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MS020410 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020410
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RALF-like 34
Genome locationscaffold211:361689..362063
RNA-Seq ExpressionMS020410
SyntenyMS020410
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571407.1 Protein RALF-like 34, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3872.58Show/hide
Query:  STILFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTH
        S +LF      +LL LS+A AHL VDTSLKLM+DALEWPTT ++  D   D D DD   D    RRSLFW RV YYISYGALAANRIPCPPRSGRPYYTH
Subjt:  STILFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTH

Query:  NCYKARGPVNPYTRGCSAITRCRR
        NCYKARGPVNPY+RGCSAITRCRR
Subjt:  NCYKARGPVNPYTRGCSAITRCRR

XP_004148071.1 protein RALF-like 34 [Cucumis sativus]2.8e-4279.34Show/hide
Query:  LLLP-FT-ILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCY
        LL P FT +LLFLSS+ AHLSVDTSLKLM+DALEWPTTT+L      D D DDD       RRSLFWRRV YYISYGAL+ANRIPCPPRSGRPYYTHNCY
Subjt:  LLLP-FT-ILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCY

Query:  KARGPVNPYTRGCSAITRCRR
        KARGPVNPYTRGCSAITRCRR
Subjt:  KARGPVNPYTRGCSAITRCRR

XP_008457868.1 PREDICTED: protein RALF-like 34 [Cucumis melo]4.8e-4276.42Show/hide
Query:  TILFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHN
        ++LFLL    +LLFLSS+ AHLSVDTSLKLM+DALEWPTTT+L      D D DDD       RRSLFWRRV YYISYGAL+ANRIPCPPRSGRPYYTHN
Subjt:  TILFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHN

Query:  CYKARGPVNPYTRGCSAITRCRR
        CYKARGPVNPY+RGCSAITRCRR
Subjt:  CYKARGPVNPYTRGCSAITRCRR

XP_022928024.1 protein RALF-like 34 [Cucurbita moschata]2.2e-3974.19Show/hide
Query:  LLLPF--TILLFLSSAGAHLSVDTSLKLMSDALEWPTTTA---LFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTH
        LL PF   +LL LS+A AHL VDTSLKLM+DALEWPTT +   L HD   D D D D       RRSLFW RV YYISYGALAANRIPCPPRSGRPYYTH
Subjt:  LLLPF--TILLFLSSAGAHLSVDTSLKLMSDALEWPTTTA---LFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTH

Query:  NCYKARGPVNPYTRGCSAITRCRR
        NCYKARGPVNPY+RGCSAITRCRR
Subjt:  NCYKARGPVNPYTRGCSAITRCRR

XP_038900702.1 protein RALF-like 34 [Benincasa hispida]2.1e-4580Show/hide
Query:  FLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCYK
        FLLL FTILLF+SS+ AHLSVDTSLKLM+DALEWPTTT+L     A   DDD+       RRSLFWRRV YYISYGALAANRIPCPPRSGRPYYTHNCYK
Subjt:  FLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCYK

Query:  ARGPVNPYTRGCSAITRCRR
        ARGPVNPY+RGCSAITRCRR
Subjt:  ARGPVNPYTRGCSAITRCRR

TrEMBL top hitse value%identityAlignment
A0A0A0LMS2 Uncharacterized protein1.3e-4279.34Show/hide
Query:  LLLP-FT-ILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCY
        LL P FT +LLFLSS+ AHLSVDTSLKLM+DALEWPTTT+L      D D DDD       RRSLFWRRV YYISYGAL+ANRIPCPPRSGRPYYTHNCY
Subjt:  LLLP-FT-ILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCY

Query:  KARGPVNPYTRGCSAITRCRR
        KARGPVNPYTRGCSAITRCRR
Subjt:  KARGPVNPYTRGCSAITRCRR

A0A1S3C7S7 protein RALF-like 342.3e-4276.42Show/hide
Query:  TILFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHN
        ++LFLL    +LLFLSS+ AHLSVDTSLKLM+DALEWPTTT+L      D D DDD       RRSLFWRRV YYISYGAL+ANRIPCPPRSGRPYYTHN
Subjt:  TILFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHN

Query:  CYKARGPVNPYTRGCSAITRCRR
        CYKARGPVNPY+RGCSAITRCRR
Subjt:  CYKARGPVNPYTRGCSAITRCRR

A0A6J1EJN3 protein RALF-like 341.1e-3974.19Show/hide
Query:  LLLPF--TILLFLSSAGAHLSVDTSLKLMSDALEWPTTTA---LFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTH
        LL PF   +LL LS+A AHL VDTSLKLM+DALEWPTT +   L HD   D D D D       RRSLFW RV YYISYGALAANRIPCPPRSGRPYYTH
Subjt:  LLLPF--TILLFLSSAGAHLSVDTSLKLMSDALEWPTTTA---LFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTH

Query:  NCYKARGPVNPYTRGCSAITRCRR
        NCYKARGPVNPY+RGCSAITRCRR
Subjt:  NCYKARGPVNPYTRGCSAITRCRR

A0A6P4A840 protein RALF-like 345.0e-3768.6Show/hide
Query:  LFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCY
        L  L  F ILL L S       DTSLKLMSDALEWPTT + F+D+  + D++++  D A  RRSLFWRR+RYYISYGAL+ANRIPCPPRSGR YYTHNC+
Subjt:  LFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCY

Query:  KARGPVNPYTRGCSAITRCRR
        KARGPV+PYTRGCS ITRCRR
Subjt:  KARGPVNPYTRGCSAITRCRR

I1LHE0 Uncharacterized protein3.6e-3563.41Show/hide
Query:  LLPFTILLFLSSAGAHLSV-----DTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHN
        LL   +LLF  +  +H++V     DT+  LMSDALEWPTT +L+     D DD  +  + A +RRSLFWRR++YYISYGAL+ANRIPCPPRSGR YYTHN
Subjt:  LLPFTILLFLSSAGAHLSV-----DTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHN

Query:  CYKARGPVNPYTRGCSAITRCRR
        CY+ARGPV+PY+RGCSAITRCRR
Subjt:  CYKARGPVNPYTRGCSAITRCRR

SwissProt top hitse value%identityAlignment
Q0V822 Protein RALF-like 262.8e-0548.15Show/hide
Query:  RRVRYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR
        R+ R Y++ G L   R P PP    P+ +H  +K R PV+ Y+RGCS ITRCRR
Subjt:  RRVRYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR

Q8L9P8 Protein RALF-like 331.4e-0761.22Show/hide
Query:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR
        YISYGAL  N +PC  R G  YY  NC +     NPY+RGCSAITRCRR
Subjt:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR

Q9FHA6 Protein RALF-like 343.3e-3054.69Show/hide
Query:  LFLLLPFTILLFLS-SAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDS------TDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRP
        L LLL  ++L F+S      LS + SL L+ D  +WP    + H D  D  D ++S       D    RRSL+WRR +YYISYGAL+ANR+PCPPRSGR 
Subjt:  LFLLLPFTILLFLS-SAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDS------TDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRP

Query:  YYTHNCYKARGPVNPYTRGCSAITRCRR
        YYTHNC++ARGPV+PY+RGCS+ITRCRR
Subjt:  YYTHNCYKARGPVNPYTRGCSAITRCRR

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 15.5e-0433.07Show/hide
Query:  STILFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTT---TALFHDDAADS-DDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRP
        S  LFL L   ++  +SS          L      + W TT    +  H   A+    +++  D+   RR L   +   YISY +L  N +PC  R G  
Subjt:  STILFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTT---TALFHDDAADS-DDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRP

Query:  YYTHNCYKARGPVNPYTRGCSAITRCR
        YY  NC       NPY+RGCS I RCR
Subjt:  YYTHNCYKARGPVNPYTRGCSAITRCR

AT1G28270.1 ralf-like 42.4e-0742.7Show/hide
Query:  WPTTTALFHDDAADSDDD--DDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR
        +P T +  +      +DD  +   D+   RR L   R R YI Y AL  N +PC  R GR YY  +C K R   NPY RGCSAIT C R
Subjt:  WPTTTALFHDDAADSDDD--DDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR

AT2G33775.1 ralf-like 191.1e-0743.82Show/hide
Query:  WPTTTALFHDDAADSDDD--DDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR
        W  T +  +      +D   D   D+   RR L  R  R YISYGAL  N +PC  R GR YY  +C K R   NPY RGCS IT C R
Subjt:  WPTTTALFHDDAADSDDD--DDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR

AT3G25170.1 ralf-like 262.0e-0648.15Show/hide
Query:  RRVRYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR
        R+ R Y++ G L   R P PP    P+ +H  +K R PV+ Y+RGCS ITRCRR
Subjt:  RRVRYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR

AT5G67070.1 ralf-like 342.4e-3154.69Show/hide
Query:  LFLLLPFTILLFLS-SAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDS------TDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRP
        L LLL  ++L F+S      LS + SL L+ D  +WP    + H D  D  D ++S       D    RRSL+WRR +YYISYGAL+ANR+PCPPRSGR 
Subjt:  LFLLLPFTILLFLS-SAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDS------TDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRP

Query:  YYTHNCYKARGPVNPYTRGCSAITRCRR
        YYTHNC++ARGPV+PY+RGCS+ITRCRR
Subjt:  YYTHNCYKARGPVNPYTRGCSAITRCRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTCCACGATTCTCTTCCTCCTCCTCCCCTTCACGATCCTCCTCTTCCTCTCCTCCGCCGGCGCTCACCTCTCCGTTGACACCTCTCTCAAGCTCATGTCCGACGCCCT
CGAATGGCCCACCACAACCGCGCTCTTCCACGACGACGCCGCTGATTCCGACGACGACGACGACTCCACCGACGCCGCCGCCGCCCGCAGATCTCTCTTCTGGAGGCGCG
TCCGCTACTACATTTCCTACGGCGCCCTCGCCGCCAACCGAATCCCCTGCCCCCCGCGCTCCGGCCGCCCCTACTACACTCACAACTGCTACAAGGCCAGAGGCCCCGTC
AATCCCTACACGCGCGGCTGCTCCGCCATCACGCGCTGCCGCCGC
mRNA sequenceShow/hide mRNA sequence
CTCTCCACGATTCTCTTCCTCCTCCTCCCCTTCACGATCCTCCTCTTCCTCTCCTCCGCCGGCGCTCACCTCTCCGTTGACACCTCTCTCAAGCTCATGTCCGACGCCCT
CGAATGGCCCACCACAACCGCGCTCTTCCACGACGACGCCGCTGATTCCGACGACGACGACGACTCCACCGACGCCGCCGCCGCCCGCAGATCTCTCTTCTGGAGGCGCG
TCCGCTACTACATTTCCTACGGCGCCCTCGCCGCCAACCGAATCCCCTGCCCCCCGCGCTCCGGCCGCCCCTACTACACTCACAACTGCTACAAGGCCAGAGGCCCCGTC
AATCCCTACACGCGCGGCTGCTCCGCCATCACGCGCTGCCGCCGC
Protein sequenceShow/hide protein sequence
LSTILFLLLPFTILLFLSSAGAHLSVDTSLKLMSDALEWPTTTALFHDDAADSDDDDDSTDAAAARRSLFWRRVRYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPV
NPYTRGCSAITRCRR