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MS020390 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020390
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein JINGUBANG-like isoform X3
Genome locationscaffold211:181960..182409
RNA-Seq ExpressionMS020390
SyntenyMS020390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7828779.1 uncharacterized protein G2W53_019943 [Senna tora]3.5e-0760.71Show/hide
Query:  MFGSFTLKLPPPHLDAAVGGSGEHQSVDTGDESVDGVVVSLNRFQTFRVGNSPDLE
        M GSF L LPPPHL  AV G+G  QSV +  + V+GVVVS   FQ F VG SPDLE
Subjt:  MFGSFTLKLPPPHLDAAVGGSGEHQSVDTGDESVDGVVVSLNRFQTFRVGNSPDLE

QEX51262.1 protein JINGUBANG-like isoform X3, partial [Cymbidium ensifolium]2.0e-1040.74Show/hide
Query:  KFMASQRSAVRQRL---LPLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRLREEMFGSFTLKLPPPHLDAAVGGSGEHQSVDT-GDESVDGVVVSLN
        +FM  Q  A+ + L   LPLPEIDE +GG AV  R    D + GD   L  Q L+  +  S  L+ P PHL  A+G +GE +  +  GD  VDGV+V   
Subjt:  KFMASQRSAVRQRL---LPLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRLREEMFGSFTLKLPPPHLDAAVGGSGEHQSVDT-GDESVDGVVVSLN

Query:  RFQTFRVG
          +  RVG
Subjt:  RFQTFRVG

QEX51263.1 protein JINGUBANG-like isoform X4, partial [Cymbidium ensifolium]1.0e-0632.24Show/hide
Query:  QHRQARVLRR--RPLPHADPHIGGAAQQQAAGGGQTENRKFMASQRSAVRQRLLPLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRL---REEMFGS
        QHR+  V      P PHA   IG + + Q    GQT++R+FMA Q S   Q +LP PE    +   AV + R     +S       HQ L          
Subjt:  QHRQARVLRR--RPLPHADPHIGGAAQQQAAGGGQTENRKFMASQRSAVRQRLLPLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRL---REEMFGS

Query:  FTLKLPPPHLDAAVGGSGEHQSVDTGDESVDGVVVSLNRFQTFRVGNSPDLE
           +L PPHL+  VG +GE++ V+     ++ V+V ++R +   +GN P+ E
Subjt:  FTLKLPPPHLDAAVGGSGEHQSVDTGDESVDGVVVSLNRFQTFRVGNSPDLE

TrEMBL top hitse value%identityAlignment
A0A0D3CNY2 Uncharacterized protein2.0e-0830.52Show/hide
Query:  VAGQHRQARVLRRRPLPHADPHIGGAAQQQAAGGGQTENRKFMASQRSAVRQRLL--PLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRLREEMFGS
        +  Q+R  RV      PHA   I    + Q +   + E+ K M  + + + Q  L   LP I  +V    +H  R +   +S +  FL  Q L + M  +
Subjt:  VAGQHRQARVLRRRPLPHADPHIGGAAQQQAAGGGQTENRKFMASQRSAVRQRLL--PLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRLREEMFGS

Query:  FTLKLPPPHLDAAVGGSGEHQSV--DTGDESVDGVVVSLNRFQTFRVGNSPDLE
            LP P+L+ ++G + E +++   +G + VDGV++S NRFQTF++ N+P+L+
Subjt:  FTLKLPPPHLDAAVGGSGEHQSV--DTGDESVDGVVVSLNRFQTFRVGNSPDLE

A0A5J6N997 Protein JINGUBANG-like isoform X4 (Fragment)4.9e-0732.24Show/hide
Query:  QHRQARVLRR--RPLPHADPHIGGAAQQQAAGGGQTENRKFMASQRSAVRQRLLPLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRL---REEMFGS
        QHR+  V      P PHA   IG + + Q    GQT++R+FMA Q S   Q +LP PE    +   AV + R     +S       HQ L          
Subjt:  QHRQARVLRR--RPLPHADPHIGGAAQQQAAGGGQTENRKFMASQRSAVRQRLLPLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRL---REEMFGS

Query:  FTLKLPPPHLDAAVGGSGEHQSVDTGDESVDGVVVSLNRFQTFRVGNSPDLE
           +L PPHL+  VG +GE++ V+     ++ V+V ++R +   +GN P+ E
Subjt:  FTLKLPPPHLDAAVGGSGEHQSVDTGDESVDGVVVSLNRFQTFRVGNSPDLE

A0A5J6NB00 Protein JINGUBANG-like isoform X3 (Fragment)9.6e-1140.74Show/hide
Query:  KFMASQRSAVRQRL---LPLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRLREEMFGSFTLKLPPPHLDAAVGGSGEHQSVDT-GDESVDGVVVSLN
        +FM  Q  A+ + L   LPLPEIDE +GG AV  R    D + GD   L  Q L+  +  S  L+ P PHL  A+G +GE +  +  GD  VDGV+V   
Subjt:  KFMASQRSAVRQRL---LPLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRLREEMFGSFTLKLPPPHLDAAVGGSGEHQSVDT-GDESVDGVVVSLN

Query:  RFQTFRVG
          +  RVG
Subjt:  RFQTFRVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGCCGGTCAGCACCGACAAGCACGCGTGCTCCGACGCCGTCCTCTGCCACACGCAGATCCCCATATCGGCGGAGCCGCTCAGCAACAGGCGGCCGGCGGTGGCCAAAC
AGAGAATCGCAAGTTTATGGCCTCGCAGAGATCCGCTGTGCGACAGAGACTTCTCCCGCTCCCAGAAATTGACGAGTCCGTCGGAGGAGCCGCAGTACACAAACGACGCC
TCCTCGTTGACGGCGAGAGCGGTGATGGCGCATTCCTGCTTCACCAGCGTCTGCGAGAAGAAATGTTTGGTTCCTTTACCTTGAAGCTCCCGCCGCCACACCTTGACGCT
GCCGTCGGCGGATCCGGTGAACACCAATCCGTCGATACTGGAGACGAGAGTGTTGACGGCGTCGTCGTGAGCCTGAATCGATTCCAAACATTTCGAGTCGGAAACTCTCC
AGACCTTGAA
mRNA sequenceShow/hide mRNA sequence
GTGGCCGGTCAGCACCGACAAGCACGCGTGCTCCGACGCCGTCCTCTGCCACACGCAGATCCCCATATCGGCGGAGCCGCTCAGCAACAGGCGGCCGGCGGTGGCCAAAC
AGAGAATCGCAAGTTTATGGCCTCGCAGAGATCCGCTGTGCGACAGAGACTTCTCCCGCTCCCAGAAATTGACGAGTCCGTCGGAGGAGCCGCAGTACACAAACGACGCC
TCCTCGTTGACGGCGAGAGCGGTGATGGCGCATTCCTGCTTCACCAGCGTCTGCGAGAAGAAATGTTTGGTTCCTTTACCTTGAAGCTCCCGCCGCCACACCTTGACGCT
GCCGTCGGCGGATCCGGTGAACACCAATCCGTCGATACTGGAGACGAGAGTGTTGACGGCGTCGTCGTGAGCCTGAATCGATTCCAAACATTTCGAGTCGGAAACTCTCC
AGACCTTGAA
Protein sequenceShow/hide protein sequence
VAGQHRQARVLRRRPLPHADPHIGGAAQQQAAGGGQTENRKFMASQRSAVRQRLLPLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRLREEMFGSFTLKLPPPHLDA
AVGGSGEHQSVDTGDESVDGVVVSLNRFQTFRVGNSPDLE