CuGenDBv2

Gene ID	MS020497
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CCG-binding protein 1
Genome location	scaffold375:671166..672071
RNA-Seq Expression	MS020497
Synteny	MS020497
Gene Ontology terms	GO:0010183 - pollen tube guidance (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0036033 - mediator complex binding (molecular function)
InterPro domains	IPR037502 - CCG-binding protein 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022148538.1 CCG-binding protein 1 [Momordica charantia]

4.9e-101

84.55

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Query:  MESFILRSISSPFLLEATDLRRTGSASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLEVSFCG
        MESFILRSISSPFLLEATDLRRTGSASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL      
Subjt:  MESFILRSISSPFLLEATDLRRTGSASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLEVSFCG

Query:  SSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAEEMEEE
                                    E+ SPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAEEMEEE
Subjt:  SSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAEEMEEE

Query:  ERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        ERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
Subjt:  ERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

XP_022943281.1 CCG-binding protein 1 [Cucurbita moschata]

7.4e-81

70.71

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Query:  MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL
        MES +LRS SSP LLE+TD LRR GS S     S+ VRCSSRSHA IPKLEPFSRTKLDRAIK+PPL+EKSE+ELADYCSTL+GDDSYSCWKAYFELKDL
Subjt:  MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL

Query:  EVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSA
                                          E+ SPKQEVEKLILQAGGVKSLIG LHGIA IHKRK SEN A KPLN  E R   CPIPDGLPKSA
Subjt:  EVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSA

Query:  EEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        EE+EEEE ARMPDSPFTRLLRSKGTFPAWY+PAPDHETD
Subjt:  EEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

XP_022986608.1 CCG-binding protein 1 [Cucurbita maxima]

1.1e-81

70.71

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Query:  MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL
        MES  LRS+SSP LLE+TD LRR GSAS     S+ VRCSSRSHA IPKL+PFSRTKLDRAIK+PPL+EKSE+ELADYCSTL+GDDSYSCWKAYFELKDL
Subjt:  MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL

Query:  EVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSA
                                          E+ SPKQEVEKLILQAGGVKSLIG LHGIA IHK+K SEN A KPLNG E R   CPIPDGLPKSA
Subjt:  EVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSA

Query:  EEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        EE+EEEE ARMPDSPFTRLLRSKGTFPAWY+PAPDHETD
Subjt:  EEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

XP_023512041.1 CCG-binding protein 1 [Cucurbita pepo subsp. pepo]

3.0e-82

71.13

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Query:  MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL
        MES +LRS+SSP LLE+TD LRR GS S     S+ VRCSSRSHA IPKLEPFSRTKLDRAIK+PPL+EKSE+ELADYCSTL+GDDSYSCWKAYFELKDL
Subjt:  MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL

Query:  EVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSA
                                          E+ SPKQEVEKLILQAGGVKSLIG LHGIA IHKRK SEN A KPLNG E R   CPIPDGLPKSA
Subjt:  EVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSA

Query:  EEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        EE+EEEE ARMPDSPFTRLLRSKGTFPAWY+PAPDHETD
Subjt:  EEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

XP_038877912.1 CCG-binding protein 1 [Benincasa hispida]

1.3e-80

69.17

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Query:  MESFILRSISSPFLLEATD--LRRTGSA-----SSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKD
        MES +LRS+SSP LL+ TD  LRR G +     SS+ VRCSS++HAYIPKLEPFSRTKLDRAIKEPPLIEKSE+ELADYCSTLEGDDSYSCWKAYFELKD
Subjt:  MESFILRSISSPFLLEATD--LRRTGSA-----SSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKD

Query:  LEVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKS
        L                                  E+ SPKQEVEKLILQAGGVKSLIGCLHGI AI KRKG E    KP  G EGR   CPIPDGLPKS
Subjt:  LEVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKS

Query:  AEEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        AEE+EEEE  RMPDSPFTRLLRSKG FPAWYSPAPDHETD
Subjt:  AEEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C971 CCG-binding protein 1

2.5e-74

67.08

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Query:  MESFILRSISSPFLLEATD--LRRTGSASSS------AVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELK
        MES +LRS+SSP LLE+TD  LRR GS  SS       VR SS+SH+YIPKLEPFSR+KLDRAIKEPPLIEKSE+ELADYCSTLEGDDSYSCWKAYFELK
Subjt:  MESFILRSISSPFLLEATD--LRRTGSASSS------AVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELK

Query:  DLEVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKP-LNGAEGR-ETGCPIPDGL
        DL                                  E+ +PKQEVEKLILQAGGVKSLIGCLHGI AI K KG E    K    G EGR    CPIPDGL
Subjt:  DLEVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKP-LNGAEGR-ETGCPIPDGL

Query:  PKSAEEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        PKSAEE+EEEE  RMPDS FTRLLRSKGTFPAWYSPAPDHETD
Subjt:  PKSAEEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

A0A5A7TT03 CCG-binding protein 1

2.5e-74

67.08

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Query:  MESFILRSISSPFLLEATD--LRRTGSASSS------AVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELK
        MES +LRS+SSP LLE+TD  LRR GS  SS       VR SS+SH+YIPKLEPFSR+KLDRAIKEPPLIEKSE+ELADYCSTLEGDDSYSCWKAYFELK
Subjt:  MESFILRSISSPFLLEATD--LRRTGSASSS------AVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELK

Query:  DLEVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKP-LNGAEGR-ETGCPIPDGL
        DL                                  E+ +PKQEVEKLILQAGGVKSLIGCLHGI AI K KG E    K    G EGR    CPIPDGL
Subjt:  DLEVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKP-LNGAEGR-ETGCPIPDGL

Query:  PKSAEEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        PKSAEE+EEEE  RMPDS FTRLLRSKGTFPAWYSPAPDHETD
Subjt:  PKSAEEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

A0A6J1D4D3 CCG-binding protein 1

2.4e-101

84.55

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Query:  MESFILRSISSPFLLEATDLRRTGSASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLEVSFCG
        MESFILRSISSPFLLEATDLRRTGSASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL      
Subjt:  MESFILRSISSPFLLEATDLRRTGSASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLEVSFCG

Query:  SSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAEEMEEE
                                    E+ SPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAEEMEEE
Subjt:  SSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAEEMEEE

Query:  ERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        ERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
Subjt:  ERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

A0A6J1FRB4 CCG-binding protein 1

3.6e-81

70.71

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Query:  MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL
        MES +LRS SSP LLE+TD LRR GS S     S+ VRCSSRSHA IPKLEPFSRTKLDRAIK+PPL+EKSE+ELADYCSTL+GDDSYSCWKAYFELKDL
Subjt:  MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL

Query:  EVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSA
                                          E+ SPKQEVEKLILQAGGVKSLIG LHGIA IHKRK SEN A KPLN  E R   CPIPDGLPKSA
Subjt:  EVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSA

Query:  EEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        EE+EEEE ARMPDSPFTRLLRSKGTFPAWY+PAPDHETD
Subjt:  EEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

A0A6J1JH09 CCG-binding protein 1

5.5e-82

70.71

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Query:  MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL
        MES  LRS+SSP LLE+TD LRR GSAS     S+ VRCSSRSHA IPKL+PFSRTKLDRAIK+PPL+EKSE+ELADYCSTL+GDDSYSCWKAYFELKDL
Subjt:  MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDL

Query:  EVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSA
                                          E+ SPKQEVEKLILQAGGVKSLIG LHGIA IHK+K SEN A KPLNG E R   CPIPDGLPKSA
Subjt:  EVSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSA

Query:  EEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        EE+EEEE ARMPDSPFTRLLRSKGTFPAWY+PAPDHETD
Subjt:  EEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

SwissProt top hits

e value

%identity

Alignment

Q9XIM0 CCG-binding protein 1

2.0e-52

Show/hide

Query:  MESFILRSISSPFLLEATDLRRTG-----SASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLE
        ++S  LRS   P  +E  D +        + S   VRCSS     +PKLE FSR K DR +++PPLIEK+ESEL+DYCSTLEGDDSYSCW+AYFELKDL 
Subjt:  MESFILRSISSPFLLEATDLRRTG-----SASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLE

Query:  VSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSEN--NAAKPLNGAEGRETGCPIPDGLPKS
                                         ER  PK EVE LILQ GG+KSLIGCLHG+A++ K   ++N  +  +  +  +G      IPDGLPKS
Subjt:  VSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSEN--NAAKPLNGAEGRETGCPIPDGLPKS

Query:  AEEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
         +E+EEEE+++MPDS FTRLLRSKGT PAW+S APDHETD
Subjt:  AEEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

Arabidopsis top hits

e value

%identity

Alignment

AT2G15890.1 maternal effect embryo arrest 14

1.4e-53

Show/hide

Query:  MESFILRSISSPFLLEATDLRRTG-----SASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLE
        ++S  LRS   P  +E  D +        + S   VRCSS     +PKLE FSR K DR +++PPLIEK+ESEL+DYCSTLEGDDSYSCW+AYFELKDL 
Subjt:  MESFILRSISSPFLLEATDLRRTG-----SASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLE

Query:  VSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSEN--NAAKPLNGAEGRETGCPIPDGLPKS
                                         ER  PK EVE LILQ GG+KSLIGCLHG+A++ K   ++N  +  +  +  +G      IPDGLPKS
Subjt:  VSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSEN--NAAKPLNGAEGRETGCPIPDGLPKS

Query:  AEEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
         +E+EEEE+++MPDS FTRLLRSKGT PAW+S APDHETD
Subjt:  AEEMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

AT2G15890.2 maternal effect embryo arrest 14

1.1e-42

45.8

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Query:  MESFILRSISSPFLLEATDLRRTG-----SASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLE
        ++S  LRS   P  +E  D +        + S   VRCSS     +PKLE FSR K DR +++PPLIEK+ESEL+DYCSTLEGDDSYSCW+AYFELKDL 
Subjt:  MESFILRSISSPFLLEATDLRRTG-----SASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLE

Query:  VSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAE
                                         ER  PK EVE LILQ                     G E++  K +N          IPDGLPKS +
Subjt:  VSFCGSSINFAASFSVISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAE

Query:  EMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD
        E+EEEE+++MPDS FTRLLRSKGT PAW+S APDHETD
Subjt:  EMEEEERARMPDSPFTRLLRSKGTFPAWYSPAPDHETD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAATCGTTCATCCTCCGTTCCATTTCTTCGCCGTTTCTTCTCGAGGCTACGGATCTTCGCCGGACTGGATCCGCTTCCTCTTCTGCCGTTCGTTGTTCTTCCAGAAG
CCATGCTTATATTCCCAAGCTCGAGCCCTTCAGCCGGACCAAGCTCGACCGCGCCATCAAGGAGCCGCCTCTGATCGAGAAGTCTGAAAGCGAGCTTGCAGATTATTGTT
CGACGTTGGAAGGAGACGACTCGTATAGCTGTTGGAAAGCGTATTTCGAGCTTAAAGATCTTGAGGTGAGTTTCTGTGGATCATCGATTAATTTTGCTGCGAGTTTTTCT
GTTATTTCGTGTTTGATGATTTTTTTTTTCCCCGAATCTGGTGTACTTTTTGAAGAAAGGCATTCGCCAAAACAAGAAGTGGAGAAACTGATTCTCCAAGCGGGCGGCGT
GAAATCGCTAATCGGATGCTTACACGGCATCGCAGCCATACACAAGAGGAAGGGAAGCGAGAACAACGCTGCGAAGCCATTGAACGGCGCGGAAGGAAGAGAGACAGGTT
GTCCAATACCAGATGGATTGCCCAAATCCGCAGAGGAAATGGAAGAAGAAGAGCGAGCGAGAATGCCAGATTCGCCATTTACGAGATTGCTGAGAAGCAAAGGTACATTC
CCTGCTTGGTATTCCCCTGCACCCGATCACGAAACAGAT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MESFILRSISSPFLLEATDLRRTGSASSSAVRCSSRSHAYIPKLEPFSRTKLDRAIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLEVSFCGSSINFAASFS
VISCLMIFFFPESGVLFEERHSPKQEVEKLILQAGGVKSLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAEEMEEEERARMPDSPFTRLLRSKGTF
PAWYSPAPDHETD

MS020497 (gene) of Bitter gourd (TR) v1 genome