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MS020418 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020418
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A1
Genome locationscaffold211:484411..484518
RNA-Seq ExpressionMS020418
SyntenyMS020418
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR001280 - Photosystem I PsaA/PsaB
IPR006243 - Photosystem I PsaA
IPR036408 - Photosystem I PsaA/PsaB superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM08600.1 Putative PSI P700 apoprotein A1 from chromosome 10 chloroplast insertion [Oryza sativa Japonica Group]8.1e-11100Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
ABB47305.1 Photosystem I P700 chlorophyll a apoprotein A1, putative [Oryza sativa Japonica Group]8.1e-11100Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
YP_009431390.1 photosystem I P700 apoprotein A1 [Anthericum ramosum]3.1e-1097.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
YP_009681135.1 photosystem I P700 apoprotein A1 [Sagittaria trifolia]3.1e-1097.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
YP_009992614.1 photosystem I P700 chlorophyll a apoprotein A1 [Oenothera curtiflora]3.1e-1097.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
TrEMBL top hitse value%identityAlignment
A0A218KG56 Photosystem I P700 chlorophyll a apoprotein A11.5e-1097.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
A0A218L7E5 Photosystem I P700 chlorophyll a apoprotein A11.5e-1097.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
A0A481XQM4 Photosystem I P700 chlorophyll a apoprotein A11.5e-1097.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Q339H2 Photosystem I P700 chlorophyll a apoprotein A13.9e-11100Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Q8S6F6 Photosystem I P700 chlorophyll a apoprotein A13.9e-11100Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
SwissProt top hitse value%identityAlignment
A1EA08 Photosystem I P700 chlorophyll a apoprotein A14.0e-1397.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
A4QJB5 Photosystem I P700 chlorophyll a apoprotein A14.0e-1397.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
A4QJJ9 Photosystem I P700 chlorophyll a apoprotein A14.0e-1397.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Q3V534 Photosystem I P700 chlorophyll a apoprotein A14.0e-1397.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Q70Y03 Photosystem I P700 chlorophyll a apoprotein A14.0e-1397.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Arabidopsis top hitse value%identityAlignment
ATCG00340.1 Photosystem I, PsaA/PsaB protein7.1e-0560Show/hide
Query:  SSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        +SLS +   FL  H VWA   MFL S RGYWQELI
Subjt:  SSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
ATCG00350.1 Photosystem I, PsaA/PsaB protein2.9e-1497.22Show/hide
Query:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI
        GSSLS YGLFFLGAHFVWAFSLMFLFSGRGYWQELI
Subjt:  GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTTCTTCATTATCTACATATGGCCTTTTTTTCCTAGGCGCTCATTTTGTATGGGCTTTTAGTTTAATGTTTCTATTCAGTGGACGTGGTTATTGGCAAGAACTTATT
mRNA sequenceShow/hide mRNA sequence
GGTTCTTCATTATCTACATATGGCCTTTTTTTCCTAGGCGCTCATTTTGTATGGGCTTTTAGTTTAATGTTTCTATTCAGTGGACGTGGTTATTGGCAAGAACTTATT
Protein sequenceShow/hide protein sequence
GSSLSTYGLFFLGAHFVWAFSLMFLFSGRGYWQELI