CuGenDBv2

Gene ID	MS020409
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger CCCH domain-containing protein 62
Genome location	scaffold211:355761..358821
RNA-Seq Expression	MS020409
Synteny	MS020409
Gene Ontology terms	GO:0006807 - nitrogen compound metabolic process (biological process) GO:0044238 - primary metabolic process (biological process) GO:0044260 - cellular macromolecule metabolic process (biological process)
InterPro domains	IPR003034 - SAP domain IPR036361 - SAP domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KGN62051.1 hypothetical protein Csa_006128 [Cucumis sativus]

5.9e-115

74.92

Show/hide

Query:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEE----ESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENG
        MT RG+KR+ ICISSSS  D D++E    DDE+    +S+E++D++DDDEGES EE+DNE SD+ CD+VLS+RVIRFLKENKNLDSLTL DCKAYLRE+ 
Subjt:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEE----ESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENG

Query:  LRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRG
        LRIAGTK+VCIQR++EHWR+K+ NGE QYP+SSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA+KQQHTFTVEVLWSRG
Subjt:  LRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRG

Query:  VRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRR
        VRKL PLYPLLVKGRNLYKLRTFR LWNDEAER+Q LAEKH+RG AAR LRAM+ +KR  +QT+G  +NQ H H ARQ L SKE  +RM S+  N V+RR
Subjt:  VRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRR

Query:  HPT
        H T
Subjt:  HPT

XP_022158231.1 zinc finger CCCH domain-containing protein 62 [Momordica charantia]

3.3e-158

99.33

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Query:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA
        MTDRGNKRSFICISSSSDDDDD+DEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA
Subjt:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA

Query:  GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL
        GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL
Subjt:  GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL

Query:  PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT
        PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRK NFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT
Subjt:  PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT

XP_022971662.1 zinc finger CCCH domain-containing protein 62 isoform X1 [Cucurbita maxima]

2.0e-115

76.51

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Query:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA
        M +RG+KR  + + SSS+           DDEEESDE+YD+EDDDEGESE+E+DNE SD+DCD+VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIA
Subjt:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA

Query:  GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL
        GTK+VCIQR++EHWRMKD NGE  YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKESYGA+KQQHTFTVEVLWSRGVRKL
Subjt:  GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL

Query:  PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP
        PPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRGAAAR +RA++ RKR  LQ  G  KNQ      RQ LNS  S K M+S+ KN  +RRHP
Subjt:  PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP

XP_023512636.1 zinc finger CCCH domain-containing protein 62 [Cucurbita pepo subsp. pepo]

1.8e-116

77.18

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Query:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA
        M +RG+KR  I +SSSS++          DDEEESDE+YD+EDDDEGESEEE+DN  SD+DCD+VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIA
Subjt:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA

Query:  GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL
        GTK+VCIQR++EHWRMKD NGEA YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKESYGA+KQQHTFTVEVLWS GVRKL
Subjt:  GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL

Query:  PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP
        PPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRGAAAR +RA++ RKR  +Q  G  KNQ H    RQ LNS  S K M+S+ KN  +RRHP
Subjt:  PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP

XP_038902878.1 zinc finger CCCH domain-containing protein 62-like [Benincasa hispida]

2.0e-118

76.19

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Query:  RGNKRSFICISSSSDDDDDDDEVSCGDDEE-------------ESDEQYDEEDDD--------------EGESEEEYDNEGSDDDCDDVLSERVIRFLKE
        + +KR  ICISSSSDDD     +SCGDDEE             ES+E++D+EDDD              EGESEEE+DNE SD+DCD+VLSERVIRFLKE
Subjt:  RGNKRSFICISSSSDDDDDDDEVSCGDDEE-------------ESDEQYDEEDDD--------------EGESEEEYDNEGSDDDCDDVLSERVIRFLKE

Query:  NKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE
        NKNLDSLTL DCKAYLREN LRIAGTK+VCIQR+ EHWRMKD NGEA YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE
Subjt:  NKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE

Query:  SYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTL
        SYGA+KQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRGAAAR LRAM+ +KR F QT G  KNQ H H ARQ L
Subjt:  SYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTL

Query:  NSKESSKRMQSKGKN
        NSKES KRM S+  N
Subjt:  NSKESSKRMQSKGKN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQ19 SAP domain-containing protein

2.9e-115

74.92

Show/hide

Query:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEE----ESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENG
        MT RG+KR+ ICISSSS  D D++E    DDE+    +S+E++D++DDDEGES EE+DNE SD+ CD+VLS+RVIRFLKENKNLDSLTL DCKAYLRE+ 
Subjt:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEE----ESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENG

Query:  LRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRG
        LRIAGTK+VCIQR++EHWR+K+ NGE QYP+SSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA+KQQHTFTVEVLWSRG
Subjt:  LRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRG

Query:  VRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRR
        VRKL PLYPLLVKGRNLYKLRTFR LWNDEAER+Q LAEKH+RG AAR LRAM+ +KR  +QT+G  +NQ H H ARQ L SKE  +RM S+  N V+RR
Subjt:  VRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRR

Query:  HPT
        H T
Subjt:  HPT

A0A1S4E1S9 zinc finger CCCH domain-containing protein 62-like isoform X1

5.4e-114

75.16

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Query:  MTDRGNKRSFICISSSSDDDD------DDDEVSCGDDEEESDEQYD-----EEDDDEGESEEEYDNEGSDDDCDD-VLSERVIRFLKENKNLDSLTLKDC
        M+ RG+KR+ ICISSSSDDD+      DD++   GD EEE  ++ D     EEDDDEGES EE+D+E SD+ CD+ VLS+RVIRFLKENKNLDSLTL DC
Subjt:  MTDRGNKRSFICISSSSDDDD------DDDEVSCGDDEEESDEQYD-----EEDDDEGESEEEYDNEGSDDDCDD-VLSERVIRFLKENKNLDSLTLKDC

Query:  KAYLRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFT
        KAYLREN LRIAGTK+VCIQR++EHWR+KD NGE QYPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA+KQQHTFT
Subjt:  KAYLRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFT

Query:  VEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSK
        VEVLW RGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKH+RGAAAR LRAM+ +KR  +QT+G  KNQ H H ARQ L SKE  +RM S+
Subjt:  VEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSK

Query:  GKNKVL
          N  +
Subjt:  GKNKVL

A0A1S4E1T3 zinc finger CCCH domain-containing protein 62-like isoform X3

7.0e-114

75.24

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Query:  MTDRGNKRSFICISSSSDDDD------DDDEVSCGDDEEESDEQYD-----EEDDDEGESEEEYDNEGSDDDCDD-VLSERVIRFLKENKNLDSLTLKDC
        M+ RG+KR+ ICISSSSDDD+      DD++   GD EEE  ++ D     EEDDDEGES EE+D+E SD+ CD+ VLS+RVIRFLKENKNLDSLTL DC
Subjt:  MTDRGNKRSFICISSSSDDDD------DDDEVSCGDDEEESDEQYD-----EEDDDEGESEEEYDNEGSDDDCDD-VLSERVIRFLKENKNLDSLTLKDC

Query:  KAYLRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFT
        KAYLREN LRIAGTK+VCIQR++EHWR+KD NGE QYPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA+KQQHTFT
Subjt:  KAYLRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFT

Query:  VEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSK
        VEVLW RGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKH+RGAAAR LRAM+ +KR  +QT+G  KNQ H H ARQ L SKE  +RM S+
Subjt:  VEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSK

Query:  GKNKVLR
          N   R
Subjt:  GKNKVLR

A0A6J1E0C9 zinc finger CCCH domain-containing protein 62

1.6e-158

99.33

Show/hide

Query:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA
        MTDRGNKRSFICISSSSDDDDD+DEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA
Subjt:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA

Query:  GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL
        GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL
Subjt:  GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL

Query:  PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT
        PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRK NFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT
Subjt:  PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT

A0A6J1I2K8 zinc finger CCCH domain-containing protein 62 isoform X1

9.8e-116

76.51

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Query:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA
        M +RG+KR  + + SSS+           DDEEESDE+YD+EDDDEGESE+E+DNE SD+DCD+VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIA
Subjt:  MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIA

Query:  GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL
        GTK+VCIQR++EHWRMKD NGE  YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKESYGA+KQQHTFTVEVLWSRGVRKL
Subjt:  GTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKL

Query:  PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP
        PPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRGAAAR +RA++ RKR  LQ  G  KNQ      RQ LNS  S K M+S+ KN  +RRHP
Subjt:  PPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP

SwissProt top hits

e value

%identity

Alignment

Q338N2 Zinc finger CCCH domain-containing protein 62

8.5e-40

38.72

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Query:  DDDDDDDEVSCGDDEEESDEQYD--EEDDDEGES--------EEEYDN------EGSDDDCDDVLSERVIRF----------------------------
        +++  ++EV   D+EEE  E YD  EEDD E  S           YD+         D + D VL  R+ R                             
Subjt:  DDDDDDDEVSCGDDEEESDEQYD--EEDDDEGES--------EEEYDN------EGSDDDCDDVLSERVIRF----------------------------

Query:  --LKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTR--HGGLIGKRTV
          L  +  L+ L + +CKAYLR + LR++G K V + RIR    +K   GE +YP SSFV+NC GD C+GDVV+F Q +Y +     R   G L G+RT 
Subjt:  --LKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTR--HGGLIGKRTV

Query:  AGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHF
        AGR++KESYG  KQQHTFT+E+LWSRG +  PPL+PLL+KGRNLYK +T RQ W DE ER + L EKH RG  AR  R +R + +         +N+R  
Subjt:  AGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHF

Query:  HPARQTLNSKESSKRMQSKGKNKVLRRH
           R   N  +    M  K    V  +H
Subjt:  HPARQTLNSKESSKRMQSKGKNKVLRRH

Arabidopsis top hits

e value

%identity

Alignment

AT5G66840.1 SAP domain-containing protein

1.0e-64

47.33

Show/hide

Query:  ICISSSSDDDDDDDEVSCGDDEEESDE---------QYDEEDDDEGESEEEYDN---EGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLR
        +C S   ++D   DE +  + EEE DE          +  +DDD  ES+ E D    +G +DD D+   ++V R L    +L S+ +K+CKAYLR++GLR
Subjt:  ICISSSSDDDDDDDEVSCGDDEEESDE---------QYDEEDDDEGESEEEYDN---EGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLR

Query:  IAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVR
        ++GTK VCI RI EHWR+KD  GEA YP+SSF +NC GDVC+GD+VLFTQKV+ K++K+ + G ++G+RTVAG+VVKESYG  KQQHTFT+EVLW  G +
Subjt:  IAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVR

Query:  KLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHF-HPARQTLNSKESSKRMQSKGKNKVLRRH
        KLPPLYPLLVKGRNLY+L T RQ W +E +R++VL EKH RGAAAR +   R  K  ++  +G ++   H   P +      E  + +  + +      H
Subjt:  KLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHF-HPARQTLNSKESSKRMQSKGKNKVLRRH

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTGACAGGGGAAACAAGCGAAGTTTCATTTGCATCTCATCGTCGTCAGACGACGACGACGACGACGACGAGGTCTCCTGTGGCGACGACGAAGAGGAATCAGATGA
GCAGTATGATGAAGAAGACGATGACGAAGGGGAATCGGAAGAGGAGTACGATAATGAGGGCAGCGACGACGATTGTGACGACGTTCTCTCCGAGCGAGTTATCCGATTTC
TAAAAGAGAATAAAAATTTGGATTCATTGACACTTAAAGACTGCAAAGCTTATTTACGGGAGAATGGGTTGAGAATAGCAGGGACTAAATCCGTCTGTATTCAAAGAATC
AGGGAGCATTGGAGGATGAAAGATGAAAATGGTGAAGCACAGTATCCAAGGTCATCCTTTGTTGTCAATTGCACTGGTGATGTTTGTAGGGGAGATGTTGTTTTGTTCAC
TCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCATGGAGGGCTTATAGGAAAGAGAACTGTAGCAGGGAGAGTAGTTAAGGAGAGCTATGGTGCAACCAAACAGC
AGCATACTTTTACAGTCGAAGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTCGTGAAGGGTCGAAATCTATATAAACTAAGAACTTTTAGA
CAGCTTTGGAATGATGAAGCAGAAAGACTTCAAGTTCTTGCCGAAAAGCACAAAAGAGGTGCGGCTGCTCGGAGTTTACGAGCAATGCGGACAAGGAAAAGAAATTTTCT
TCAAACAGAAGGAGGTGTAAAAAATCAAAGACATTTCCATCCTGCAAGACAAACCTTGAACAGTAAAGAGAGCAGCAAGAGGATGCAGTCAAAGGGCAAGAACAAGGTTC
TACGTAGACATCCAACA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MTDRGNKRSFICISSSSDDDDDDDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRI
REHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFR
QLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKRNFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT

MS020409 (gene) of Bitter gourd (TR) v1 genome