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MS020339 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020339
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSpindle pole body-associated protein
Genome locationscaffold665:1141947..1143893
RNA-Seq ExpressionMS020339
SyntenyMS020339
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011228.1 hypothetical protein SDJN02_26131 [Cucurbita argyrosperma subsp. argyrosperma]9.1e-6878.11Show/hide
Query:  LSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWT
        +  V LFLATSLRSHHFP  STQTLL+NF A+SQ VS TPKCT+FRRK+VVFGKQS+N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPWT
Subjt:  LSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWT

Query:  ITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
        ITLTG L+ ASSW +IKSIAVTAV+L++I  WWYIFLYSYPKAY++MIAERR+KV+DG EDTFGV++TQ
Subjt:  ITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ

XP_008449434.1 PREDICTED: uncharacterized protein LOC103491324 isoform X1 [Cucumis melo]1.2e-6779.65Show/hide
Query:  MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
        MGALSL+   LATSL S+HFPS STQTLL+NF A+SQ++S TPKCTKFR K +VFGKQS   N+SQFLDENGVVDDMDGYLNY S EYDSVWDTKPSWCQ
Subjt:  MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ

Query:  PWTITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
        PWTITLTGLL+ ASSW  IKS+AVTAVIL++I LWWYIFLYSYPKAYSEMIAERR+KV+DG EDTFGV++TQ
Subjt:  PWTITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ

XP_022145927.1 uncharacterized protein LOC111015275 [Momordica charantia]9.3e-8998.84Show/hide
Query:  MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
        MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTP+CTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
Subjt:  MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ

Query:  PWTITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
        PWTITLTGLLLTASSWFVIKSIAVTAVILS+IILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
Subjt:  PWTITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ

XP_022967429.1 uncharacterized protein LOC111466970 [Cucurbita maxima]8.2e-6978.82Show/hide
Query:  ALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW
        ++  V LFLATSLRSHHFP  STQTLL+NF A+SQVVS TPKCT+FRRK+VVFGKQS+N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPW
Subjt:  ALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW

Query:  TITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
        TITLTG L+ ASSW +IKSIAVTAV+L++I  WWYIFLYSYPKAYS+MIAERR+KV+DG EDTFGV++TQ
Subjt:  TITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ

XP_023553740.1 uncharacterized protein LOC111811218 [Cucurbita pepo subsp. pepo]6.3e-6979.29Show/hide
Query:  LSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWT
        +  V LFLATSLRSHHFP  STQTLL+NF A+SQVVS TPKCT+FRRK+VVFGKQS+N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPWT
Subjt:  LSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWT

Query:  ITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
        ITLTGLL+ ASSW +IKSIAVTAV+L++I  WWYIFLYSYPKAY++MIAERR+KV+DG EDTFGV++TQ
Subjt:  ITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ

TrEMBL top hitse value%identityAlignment
A0A0A0KED9 Uncharacterized protein9.2e-6677.33Show/hide
Query:  MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
        MGA+S    FLA+SLR + FPS STQTLL+NF A+SQ++S TP CTKFR K +VFGKQS N N+SQFLDENGVV+DMDGYLNY S EYDSVWDTKP+WCQ
Subjt:  MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ

Query:  PWTITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
        PWTITLTGLL+ ASSW  IKSIAVTAVIL++I LWWYIFLYSYPKAYSEMIAERR+KV+DG EDTFGV++TQ
Subjt:  PWTITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ

A0A1S3BLE6 uncharacterized protein LOC103491324 isoform X15.7e-6879.65Show/hide
Query:  MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
        MGALSL+   LATSL S+HFPS STQTLL+NF A+SQ++S TPKCTKFR K +VFGKQS   N+SQFLDENGVVDDMDGYLNY S EYDSVWDTKPSWCQ
Subjt:  MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ

Query:  PWTITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
        PWTITLTGLL+ ASSW  IKS+AVTAVIL++I LWWYIFLYSYPKAYSEMIAERR+KV+DG EDTFGV++TQ
Subjt:  PWTITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ

A0A6J1CY32 uncharacterized protein LOC1110152754.5e-8998.84Show/hide
Query:  MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
        MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTP+CTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
Subjt:  MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ

Query:  PWTITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
        PWTITLTGLLLTASSWFVIKSIAVTAVILS+IILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
Subjt:  PWTITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ

A0A6J1HI50 uncharacterized protein LOC1114638035.7e-6877.51Show/hide
Query:  LSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWT
        +  V LFLATSLRSHHFP  STQTLL+NF A+SQ VS TPKCT+FRRK+VVFGKQS+N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPWT
Subjt:  LSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWT

Query:  ITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
        +TLTG L+ ASSW +IKSIAVTAV+L++I  WWYIFLYSYPKAY++MIAERR+KV+DG EDTFGV++TQ
Subjt:  ITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ

A0A6J1HWP2 uncharacterized protein LOC1114669704.0e-6978.82Show/hide
Query:  ALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW
        ++  V LFLATSLRSHHFP  STQTLL+NF A+SQVVS TPKCT+FRRK+VVFGKQS+N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPW
Subjt:  ALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW

Query:  TITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ
        TITLTG L+ ASSW +IKSIAVTAV+L++I  WWYIFLYSYPKAYS+MIAERR+KV+DG EDTFGV++TQ
Subjt:  TITLTGLLLTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02725.1 unknown protein1.5e-3954.11Show/hide
Query:  TQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTITLTGLLLTASSWFVIKSIAV
        T+ LL+     + + S   K  +   K   FG       +S+F+DE GVVDDM+G+L+ LSLEYDSVWDTKPSWCQPWTI LTGL + A SW ++ S+ V
Subjt:  TQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTITLTGLLLTASSWFVIKSIAV

Query:  TAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRK
        +++ + +I  WWYIFLYSYPK+YSEMIAERRK+V DG ED +G  K
Subjt:  TAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRK

AT4G02725.2 unknown protein1.8e-2951.24Show/hide
Query:  TQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTITLTGLLLTASSWFVIKSIAV
        T+ LL+     + + S   K  +   K   FG       +S+F+DE GVVDDM+G+L+ LSLEYDSVWDTKPSWCQPWTI LTGL + A SW ++ S+ V
Subjt:  TQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTITLTGLLLTASSWFVIKSIAV

Query:  TAVILSIIILWWYIFLYSYPK
        +++ + +I  WWYIFLYSYPK
Subjt:  TAVILSIIILWWYIFLYSYPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTCTTTCTCTTGTCCCTCTGTTCCTTGCAACTTCTTTACGTTCCCACCATTTTCCTTCAATTTCAACACAGACTCTTCTCGCGAACTTCGTTGCTACGTCACA
AGTCGTTTCCTTGACTCCCAAATGTACAAAATTCCGCAGGAAAAATGTCGTTTTTGGGAAGCAATCAAACAACGCGAACGAGTCTCAGTTTTTAGACGAAAATGGCGTCG
TCGATGATATGGATGGATATTTAAATTATCTCTCTCTCGAATATGACTCCGTTTGGGATACGAAACCTTCATGGTGTCAACCATGGACGATAACACTGACAGGACTATTA
CTGACTGCCTCTAGCTGGTTTGTTATAAAGTCGATAGCAGTGACTGCAGTAATACTGTCCATAATAATCTTGTGGTGGTACATCTTTCTTTACTCATATCCGAAGGCTTA
TTCTGAAATGATTGCGGAGCGAAGAAAAAAGGTTACAGATGGAGACGAAGACACATTTGGTGTGAGAAAGACTCAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTCTTTCTCTTGTCCCTCTGTTCCTTGCAACTTCTTTACGTTCCCACCATTTTCCTTCAATTTCAACACAGACTCTTCTCGCGAACTTCGTTGCTACGTCACA
AGTCGTTTCCTTGACTCCCAAATGTACAAAATTCCGCAGGAAAAATGTCGTTTTTGGGAAGCAATCAAACAACGCGAACGAGTCTCAGTTTTTAGACGAAAATGGCGTCG
TCGATGATATGGATGGATATTTAAATTATCTCTCTCTCGAATATGACTCCGTTTGGGATACGAAACCTTCATGGTGTCAACCATGGACGATAACACTGACAGGACTATTA
CTGACTGCCTCTAGCTGGTTTGTTATAAAGTCGATAGCAGTGACTGCAGTAATACTGTCCATAATAATCTTGTGGTGGTACATCTTTCTTTACTCATATCCGAAGGCTTA
TTCTGAAATGATTGCGGAGCGAAGAAAAAAGGTTACAGATGGAGACGAAGACACATTTGGTGTGAGAAAGACTCAG
Protein sequenceShow/hide protein sequence
MGALSLVPLFLATSLRSHHFPSISTQTLLANFVATSQVVSLTPKCTKFRRKNVVFGKQSNNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTITLTGLL
LTASSWFVIKSIAVTAVILSIIILWWYIFLYSYPKAYSEMIAERRKKVTDGDEDTFGVRKTQ