CuGenDBv2

Gene ID	MS020469
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NERD domain-containing protein
Genome location	scaffold375:416048..420912
RNA-Seq Expression	MS020469
Synteny	MS020469
Gene Ontology terms	NA
InterPro domains	IPR011528 - Nuclease-related domain, NERD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148081.1 uncharacterized protein LOC101217532 [Cucumis sativus]

4.3e-156

86.96

Show/hide

Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW AI+GGLIVYG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY G AY+GLRIPDADTGSRQNIDLVVV +EE+LVISVKNL GFVSINSDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLP+PVEETKQLIP+LESYLEQRGV LPAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKE QEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ
        QKLKAILGTAPMWDKLELKGKY+LGDFLEF+GK+EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S S+W+EV VRSSTEILFQ
Subjt:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ

Query:  PQNSTKTRKFKLSSVISLTLSA
        PQNSTK RKFKLSSVISLTLSA
Subjt:  PQNSTKTRKFKLSSVISLTLSA

XP_008459170.1 PREDICTED: uncharacterized protein LOC103498367 [Cucumis melo]

1.8e-157

87.58

Show/hide

Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW AI+GGL+VYG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY GKAY+GLRIPDADTGSRQNIDLVVV +EE+LVISVKNL GFVSINSDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPVLESYLEQRGV +PAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKELQEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ
        QKLKAILGTAPMWDKLELKGKY+LGDFLEF+GK+EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S+S+W+EV VRSSTEILFQ
Subjt:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ

Query:  PQNSTKTRKFKLSSVISLTLSA
        PQNSTK RKFKLSSVISLTLSA
Subjt:  PQNSTKTRKFKLSSVISLTLSA

XP_022148662.1 uncharacterized protein LOC111017264 [Momordica charantia]

7.6e-177

99.06

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Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW  ILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ
        DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ
Subjt:  DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ

Query:  KLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNVRSSTEILFQPQN
        KLKAIL TAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNVRSSTEILFQPQN
Subjt:  KLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNVRSSTEILFQPQN

Query:  STKTRKFKLSSVISLTLSA
        STKTRKFKLSSVISLTLSA
Subjt:  STKTRKFKLSSVISLTLSA

XP_022943551.1 uncharacterized protein LOC111448288 [Cucurbita moschata]

4.8e-155

86.34

Show/hide

Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW AI+GGLIVY +F+LFFSG+DD+MEVETSDFNAIFAVA+RFEKLY GKAYIGLRIPDADTGSR+NIDLVVV +EE+L+ISVKNL GFVSINSDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPVLESYLEQRGV LP GYLSCKVVLPNPKFRTIDSG+FP EV TYDQWMQLKP H  SFSGWMKGAFRGKKELQ+EPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ
        QKLKAILGTAPMWDKLELKGKY+LG+FLEFKGK+EDV+DLR+IKRSK+S +TIQKTSMLGFAPTRLQVLY  RDYRSGG   TS+WKEV VRSSTEILFQ
Subjt:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ

Query:  PQNSTKTRKFKLSSVISLTLSA
        PQNS+K RKFKLSSVISLTLSA
Subjt:  PQNSTKTRKFKLSSVISLTLSA

XP_038901981.1 uncharacterized protein LOC120088636 [Benincasa hispida]

1.1e-156

86.96

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Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW AI GGLI+YG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY GKAY+GLRIPDADTGSRQNIDLVV+ +EE+LVI+VKNL GFVSINSDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPV+ESY+EQRGV LPAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKELQEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ
        QKLKAILGTAPMWDKLELKGKY+LGDFLEFKGK EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S S+W+EV VRSSTEILFQ
Subjt:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ

Query:  PQNSTKTRKFKLSSVISLTLSA
        PQNSTK RKFKLSSVISLTLSA
Subjt:  PQNSTKTRKFKLSSVISLTLSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTU6 NERD domain-containing protein

2.1e-156

86.96

Show/hide

Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW AI+GGLIVYG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY G AY+GLRIPDADTGSRQNIDLVVV +EE+LVISVKNL GFVSINSDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLP+PVEETKQLIP+LESYLEQRGV LPAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKE QEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ
        QKLKAILGTAPMWDKLELKGKY+LGDFLEF+GK+EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S S+W+EV VRSSTEILFQ
Subjt:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ

Query:  PQNSTKTRKFKLSSVISLTLSA
        PQNSTK RKFKLSSVISLTLSA
Subjt:  PQNSTKTRKFKLSSVISLTLSA

A0A1S3CA35 uncharacterized protein LOC103498367

8.5e-158

87.58

Show/hide

Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW AI+GGL+VYG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY GKAY+GLRIPDADTGSRQNIDLVVV +EE+LVISVKNL GFVSINSDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPVLESYLEQRGV +PAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKELQEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ
        QKLKAILGTAPMWDKLELKGKY+LGDFLEF+GK+EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S+S+W+EV VRSSTEILFQ
Subjt:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ

Query:  PQNSTKTRKFKLSSVISLTLSA
        PQNSTK RKFKLSSVISLTLSA
Subjt:  PQNSTKTRKFKLSSVISLTLSA

A0A5A7SRC0 Plasma membrane isoform 1

8.5e-158

87.58

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Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW AI+GGL+VYG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY GKAY+GLRIPDADTGSRQNIDLVVV +EE+LVISVKNL GFVSINSDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPVLESYLEQRGV +PAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKELQEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ
        QKLKAILGTAPMWDKLELKGKY+LGDFLEF+GK+EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S+S+W+EV VRSSTEILFQ
Subjt:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ

Query:  PQNSTKTRKFKLSSVISLTLSA
        PQNSTK RKFKLSSVISLTLSA
Subjt:  PQNSTKTRKFKLSSVISLTLSA

A0A6J1D5P0 uncharacterized protein LOC111017264

3.7e-177

99.06

Show/hide

Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW  ILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ
        DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ
Subjt:  DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ

Query:  KLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNVRSSTEILFQPQN
        KLKAIL TAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNVRSSTEILFQPQN
Subjt:  KLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNVRSSTEILFQPQN

Query:  STKTRKFKLSSVISLTLSA
        STKTRKFKLSSVISLTLSA
Subjt:  STKTRKFKLSSVISLTLSA

A0A6J1FS11 uncharacterized protein LOC111448288

2.3e-155

86.34

Show/hide

Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW AI+GGLIVY +F+LFFSG+DD+MEVETSDFNAIFAVA+RFEKLY GKAYIGLRIPDADTGSR+NIDLVVV +EE+L+ISVKNL GFVSINSDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPVLESYLEQRGV LP GYLSCKVVLPNPKFRTIDSG+FP EV TYDQWMQLKP H  SFSGWMKGAFRGKKELQ+EPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ
        QKLKAILGTAPMWDKLELKGKY+LG+FLEFKGK+EDV+DLR+IKRSK+S +TIQKTSMLGFAPTRLQVLY  RDYRSGG   TS+WKEV VRSSTEILFQ
Subjt:  QKLKAILGTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNVRSSTEILFQ

Query:  PQNSTKTRKFKLSSVISLTLSA
        PQNS+K RKFKLSSVISLTLSA
Subjt:  PQNSTKTRKFKLSSVISLTLSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G65020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

1.8e-107

62.85

Show/hide

Query:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW  I+ GL++Y + R FF  +D+  +VETSD  A+F+VA R EKLY GKAY+GLRIPDADT SRQ+ID+V+V + +V+VISVKNL G V++ SDGSWVC
Subjt:  MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG--HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPL
        + G  H T+T PDP+ E K+   VLESYLEQRGV L  G +SCKVV+PNP FRTI +  FPSEVITY+ W QLKP  K   SGW+KGAF   KE+QE   
Subjt:  DDG--HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPL

Query:  NQKLKAILGTAPMWDKLELK-GKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGST-SDWKEVNVRSSTEILF
        +QKL  ILGTAP WD++ELK  K VLG+FLEFKGK ED   LR IKRSKV +++IQKTSM G AP+RLQVLY+ RDYRS GS+ ++ KEV VRSSTE+LF
Subjt:  NQKLKAILGTAPMWDKLELK-GKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGST-SDWKEVNVRSSTEILF

Query:  QPQNSTKTRKFKLSSVISLTLSA
        QP++STK +KFKLSS++S++LSA
Subjt:  QPQNSTKTRKFKLSSVISLTLSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGGCTGCAATTCTTGGTGGACTCATCGTTTATGGCATCTTCAGGCTCTTCTTCTCCGGCGAAGACGATATTATGGAGGTCGAGACCTCCGATTTCAATGCTATTTT
CGCCGTCGCTAGTAGGTTTGAGAAGCTCTACAGTGGAAAGGCTTACATCGGGCTTCGGATTCCTGATGCCGACACCGGTTCCCGGCAGAATATTGATCTCGTAGTTGTTA
ATGAAGAGGAGGTATTGGTGATATCTGTCAAGAACTTAAAAGGATTTGTCTCCATCAATTCGGATGGTTCCTGGGTTTGTGACGACGGACACAAGACAAAGACTCTTCCT
GATCCTGTTGAAGAGACCAAACAATTGATACCTGTTCTTGAGTCTTACCTTGAACAAAGAGGAGTGGGTCTTCCAGCGGGGTATTTGTCATGCAAAGTTGTACTTCCAAA
TCCAAAATTCCGCACAATTGACTCGGGCATATTTCCTTCTGAGGTTATTACCTATGACCAGTGGATGCAGCTGAAACCGGAACACAAAGGTTCCTTTTCTGGGTGGATGA
AAGGTGCATTTCGTGGAAAGAAAGAGTTGCAGGAAGAACCTCTGAATCAGAAGCTTAAAGCTATCCTTGGCACCGCACCGATGTGGGATAAATTGGAGCTCAAAGGGAAA
TATGTATTAGGAGACTTTCTGGAATTCAAGGGTAAGGACGAAGATGTGGAGGATTTGAGAGAGATCAAACGATCAAAAGTTAGTCAGATGACTATTCAGAAGACTAGCAT
GCTTGGATTTGCTCCTACAAGGCTTCAAGTACTGTATGCTTCCCGCGATTATCGAAGTGGGGGCTCAACATCAGATTGGAAGGAAGTGAATGTAAGATCAAGCACAGAGA
TTTTATTTCAACCTCAGAATTCCACAAAAACTCGTAAGTTCAAACTCTCTTCAGTTATCTCCTTGACACTCAGTGCA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MWAAILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVCDDGHKTKTLP
DPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQKLKAILGTAPMWDKLELKGK
YVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNVRSSTEILFQPQNSTKTRKFKLSSVISLTLSA

MS020469 (gene) of Bitter gourd (TR) v1 genome