; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020448 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020448
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationscaffold375:254469..256036
RNA-Seq ExpressionMS020448
SyntenyMS020448
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148092.1 binding partner of ACD11 1 [Cucumis sativus]2.2e-9984.34Show/hide
Query:  RTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPM--VSTPITENTG
        RTVRV NVSLSATEKDLRDFFSFSGEIEFVEMR D+ERSQ+AFVTFKDSKGAETSILLSGATIVDQPVSI+S PDYNLPA  A +P    VSTP  +NT 
Subjt:  RTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPM--VSTPITENTG

Query:  S---ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSA
        S   +T GSAM+KAEDVVSSMLAKGF+LGKDALNKAKSFDERHQLTSTAS KVASLDQKIGLSEKISVGTTVVNE+VR+MDEKFQVSEKTKAAVS AGSA
Subjt:  S---ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSA

Query:  IMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS
        IMTNRYV TGASWV++ FQRVAK AV+VSQKTKEKV+  EDQGK+VGNS
Subjt:  IMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS

XP_022148663.1 binding partner of ACD11 1-like isoform X1 [Momordica charantia]1.4e-122100Show/hide
Query:  MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG
        MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG
Subjt:  MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG

Query:  SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT
        SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT
Subjt:  SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT

Query:  NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ
        NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ
Subjt:  NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ

XP_022148664.1 binding partner of ACD11 1-like isoform X2 [Momordica charantia]1.4e-122100Show/hide
Query:  MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG
        MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG
Subjt:  MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG

Query:  SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT
        SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT
Subjt:  SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT

Query:  NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ
        NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ
Subjt:  NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ

XP_038900617.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]1.7e-9984.74Show/hide
Query:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPM--VSTPITENT
        +RTVRV NVSLS TEKDLRDFFSFSGEIEFVEMRKD+ERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI S PDYNLPA  A +P    VSTP T+NT
Subjt:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPM--VSTPITENT

Query:  --GSATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSA
          G++T GSAM+KAEDVVSSMLAKGF+LGKDALNKAKSFDERHQLTSTAS KVASLDQKIGLSEKISVGTTVVNE+VR+MDEKFQVSEKTKAAVS AGSA
Subjt:  --GSATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSA

Query:  IMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS
        IMTNRYV TGASWV++ FQRVAK AV+VSQKTKEK VL EDQGK+VGNS
Subjt:  IMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS

XP_038900618.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.7e-9984.74Show/hide
Query:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPM--VSTPITENT
        +RTVRV NVSLS TEKDLRDFFSFSGEIEFVEMRKD+ERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI S PDYNLPA  A +P    VSTP T+NT
Subjt:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPM--VSTPITENT

Query:  --GSATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSA
          G++T GSAM+KAEDVVSSMLAKGF+LGKDALNKAKSFDERHQLTSTAS KVASLDQKIGLSEKISVGTTVVNE+VR+MDEKFQVSEKTKAAVS AGSA
Subjt:  --GSATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSA

Query:  IMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS
        IMTNRYV TGASWV++ FQRVAK AV+VSQKTKEK VL EDQGK+VGNS
Subjt:  IMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein1.1e-9984.34Show/hide
Query:  RTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPM--VSTPITENTG
        RTVRV NVSLSATEKDLRDFFSFSGEIEFVEMR D+ERSQ+AFVTFKDSKGAETSILLSGATIVDQPVSI+S PDYNLPA  A +P    VSTP  +NT 
Subjt:  RTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPM--VSTPITENTG

Query:  S---ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSA
        S   +T GSAM+KAEDVVSSMLAKGF+LGKDALNKAKSFDERHQLTSTAS KVASLDQKIGLSEKISVGTTVVNE+VR+MDEKFQVSEKTKAAVS AGSA
Subjt:  S---ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSA

Query:  IMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS
        IMTNRYV TGASWV++ FQRVAK AV+VSQKTKEKV+  EDQGK+VGNS
Subjt:  IMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS

A0A5A7TN24 Binding partner of ACD11 1-like isoform X15.9e-9883.06Show/hide
Query:  RTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPM--VSTPITENTG
        RTVRV NVSLSATEKDLRDFFSFSGEIEFVEMR D+ERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI+S PDYNLPA  A +P    VSTP  +NT 
Subjt:  RTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPM--VSTPITENTG

Query:  SATT--GSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAI
        S TT  GSA++K EDVVSSMLAKGF+LGKDALNKAKSFDERHQLTSTAS KVASLDQKIGLSEKISVGTTVVNE+VR+MDEKFQVSEKTKAAVS AGSA+
Subjt:  SATT--GSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAI

Query:  MTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS
        M NRYV TGASWV++ FQRVAK AV+VSQKTKEKV+  EDQGK+VGNS
Subjt:  MTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS

A0A6J1D4M6 binding partner of ACD11 1-like isoform X26.9e-123100Show/hide
Query:  MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG
        MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG
Subjt:  MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG

Query:  SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT
        SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT
Subjt:  SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT

Query:  NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ
        NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ
Subjt:  NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ

A0A6J1D4Q0 binding partner of ACD11 1-like isoform X16.9e-123100Show/hide
Query:  MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG
        MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG
Subjt:  MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG

Query:  SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT
        SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT
Subjt:  SATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMT

Query:  NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ
        NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ
Subjt:  NRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNSQ

A0A6J1L7W4 binding partner of ACD11 1-like3.8e-9781.63Show/hide
Query:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGS
        VRTVRV NVSLSA+EKDLRDFFSFSGEIEFVEMRKD+ERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI + PDYNLPA  A +P  VS+P  EN GS
Subjt:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGS

Query:  ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMTN
         T GSAM+KAEDVVSSMLAKGF+LGKD LN+AKSFD++HQLTSTAS KV SLDQKIGLSEKISVGTTVVNE+V++MDEKFQVSEKTKAAV+ AG+A+M N
Subjt:  ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMTN

Query:  RYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS
        RYVSTGASWVT+ FQRVAK AVEVS KTKEK VLAEDQ K  G S
Subjt:  RYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKNVGNS

SwissProt top hitse value%identityAlignment
P87216 Protein vip15.1e-0625.71Show/hide
Query:  MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG
        M   V V N+S   TEK + DFFSF G++  +   K  E +Q A + F+     +T++LL  A +    + ITS+        AA +        T+  G
Subjt:  MVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTG

Query:  SATTGSAMEKAED---VVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSA
        +    +A ++ +    ++S +L++G+ L    L K+                   LDQ  G+S K           VR ++E++ V+EK     +    +
Subjt:  SATTGSAMEKAED---VVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSA

Query:  IMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKN
           NR     +S V+  F +  +TA   S    +KV  A + GKN
Subjt:  IMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGKN

Q9LFD5 Binding partner of ACD11 14.8e-5754.39Show/hide
Query:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGS
        VR+V+V N+S  ATE D+++FFSFSGE+E ++++ +      A+VTFK+++GAET++LLSGA+I DQ V I   P+Y+ PAA          P  E T S
Subjt:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGS

Query:  ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKA-------AVSTA
        +   S ++KAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNE+++ +D+ FQV+E+TK+        VS+A
Subjt:  ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKA-------AVSTA

Query:  GSAIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKV
        GSA+M NRYV TG SW    F RVA+ A EV QKTKEKV
Subjt:  GSAIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKV

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.1e-6759.35Show/hide
Query:  TVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNL-PAAAAKSPPMVSTPITENTGSA
        TV+V+NVSL AT++DL++FFSFSG+I ++E + ++ER+++A+VTFKD +GAET++LLSGATIVD  V ++  PDY L P A A   P  S     N    
Subjt:  TVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNL-PAAAAKSPPMVSTPITENTGSA

Query:  TTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAA-------VSTAG
           S + KAEDVVSSMLAKGF LGKDA+ KAKS DE+HQLTSTAS KVAS D+KIG ++KI+ GT VV E+VR++D+K+QVSEKTK+A       VS AG
Subjt:  TTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAA-------VSTAG

Query:  SAIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGK
        SAIM NRYV TGA+WVT  F +VAK A EV QK KEKV +AE++ K
Subjt:  SAIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQGK

AT5G16840.1 binding partner of acd11 13.4e-5854.39Show/hide
Query:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGS
        VR+V+V N+S  ATE D+++FFSFSGE+E ++++ +      A+VTFK+++GAET++LLSGA+I DQ V I   P+Y+ PAA          P  E T S
Subjt:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGS

Query:  ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKA-------AVSTA
        +   S ++KAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNE+++ +D+ FQV+E+TK+        VS+A
Subjt:  ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKA-------AVSTA

Query:  GSAIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKV
        GSA+M NRYV TG SW    F RVA+ A EV QKTKEKV
Subjt:  GSAIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKV

AT5G16840.2 binding partner of acd11 12.4e-5955.23Show/hide
Query:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGS
        VR+V+V N+S  ATE D+++FFSFSGE+E ++++  +E S  A+VTFK+++GAET++LLSGA+I DQ V I   P+Y+ PAA          P  E T S
Subjt:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGS

Query:  ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKA-------AVSTA
        +   S ++KAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNE+++ +D+ FQV+E+TK+        VS+A
Subjt:  ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKA-------AVSTA

Query:  GSAIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKV
        GSA+M NRYV TG SW    F RVA+ A EV QKTKEKV
Subjt:  GSAIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKV

AT5G16840.3 binding partner of acd11 13.4e-5854.39Show/hide
Query:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGS
        VR+V+V N+S  ATE D+++FFSFSGE+E ++++ +      A+VTFK+++GAET++LLSGA+I DQ V I   P+Y+ PAA          P  E T S
Subjt:  VRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGS

Query:  ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKA-------AVSTA
        +   S ++KAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNE+++ +D+ FQV+E+TK+        VS+A
Subjt:  ATTGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKA-------AVSTA

Query:  GSAIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKV
        GSA+M NRYV TG SW    F RVA+ A EV QKTKEKV
Subjt:  GSAIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKV

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.9e-6656.38Show/hide
Query:  TVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGSAT
        TV+V+NVSL ATE+DL++FFSFSG+I ++E + +++ S++A+VTFKD +GAET++LL+G+TIVD  V++T  PDY LP  A  S   +      ++ +  
Subjt:  TVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGSAT

Query:  TGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAA-------VSTAGS
          S   KAEDVVS M++KGF LGKDA+ KAKS DE+HQLTSTAS +V S D++IG +EKI+ GTTVV+E+V+++D+KFQV+EKTK+A       VS AGS
Subjt:  TGSAMEKAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAA-------VSTAGS

Query:  AIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQ
        AIM NRYV TGA+WVT  F RV+K A EV QK KEKV LAE++
Subjt:  AIMTNRYVSTGASWVTEVFQRVAKTAVEVSQKTKEKVVLAEDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGATGGTCAGAACGGTGAGAGTTGCCAATGTCTCCTTAAGCGCGACGGAGAAAGATTTGAGAGACTTTTTTTCTTTCTCCGGTGAGATTGAATTTGTCGAAATGCGAAA
GGACAGCGAGCGATCTCAAGTTGCATTTGTTACCTTTAAGGATTCGAAAGGGGCAGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAGCCTGTTAGCATCA
CTTCTGATCCGGATTACAACCTACCTGCTGCTGCTGCCAAATCCCCTCCAATGGTGTCTACTCCTATTACAGAGAACACAGGCTCTGCTACTACTGGATCTGCAATGGAA
AAGGCAGAAGATGTAGTTAGCAGCATGCTTGCCAAAGGCTTCAGTTTGGGCAAAGATGCCCTCAATAAGGCAAAGTCTTTTGACGAGAGGCACCAGTTGACATCGACAGC
CTCATTCAAAGTGGCTTCTCTGGACCAAAAAATCGGTCTTAGCGAGAAAATTAGCGTTGGCACAACAGTGGTGAATGAGCAAGTGAGAAAAATGGATGAGAAGTTTCAAG
TGTCTGAGAAGACCAAGGCAGCCGTGAGCACTGCAGGATCAGCGATAATGACTAACCGCTATGTCTCAACTGGGGCTTCCTGGGTCACCGAGGTGTTCCAAAGAGTCGCC
AAGACAGCTGTAGAAGTTAGCCAGAAAACAAAGGAGAAGGTCGTTTTAGCTGAGGATCAAGGGAAAAATGTGGGAAATTCTCAA
mRNA sequenceShow/hide mRNA sequence
CAGATGGTCAGAACGGTGAGAGTTGCCAATGTCTCCTTAAGCGCGACGGAGAAAGATTTGAGAGACTTTTTTTCTTTCTCCGGTGAGATTGAATTTGTCGAAATGCGAAA
GGACAGCGAGCGATCTCAAGTTGCATTTGTTACCTTTAAGGATTCGAAAGGGGCAGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAGCCTGTTAGCATCA
CTTCTGATCCGGATTACAACCTACCTGCTGCTGCTGCCAAATCCCCTCCAATGGTGTCTACTCCTATTACAGAGAACACAGGCTCTGCTACTACTGGATCTGCAATGGAA
AAGGCAGAAGATGTAGTTAGCAGCATGCTTGCCAAAGGCTTCAGTTTGGGCAAAGATGCCCTCAATAAGGCAAAGTCTTTTGACGAGAGGCACCAGTTGACATCGACAGC
CTCATTCAAAGTGGCTTCTCTGGACCAAAAAATCGGTCTTAGCGAGAAAATTAGCGTTGGCACAACAGTGGTGAATGAGCAAGTGAGAAAAATGGATGAGAAGTTTCAAG
TGTCTGAGAAGACCAAGGCAGCCGTGAGCACTGCAGGATCAGCGATAATGACTAACCGCTATGTCTCAACTGGGGCTTCCTGGGTCACCGAGGTGTTCCAAAGAGTCGCC
AAGACAGCTGTAGAAGTTAGCCAGAAAACAAAGGAGAAGGTCGTTTTAGCTGAGGATCAAGGGAAAAATGTGGGAAATTCTCAA
Protein sequenceShow/hide protein sequence
QMVRTVRVANVSLSATEKDLRDFFSFSGEIEFVEMRKDSERSQVAFVTFKDSKGAETSILLSGATIVDQPVSITSDPDYNLPAAAAKSPPMVSTPITENTGSATTGSAME
KAEDVVSSMLAKGFSLGKDALNKAKSFDERHQLTSTASFKVASLDQKIGLSEKISVGTTVVNEQVRKMDEKFQVSEKTKAAVSTAGSAIMTNRYVSTGASWVTEVFQRVA
KTAVEVSQKTKEKVVLAEDQGKNVGNSQ