCCACATGGGCCAGCTCGATTTGGGTCACTCCCGTCCCGAGACTTTAGTGGGAT
GAACTGTAGGAGTTTCCAATCTGGAGCTGGTATACTCCCAACTCCCTTGAAGGCTTGTACGTCTGAACCTAAACAGGGCTACCCTTCTTCACCCAAAACACCACCAACTT
GTTTAAGTTCCATCTCCGGAAATGGAAAACAACTTGCTACTATGCGGAGTGCTCCAATTCCTATCAAAGTCAAATTTTCAAACAAGAACGGTGCTGTAAATGAAGAATTC
TATGACCGGAGTTTCTCATTCTCTGAGCTTTGGGCTGGACCCACTTACTCAAACTCCCCGCCTCCAAGTTCATTACCTATTCCCAAATTTTCAGTTGCGAAAAGAACCAC
ATCACTGGAGTTGCCTCGATCTGCCCCTGAATTTGAAATGCATCCATCTGCTAAGTCTGCACCACCATCCCCAACTAGGGACCAAAACTTTTCCTCCAGATTTTTCTTTC
ATAGTGCTGACTCTGCGACCAAGACTCTGCGTCGCATTCTTAACCTTGATGTTGACAATGAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAGTGGTCGTTGTTGAGCAGCATAGGAACCAATATTATGGTCGGGTCAAGCCACATGGGCCAGCTCGATTTGGGTCACTCCCGTCCCGAGACTTTAGTGGGAT
GAACTGTAGGAGTTTCCAATCTGGAGCTGGTATACTCCCAACTCCCTTGAAGGCTTGTACGTCTGAACCTAAACAGGGCTACCCTTCTTCACCCAAAACACCACCAACTT
GTTTAAGTTCCATCTCCGGAAATGGAAAACAACTTGCTACTATGCGGAGTGCTCCAATTCCTATCAAAGTCAAATTTTCAAACAAGAACGGTGCTGTAAATGAAGAATTC
TATGACCGGAGTTTCTCATTCTCTGAGCTTTGGGCTGGACCCACTTACTCAAACTCCCCGCCTCCAAGTTCATTACCTATTCCCAAATTTTCAGTTGCGAAAAGAACCAC
ATCACTGGAGTTGCCTCGATCTGCCCCTGAATTTGAAATGCATCCATCTGCTAAGTCTGCACCACCATCCCCAACTAGGGACCAAAACTTTTCCTCCAGATTTTTCTTTC
ATAGTGCTGACTCTGCGACCAAGACTCTGCGTCGCATTCTTAACCTTGATGTTGACAATGAA
Protein sequenceShow/hide protein sequence
MEAVVVVEQHRNQYYGRVKPHGPARFGSLPSRDFSGMNCRSFQSGAGILPTPLKACTSEPKQGYPSSPKTPPTCLSSISGNGKQLATMRSAPIPIKVKFSNKNGAVNEEF
YDRSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLELPRSAPEFEMHPSAKSAPPSPTRDQNFSSRFFFHSADSATKTLRRILNLDVDNE