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MS020387 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020387
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSynechocystis YCF37
Genome locationscaffold211:162221..162712
RNA-Seq ExpressionMS020387
SyntenyMS020387
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571416.1 hypothetical protein SDJN03_30331, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6185.28Show/hide
Query:  MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAE
        MAST SPILQIL+PRCR+N TVRAA VK  PESLSA  TRRQ LL  TAT A+  RENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKG+ETAE
Subjt:  MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAE

Query:  RGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
        RGIVTAE+GI  AER IETAEKEIE+A+NFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Subjt:  RGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ

XP_004148045.1 uncharacterized protein LOC101208092 [Cucumis sativus]7.1e-6285.63Show/hide
Query:  MASTS-SPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFF--TATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIE
        MAST+ SP LQILRPRCR++ TVRAA VK   ESLSA  TRRQ LLF   TATAA+  RENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKG+E
Subjt:  MASTS-SPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFF--TATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIE

Query:  TAERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI AAEREIETAEKEIETA+NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS

XP_008457854.1 PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo]1.1e-6286.06Show/hide
Query:  MASTS-SPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETA
        MAST+ SP LQILRPRCR++ TVRAA VK   ESLSA  TRRQ LLF TATAA+  RENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKG+ETA
Subjt:  MASTS-SPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETA

Query:  ERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        ERGIVTAE+GI AAEREIETAEKEIETA++FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  ERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS

XP_022158696.1 uncharacterized protein LOC111025160 [Momordica charantia]1.5e-75100Show/hide
Query:  MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAE
        MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAE
Subjt:  MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAE

Query:  RGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        RGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Subjt:  RGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS

XP_022971729.1 uncharacterized protein LOC111470397 [Cucurbita maxima]3.5e-6184.94Show/hide
Query:  MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFF--TATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIET
        MAST SPILQIL+PRCR+N TVRAA VK  PESLSA  TRRQ LL    TATAA+  RENPSMAE+IPLFGLRKKLKKVEEEAEEIVREGFEAAEKG+ET
Subjt:  MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFF--TATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIET

Query:  AERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        AERGIVTAE+GI  AER IETAEKEIE+A+NFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Subjt:  AERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS

TrEMBL top hitse value%identityAlignment
A0A0A0LJU7 Uncharacterized protein3.4e-6285.63Show/hide
Query:  MASTS-SPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFF--TATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIE
        MAST+ SP LQILRPRCR++ TVRAA VK   ESLSA  TRRQ LLF   TATAA+  RENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKG+E
Subjt:  MASTS-SPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFF--TATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIE

Query:  TAERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI AAEREIETAEKEIETA+NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS

A0A1S3C6G5 uncharacterized protein LOC1034974395.3e-6386.06Show/hide
Query:  MASTS-SPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETA
        MAST+ SP LQILRPRCR++ TVRAA VK   ESLSA  TRRQ LLF TATAA+  RENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKG+ETA
Subjt:  MASTS-SPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETA

Query:  ERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        ERGIVTAE+GI AAEREIETAEKEIETA++FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  ERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS

A0A5D3CRC5 Synechocystis YCF375.3e-6386.06Show/hide
Query:  MASTS-SPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETA
        MAST+ SP LQILRPRCR++ TVRAA VK   ESLSA  TRRQ LLF TATAA+  RENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKG+ETA
Subjt:  MASTS-SPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETA

Query:  ERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        ERGIVTAE+GI AAEREIETAEKEIETA++FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  ERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS

A0A6J1E1P9 uncharacterized protein LOC1110251607.1e-76100Show/hide
Query:  MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAE
        MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAE
Subjt:  MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAE

Query:  RGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        RGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Subjt:  RGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS

A0A6J1I9D9 uncharacterized protein LOC1114703971.7e-6184.94Show/hide
Query:  MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFF--TATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIET
        MAST SPILQIL+PRCR+N TVRAA VK  PESLSA  TRRQ LL    TATAA+  RENPSMAE+IPLFGLRKKLKKVEEEAEEIVREGFEAAEKG+ET
Subjt:  MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFF--TATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIET

Query:  AERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        AERGIVTAE+GI  AER IETAEKEIE+A+NFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Subjt:  AERGIVTAERGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23670.1 homolog of Synechocystis YCF377.4e-3354.49Show/hide
Query:  LRPRCRVNTTVRAAVVKLQPESLSA----GTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAERGIVTAE
        L+ RC     V          +LS+    G +RR  L   TA   +   +  SMAE+IPLFG+RKKLKK EEEA EIV+EGFE AEKG++        AE
Subjt:  LRPRCRVNTTVRAAVVKLQPESLSA----GTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAERGIVTAE

Query:  RGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
        +G+EAAER +ETAEKEI TA++F  L+QAGAV  AE VGVLVATS+VNGILGPE Q
Subjt:  RGIEAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACAAGCTCACCAATCCTCCAAATTCTCCGACCCCGATGCCGAGTAAACACCACCGTCCGCGCCGCCGTTGTGAAATTGCAGCCGGAATCTCTCTCCGCCGG
CACAACGCGGCGGCAGGCGCTGCTGTTTTTCACTGCGACGGCGGCGATTGCGGCGAGAGAGAATCCGTCAATGGCAGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGC
TGAAGAAGGTGGAGGAGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGAATCGAGACGGCGGAGCGAGGGATCGTAACGGCGGAGCGGGGAATC
GAGGCGGCTGAGAGAGAGATCGAAACGGCGGAGAAAGAGATCGAAACGGCGCTGAATTTCGGTGCGCTGTCGCAGGCAGGGGCGGTCGCCGGAGCTGAGGTAGTCGGAGT
TCTCGTCGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGTCAGAGT
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACAAGCTCACCAATCCTCCAAATTCTCCGACCCCGATGCCGAGTAAACACCACCGTCCGCGCCGCCGTTGTGAAATTGCAGCCGGAATCTCTCTCCGCCGG
CACAACGCGGCGGCAGGCGCTGCTGTTTTTCACTGCGACGGCGGCGATTGCGGCGAGAGAGAATCCGTCAATGGCAGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGC
TGAAGAAGGTGGAGGAGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGAATCGAGACGGCGGAGCGAGGGATCGTAACGGCGGAGCGGGGAATC
GAGGCGGCTGAGAGAGAGATCGAAACGGCGGAGAAAGAGATCGAAACGGCGCTGAATTTCGGTGCGCTGTCGCAGGCAGGGGCGGTCGCCGGAGCTGAGGTAGTCGGAGT
TCTCGTCGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGTCAGAGT
Protein sequenceShow/hide protein sequence
MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGIETAERGIVTAERGI
EAAEREIETAEKEIETALNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS