; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020439 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020439
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Genome locationscaffold375:8874..11371
RNA-Seq ExpressionMS020439
SyntenyMS020439
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019401 - Zinc finger, CHCC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148513.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica charantia]1.4e-52100Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH

XP_022943963.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata]2.5e-4992.23Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH

XP_022986645.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita maxima]1.5e-4993.2Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH

XP_023511819.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo]8.7e-5093.2Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH

XP_038900460.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida]1.1e-4992.23Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSSARNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGD+NPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH

TrEMBL top hitse value%identityAlignment
A0A0A0LNG2 zf-CHCC domain-containing protein1.1e-4789.32Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSS  PSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH

A0A1S3CI88 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial4.7e-4991.26Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSS  PSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1D4A8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial7.0e-53100Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1FXJ3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.2e-4992.23Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1JEL4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial7.2e-5093.2Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH

SwissProt top hitse value%identityAlignment
O75380 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial5.0e-0843.08Show/hide
Query:  QDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQDHH
        ++ ++   ++LI E P  +VE R+IAC+G    ALGHP  +I LD+E +   C YCGL++ Q HH
Subjt:  QDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQDHH

P52503 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.1e-0743.08Show/hide
Query:  QDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQDHH
        ++ ++   ++LI + P  +VE RIIAC+G    ALGHP  +I LD+E +   C YCGL++ Q HH
Subjt:  QDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQDHH

Q0MQH5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial5.0e-0843.08Show/hide
Query:  QDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQDHH
        ++ ++   ++LI E P  +VE R+IAC+G    ALGHP  +I LD+E +   C YCGL++ Q HH
Subjt:  QDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQDHH

Q0MQH7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial5.0e-0843.08Show/hide
Query:  QDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQDHH
        ++ ++   ++LI E P  +VE R+IAC+G    ALGHP  +I LD+E +   C YCGL++ Q HH
Subjt:  QDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQDHH

Q9M9M6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial5.5e-3969.37Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS L K +I S    PSS RN S+ + Q        +G HTAKWMQD SKKSPMELI+EVPPIKV+GRI+ACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH

Arabidopsis top hitse value%identityAlignment
AT3G03070.1 NADH-ubiquinone oxidoreductase-related3.9e-4069.37Show/hide
Query:  MASTLFKTIIESSSKFPSSARNLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS L K +I S    PSS RN S+ + Q        +G HTAKWMQD SKKSPMELI+EVPPIKV+GRI+ACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASTLFKTIIESSSKFPSSARNLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGACTCTGTTCAAAACGATTATCGAATCTTCCTCCAAATTTCCATCTTCGGCTAGAAATCTGAGTCTTGTGAGCAACCAAATCGGCCAGCACACCGCCAAATG
GATGCAGGATACAAGTAAGAAATCTCCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTCGAAGGCCGTATCATTGCTTGTGAGGGAGACAGCAATCCTGCCCTTG
GGCATCCAATCGAGTTCATATGCCTGGACCGGGAGGAGCCCGCCGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGATCATCACCAC
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGACTCTGTTCAAAACGATTATCGAATCTTCCTCCAAATTTCCATCTTCGGCTAGAAATCTGAGTCTTGTGAGCAACCAAATCGGCCAGCACACCGCCAAATG
GATGCAGGATACAAGTAAGAAATCTCCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTCGAAGGCCGTATCATTGCTTGTGAGGGAGACAGCAATCCTGCCCTTG
GGCATCCAATCGAGTTCATATGCCTGGACCGGGAGGAGCCCGCCGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGATCATCACCAC
Protein sequenceShow/hide protein sequence
MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH