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MS020487 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020487
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhytocyanin domain-containing protein
Genome locationscaffold375:572599..573042
RNA-Seq ExpressionMS020487
SyntenyMS020487
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR003245 - Phytocyanin domain
IPR008972 - Cupredoxin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459215.1 PREDICTED: extensin, partial [Cucumis melo]4.2e-4875.21Show/hide
Query:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
        PRKIIVGGS  W LGFDY++WALKNGPF++NDILVFKYDPP  +T PHSVYLL NM+SF+NCDL +A  LAN  QG+GDGF+FVLK Q  YYFACGEGNG
Subjt:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG

Query:  FHCKNGSMKFSVTPILQ
        FHCK GSMKF++TPIL+
Subjt:  FHCKNGSMKFSVTPILQ

XP_011649199.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]3.5e-4772.88Show/hide
Query:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
        PRKIIVGGS  W LGFDY++WALKNGPF++NDILVFKYDPP  +T PH+VYLL NM+S +NCD  +A  LAN TQG+GDGF+FVLK Q  YYFACGEGNG
Subjt:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG

Query:  FHCKNGSMKFSVTPILQS
        FHCK GSMKF++TPIL++
Subjt:  FHCKNGSMKFSVTPILQS

XP_022148560.1 uncharacterized protein LOC111017194 [Momordica charantia]9.3e-4874.78Show/hide
Query:  RKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNGF
        +KI+VGGSENW  GFDY+NWALKNGPF++ND LVFKYDPP   T PHSVYLL N+ SFS CDLR A K+ANWTQG GDGF+FVL+Q K YYFACGE NGF
Subjt:  RKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNGF

Query:  HCKNGSMKFSVTPIL
        HCK G+MKFS+TP L
Subjt:  HCKNGSMKFSVTPIL

XP_022148634.1 leucine-rich repeat extensin-like protein 3 [Momordica charantia]4.5e-66100Show/hide
Query:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
        PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
Subjt:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG

Query:  FHCKNGSMKFSVTPILQS
        FHCKNGSMKFSVTPILQS
Subjt:  FHCKNGSMKFSVTPILQS

XP_022947109.1 extensin-like isoform X4 [Cucurbita moschata]1.8e-4674.56Show/hide
Query:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
        PRKIIVGGS+ W LGFDY++W LKNGPF++NDILVFKYDPP  +T PH+VYLL NMQS + CD RRA  +AN TQG+G+GF FVLKQQK YYFACGEGNG
Subjt:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG

Query:  FHCKNGSMKFSVTP
        FHC  GSMKFS+TP
Subjt:  FHCKNGSMKFSVTP

TrEMBL top hitse value%identityAlignment
A0A0A0LIT9 Phytocyanin domain-containing protein1.7e-4772.88Show/hide
Query:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
        PRKIIVGGS  W LGFDY++WALKNGPF++NDILVFKYDPP  +T PH+VYLL NM+S +NCD  +A  LAN TQG+GDGF+FVLK Q  YYFACGEGNG
Subjt:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG

Query:  FHCKNGSMKFSVTPILQS
        FHCK GSMKF++TPIL++
Subjt:  FHCKNGSMKFSVTPILQS

A0A1S3CAV5 extensin2.0e-4875.21Show/hide
Query:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
        PRKIIVGGS  W LGFDY++WALKNGPF++NDILVFKYDPP  +T PHSVYLL NM+SF+NCDL +A  LAN  QG+GDGF+FVLK Q  YYFACGEGNG
Subjt:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG

Query:  FHCKNGSMKFSVTPILQ
        FHCK GSMKF++TPIL+
Subjt:  FHCKNGSMKFSVTPILQ

A0A6J1D388 uncharacterized protein LOC1110171944.5e-4874.78Show/hide
Query:  RKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNGF
        +KI+VGGSENW  GFDY+NWALKNGPF++ND LVFKYDPP   T PHSVYLL N+ SFS CDLR A K+ANWTQG GDGF+FVL+Q K YYFACGE NGF
Subjt:  RKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNGF

Query:  HCKNGSMKFSVTPIL
        HCK G+MKFS+TP L
Subjt:  HCKNGSMKFSVTPIL

A0A6J1D4K0 leucine-rich repeat extensin-like protein 32.2e-66100Show/hide
Query:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
        PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
Subjt:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG

Query:  FHCKNGSMKFSVTPILQS
        FHCKNGSMKFSVTPILQS
Subjt:  FHCKNGSMKFSVTPILQS

A0A6J1G5T9 extensin-like isoform X48.5e-4774.56Show/hide
Query:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
        PRKIIVGGS+ W LGFDY++W LKNGPF++NDILVFKYDPP  +T PH+VYLL NMQS + CD RRA  +AN TQG+G+GF FVLKQQK YYFACGEGNG
Subjt:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG

Query:  FHCKNGSMKFSVTP
        FHC  GSMKFS+TP
Subjt:  FHCKNGSMKFSVTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15770.1 Cupredoxin superfamily protein9.4e-3046.55Show/hide
Query:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
        P+KIIVGGS+ W  G DY +WA KN PF++ND+LVFKYD    A   ++VYL  +  S+ NCD++ A K+ +  +G+ + F F LK+ + Y+FA GE +G
Subjt:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG

Query:  FHCKNGSMKFSVTPIL
         +C+N +MKF++ P+L
Subjt:  FHCKNGSMKFSVTPIL

AT2G15780.1 Cupredoxin superfamily protein1.2e-3758.62Show/hide
Query:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG
        PRKIIVGG + W  GF+Y++WA K  PFFLNDILVFKY+PP  A   HSVYLL N  S+  CD+++   +A+  QG G GF+FVLKQ K YY +CGE +G
Subjt:  PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNG

Query:  FHCKNGSMKFSVTPIL
         HC NG+MKF+V P+L
Subjt:  FHCKNGSMKFSVTPIL

AT4G33930.1 Cupredoxin superfamily protein1.4e-1741.07Show/hide
Query:  WHLGFDYSNWALKNGPFFLNDILVFKY--DPPTGATVPH------SVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNGFHC
        W  G+ Y+ W  K+ PF+++D+LVFKY  D  T +   H       VYLL +M+SF  C++ R  KL      +  GF+ +L++ +TYYFA G+ N   C
Subjt:  WHLGFDYSNWALKNGPFFLNDILVFKY--DPPTGATVPH------SVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNGFHC

Query:  KNGSMKFSVTPI
         N +MKFSV PI
Subjt:  KNGSMKFSVTPI

AT4G34300.1 Cupredoxin superfamily protein3.5e-1639.82Show/hide
Query:  WHLGFDYSNWALKNGPFFLNDILVFKY---DPPTGATVPH------SVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNGFH
        W  G+ Y+ W  K+ PF++ND+LVF Y   D     T  H       VYLL +M+SF  C++ R  KL      +  GF+ +L++  TYYF  G+ N   
Subjt:  WHLGFDYSNWALKNGPFFLNDILVFKY---DPPTGATVPH------SVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNGFH

Query:  CKNGSMKFSVTPI
        C N +MKFSV PI
Subjt:  CKNGSMKFSVTPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTAGAAAGATCATAGTGGGTGGCTCGGAGAATTGGCATCTTGGCTTCGACTACAGCAACTGGGCCCTTAAAAACGGTCCATTTTTTCTCAACGACATTCTAGTGTTCAA
GTATGATCCTCCAACGGGCGCAACAGTTCCCCACAGTGTGTACTTGCTATCAAACATGCAAAGCTTCTCAAACTGTGATCTGAGAAGGGCCACAAAGCTTGCAAATTGGA
CACAAGGAAATGGCGATGGCTTCCAATTTGTGCTCAAACAACAAAAAACTTACTACTTTGCCTGTGGAGAAGGCAATGGCTTCCATTGCAAAAATGGATCCATGAAGTTC
TCTGTCACACCAATACTTCAGAGT
mRNA sequenceShow/hide mRNA sequence
CCTAGAAAGATCATAGTGGGTGGCTCGGAGAATTGGCATCTTGGCTTCGACTACAGCAACTGGGCCCTTAAAAACGGTCCATTTTTTCTCAACGACATTCTAGTGTTCAA
GTATGATCCTCCAACGGGCGCAACAGTTCCCCACAGTGTGTACTTGCTATCAAACATGCAAAGCTTCTCAAACTGTGATCTGAGAAGGGCCACAAAGCTTGCAAATTGGA
CACAAGGAAATGGCGATGGCTTCCAATTTGTGCTCAAACAACAAAAAACTTACTACTTTGCCTGTGGAGAAGGCAATGGCTTCCATTGCAAAAATGGATCCATGAAGTTC
TCTGTCACACCAATACTTCAGAGT
Protein sequenceShow/hide protein sequence
PRKIIVGGSENWHLGFDYSNWALKNGPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQQKTYYFACGEGNGFHCKNGSMKF
SVTPILQS