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MS020518 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020518
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold375:823688..824089
RNA-Seq ExpressionMS020518
SyntenyMS020518
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045945.1 uncharacterized protein E6C27_scaffold243G004890 [Cucumis melo var. makuwa]3.2e-6089.55Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MGVCASSQHS+ASLTNWPFTAKIIHTDG LQELRHPVKA HIL+QNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPL K+HLP+SLTDLC+LAA
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
        KANVALA+SKKA+PSLKAAP AVG+RIGA G SY
Subjt:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY

XP_022148561.1 uncharacterized protein LOC111017195 [Momordica charantia]6.0e-6799.25Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNP+CFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
        KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
Subjt:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY

XP_022944054.1 uncharacterized protein LOC111448604 [Cucurbita moschata]2.5e-5788.06Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MGVCASSQHSS SLTNWPFTAKIIH DG LQELRHPVKA HIL+QNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAKS LP+SLT LCALAA
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
        KANVALA+SKKAYPS+KAAP AV +RI APG SY
Subjt:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY

XP_022986185.1 uncharacterized protein LOC111484003 [Cucurbita maxima]8.1e-5686.57Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MGVCASSQHSS SLT W FTAKIIH DG LQELRHPVKA HIL+QNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAKS LP+SLT LCALAA
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
        KANVAL +SKKAYPS+KAAP AVG+RI APG SY
Subjt:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY

XP_023512236.1 uncharacterized protein LOC111777025 [Cucurbita pepo subsp. pepo]5.1e-5889.55Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MGVCASSQHSS SLTNWPFTAKIIH DG LQELRHPVKA HIL+QNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAKS LP+SLT LCALAA
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
        KANVALA+SKKAYPS+KAAP AVG RI APGASY
Subjt:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY

TrEMBL top hitse value%identityAlignment
A0A5D3CPA0 Uncharacterized protein1.5e-6089.55Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MGVCASSQHS+ASLTNWPFTAKIIHTDG LQELRHPVKA HIL+QNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPL K+HLP+SLTDLC+LAA
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
        KANVALA+SKKA+PSLKAAP AVG+RIGA G SY
Subjt:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY

A0A6J1D5R9 uncharacterized protein LOC1110171952.9e-6799.25Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNP+CFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
        KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
Subjt:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY

A0A6J1FVY0 uncharacterized protein LOC1114486041.2e-5788.06Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MGVCASSQHSS SLTNWPFTAKIIH DG LQELRHPVKA HIL+QNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAKS LP+SLT LCALAA
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
        KANVALA+SKKAYPS+KAAP AV +RI APG SY
Subjt:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY

A0A6J1G7N2 uncharacterized protein LOC1114516191.1e-5586.47Show/hide
Query:  MGVCASSQHSSA-SLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALA
        MGVCASSQ+SSA SLTNWP TAKIIHTDG LQELRHPVKAGHIL QNPNCFLCSSESMKIDSI+PQISS+RELELGEIYFLIPLAK+HLP+SLT+LC+LA
Subjt:  MGVCASSQHSSA-SLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALA

Query:  AKANVALATSKKAYPSLKAAPNAVGFRIGAPGA
        AKA+VALA SKK Y SLKAAP +VG+RIGAPGA
Subjt:  AKANVALATSKKAYPSLKAAPNAVGFRIGAPGA

A0A6J1JDD5 uncharacterized protein LOC1114840033.9e-5686.57Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MGVCASSQHSS SLT W FTAKIIH DG LQELRHPVKA HIL+QNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAKS LP+SLT LCALAA
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY
        KANVAL +SKKAYPS+KAAP AVG+RI APG SY
Subjt:  KANVALATSKKAYPSLKAAPNAVGFRIGAPGASY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein5.3e-1337.3Show/hide
Query:  MGVCAS---SQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHIL----------SQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSH
        MG+C S   +++ S+S      TAKI+  +G L+E   PV A  +L          S + + FLC+S+S+  D  +P I SD  L+  +IYF++P++K  
Subjt:  MGVCAS---SQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHIL----------SQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSH

Query:  LPLSLTDLCALAAKANVAL--ATSKK
          LS +D+ ALA KA+VA+  A  KK
Subjt:  LPLSLTDLCALAAKANVAL--ATSKK

AT2G23690.1 unknown protein2.2e-1941.28Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MG+C+S + +  +      TAK+I  DG + E   PVK G++L +NP CF+C+S+ M  D++V  IS+D E +LG++YF +PL+  H  L   ++ ALA 
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATS
        KA+ AL  S
Subjt:  KANVALATS

AT3G50800.1 unknown protein3.3e-1541.28Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MG CAS +           TAK+I  DG LQE   PVK   IL +NP  F+C+S+ M  D  V  +    +L  GE+YF++PL   + PL   ++ ALA 
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATS
        KA+ ALA S
Subjt:  KANVALATS

AT4G37240.1 unknown protein6.5e-1943.4Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MG+C+SS+ +  +      TAK+I  DG + E  +PVK G++L + P CF+C+S+ M  D  V  IS+D EL+LG+IYF +PL     PL   ++ ALA 
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVAL
        KA+ AL
Subjt:  KANVAL

AT5G66580.1 unknown protein4.3e-1539.45Show/hide
Query:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA
        MG CAS +   +       +AK+I  DG LQE   PVK   IL +NP  F+C+S+ M  D  V  ++ + EL  G++YF++PL   + PL   ++ ALA 
Subjt:  MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAA

Query:  KANVALATS
        KA+ AL  S
Subjt:  KANVALATS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGTTTGTGCCTCATCTCAGCACTCAAGTGCGAGCCTCACCAACTGGCCCTTCACTGCGAAAATTATTCATACAGATGGTGGGCTTCAGGAGTTGAGGCACCCAGT
AAAGGCCGGCCACATTCTTTCCCAGAATCCGAACTGTTTCCTCTGTAGCTCAGAATCTATGAAGATCGATTCAATCGTCCCCCAGATCTCCAGCGACAGAGAACTTGAAT
TGGGGGAAATTTATTTTCTAATCCCCCTCGCGAAATCCCATCTCCCGCTTTCCCTCACGGACTTGTGCGCTCTGGCTGCTAAAGCAAATGTAGCCCTCGCTACATCCAAG
AAGGCGTATCCGTCTCTGAAAGCGGCGCCGAACGCCGTCGGATTCCGAATCGGAGCGCCCGGTGCGTCTTAC
mRNA sequenceShow/hide mRNA sequence
ATGGGGGTTTGTGCCTCATCTCAGCACTCAAGTGCGAGCCTCACCAACTGGCCCTTCACTGCGAAAATTATTCATACAGATGGTGGGCTTCAGGAGTTGAGGCACCCAGT
AAAGGCCGGCCACATTCTTTCCCAGAATCCGAACTGTTTCCTCTGTAGCTCAGAATCTATGAAGATCGATTCAATCGTCCCCCAGATCTCCAGCGACAGAGAACTTGAAT
TGGGGGAAATTTATTTTCTAATCCCCCTCGCGAAATCCCATCTCCCGCTTTCCCTCACGGACTTGTGCGCTCTGGCTGCTAAAGCAAATGTAGCCCTCGCTACATCCAAG
AAGGCGTATCCGTCTCTGAAAGCGGCGCCGAACGCCGTCGGATTCCGAATCGGAGCGCCCGGTGCGTCTTAC
Protein sequenceShow/hide protein sequence
MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAAKANVALATSK
KAYPSLKAAPNAVGFRIGAPGASY