; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020526 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020526
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationscaffold375:893734..897488
RNA-Seq ExpressionMS020526
SyntenyMS020526
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457934.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo]2.0e-13391.58Show/hide
Query:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS
        + AS FTASLTFSV+S NRTSSIP LSRR S RS+VSALPRPYGDSSTIGLSSK+  APL+LDDKDFL  STSY PIEA+KGNPPIMPAVMTPGGPLDLS
Subjt:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQ +EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_022148642.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Momordica charantia]9.1e-14799.63Show/hide
Query:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS
        MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVS LPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS
Subjt:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_022948075.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata]1.3e-13289.74Show/hide
Query:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS
        + ASAFTASL FSVSS+NR SS+P LSRRNS+RS+VSA+PRPYGDSSTIGLSSK++ APL+LD+ DFLH STSY PI AKKGNPPIMPAVMTPGGPL+LS
Subjt:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_023007112.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita maxima]2.9e-13290.04Show/hide
Query:  ASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSV
        ASAFTASL FSVSS+NR SS+P LSRRNS+RS+VSA+PRPYGDSSTIGLSSK++  PL+LD+ DFLH STSY PI AKKGNPPIMPAVMTPGGPL+LSSV
Subjt:  ASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSV

Query:  LFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIH
        LFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIH
Subjt:  LFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIH

Query:  QPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        QPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  QPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_038902836.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida]6.6e-13792.99Show/hide
Query:  ASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSV
        ASAFTASL+FSVSS+NRTSSI  LSRRNS RS+VSALPRPYGDSSTIGLSSK++  PL +DDKDFLH STSY PIEA+KGNPPIMPAVMTPGGPLDLSSV
Subjt:  ASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSV

Query:  LFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIH
        LFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIH
Subjt:  LFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIH

Query:  QPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        QPQSGCGGHVEDVRRQVNEAVQSRHK+DKM++AFTGQP+EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  QPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

TrEMBL top hitse value%identityAlignment
A0A0A0LLX4 ATP-dependent Clp protease proteolytic subunit5.1e-12784.98Show/hide
Query:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS
        + AS FTASL+FSV+SNNR SSI  LSRRNS RS+VSA PRPYGDSSTIGLSSK+  APL+LDDKDFL  STSY PI A++ NPP+MPAVMTPGGPLDLS
Subjt:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGG VEDVRRQVNEAVQSR+K++KM++AFTGQ +E +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A1S3C7Y1 ATP-dependent Clp protease proteolytic subunit9.6e-13491.58Show/hide
Query:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS
        + AS FTASLTFSV+S NRTSSIP LSRR S RS+VSALPRPYGDSSTIGLSSK+  APL+LDDKDFL  STSY PIEA+KGNPPIMPAVMTPGGPLDLS
Subjt:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQ +EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1D5M0 ATP-dependent Clp protease proteolytic subunit4.4e-14799.63Show/hide
Query:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS
        MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVS LPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS
Subjt:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1G8P9 ATP-dependent Clp protease proteolytic subunit6.2e-13389.74Show/hide
Query:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS
        + ASAFTASL FSVSS+NR SS+P LSRRNS+RS+VSA+PRPYGDSSTIGLSSK++ APL+LD+ DFLH STSY PI AKKGNPPIMPAVMTPGGPL+LS
Subjt:  MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1KXP8 ATP-dependent Clp protease proteolytic subunit1.4e-13290.04Show/hide
Query:  ASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSV
        ASAFTASL FSVSS+NR SS+P LSRRNS+RS+VSA+PRPYGDSSTIGLSSK++  PL+LD+ DFLH STSY PI AKKGNPPIMPAVMTPGGPL+LSSV
Subjt:  ASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSV

Query:  LFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIH
        LFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIH
Subjt:  LFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIH

Query:  QPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        QPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  QPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

SwissProt top hitse value%identityAlignment
P54415 ATP-dependent Clp protease proteolytic subunit 16.3e-4246.03Show/hide
Query:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      D+ S L R RIIF+G+PV S VA R+++QL+ L   D + DI +Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA 
Subjt:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        LLA G KG R ++ +SRIMIHQP  G  G  +D+  Q NE +  +  ++++ +  TGQPL +++  T+RD F+S SEA+E+GLID V++
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE

Q317Y6 ATP-dependent Clp protease proteolytic subunit 48.3e-4245.81Show/hide
Query:  TSYRPIEAKKGNPPIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKV
        +SY  I    G    +P V+   G      D+ S L R RIIF+G  +N  V+  +++QL+ L   D + DI +Y+N PGGS  + +AIYD M  I P V
Subjt:  TSYRPIEAKKGNPPIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKV

Query:  GTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDG
         T+CFGVAAS GA LL+GG KG R A+PNSRIMIHQP  G  G   ++  Q  E +  +  ++ + +  TGQPLEK+ + TERD FLS SEA+E+GLID 
Subjt:  GTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDG

Query:  VLE
        V++
Subjt:  VLE

Q59993 ATP-dependent Clp protease proteolytic subunit 27.5e-4345.45Show/hide
Query:  LHASTSYR-PIEAKKGN--PPIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCM
        +++ + YR P+    GN    ++P V+   G      D+ S L R RIIF+G PV+  VA  +++QL+ L   D + DI +Y+N PGGS Y+ LAIYD M
Subjt:  LHASTSYR-PIEAKKGN--PPIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCM

Query:  SWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEAL
          I+P V T+CFG+AAS GA LL+GG KG R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQP+EK+Q+ TERD F+S  EA 
Subjt:  SWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEAL

Query:  EFGLIDGVL
        E+GLID V+
Subjt:  EFGLIDGVL

Q5N665 ATP-dependent Clp protease proteolytic subunit 16.3e-4246.03Show/hide
Query:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      D+ S L R RIIF+G+PV S VA R+++QL+ L   D + DI +Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA 
Subjt:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        LLA G KG R ++ +SRIMIHQP  G  G  +D+  Q NE +  +  ++++ +  TGQPL +++  T+RD F+S SEA+E+GLID V++
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE

Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic3.3e-10772.83Show/hide
Query:  MAASAFTASLTFSVSS---NNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPL
        MA  A +  L  S SS   N + +S    ++RN  R +VSAL  PYGDS   GLSS    +P+ +D+K     +  +  IEAKKGNPP+MP+VMTPGGPL
Subjt:  MAASAFTASLTFSVSS---NNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPL

Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        DLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D+M++AFTGQPLEKVQQYTERDRFLS SEALEFGLIDG+LETEY
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 55.2e-3944.22Show/hide
Query:  STSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTV
        S+ Y P  A+   PP M           + S LF+ RII  G  V+  +A  +++QL+ L  +D   DI++Y+N PGGS  + +AI+D M  I+P V TV
Subjt:  STSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTV

Query:  CFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVL
        C G+AAS GA LL+ G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   +  TGQ LEK+ Q T+RD F+S  EA E+GLIDGV+
Subjt:  CFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVL

AT1G11750.1 CLP protease proteolytic subunit 62.3e-10872.83Show/hide
Query:  MAASAFTASLTFSVSS---NNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPL
        MA  A +  L  S SS   N + +S    ++RN  R +VSAL  PYGDS   GLSS    +P+ +D+K     +  +  IEAKKGNPP+MP+VMTPGGPL
Subjt:  MAASAFTASLTFSVSS---NNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPL

Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        DLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D+M++AFTGQPLEKVQQYTERDRFLS SEALEFGLIDG+LETEY
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

AT1G11750.2 CLP protease proteolytic subunit 63.1e-10870.93Show/hide
Query:  MAASAFTASLTFSVSS---NNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDK----------DFLHASTSY---RPIEAKKGNP
        MA  A +  L  S SS   N + +S    ++RN  R +VSAL  PYGDS   GLSS    +P+ +D+K          + L +ST Y     IEAKKGNP
Subjt:  MAASAFTASLTFSVSS---NNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDK----------DFLHASTSY---RPIEAKKGNP

Query:  PIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLA
        P+MP+VMTPGGPLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLA
Subjt:  PIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLA

Query:  GGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        GGEKGMRYAMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D+M++AFTGQPLEKVQQYTERDRFLS SEALEFGLIDG+LETEY
Subjt:  GGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

AT1G66670.1 CLP protease proteolytic subunit 36.1e-4045.4Show/hide
Query:  LDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN
        LD +++L R RI+F+G  V+ + A  VISQL+ L   D + DI +++N PGGS  + + IYD M   K  V TVC G+AAS GA LLA G KG RY MPN
Subjt:  LDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN

Query:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        S++MIHQP    GG   ++  ++ E +  + K++K+FS  TG+P  +++  T+RD FL+  EA E+GLID V++
Subjt:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE

AT5G45390.1 CLP protease P43.5e-3534.6Show/hide
Query:  TFSVSSNNRTSSIPPLSRRNSQRSV-VSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTP--GGPLDLSSVLFRNR
        T S+SS+ + S +   SR NS  S   S+ P+P   ++     +K I  PL          +TS  P+     +  +     +   G   D+  +L R R
Subjt:  TFSVSSNNRTSSIPPLSRRNSQRSV-VSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTP--GGPLDLSSVLFRNR

Query:  IIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSG
        I+F+G  ++  VA  ++SQL+ L   D   DI +++N PGGS  + +AIYD +  ++  V T+  G+AAS  +++L  G KG R+AMPN+RIMIHQP  G
Subjt:  IIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSG

Query:  CGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
          G   DV  Q  E + +++ V  + +  T +  E+V +  +RDR++S  EA+E+GLIDGV++
Subjt:  CGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAATGGCAGCTTCTGCCTTCACTGCATCTCTCACCTTCTCCGTGTCCTCGAACAATAGAACTTCATCTATCCCTCCACTTTCTCGCAGAAATTCGCAGAGGTCGGTAGT
GTCTGCCCTGCCGAGGCCCTATGGCGACTCTTCAACTATTGGATTATCTAGTAAATCAATCAGAGCTCCTCTAAGCCTCGACGATAAAGATTTTCTTCACGCCAGTACAA
GTTATAGACCTATTGAAGCCAAAAAAGGTAATCCACCAATTATGCCTGCAGTGATGACACCGGGAGGGCCTTTGGACCTCTCGTCTGTGTTATTTAGGAATCGTATCATA
TTTATTGGCCAACCTGTCAACTCCATTGTGGCACAGCGAGTCATATCACAGCTTGTGACTCTAGCAACCATTGATGAGGATGCAGATATCCTGGTATATCTCAATTGCCC
CGGTGGAAGTACATACTCAGTATTAGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTCGGCACAGTGTGCTTTGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCC
TTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCGAATTCTCGAATTATGATTCATCAGCCACAGAGTGGATGTGGGGGTCACGTGGAAGATGTTAGACGGCAAGTC
AATGAAGCAGTTCAATCACGCCATAAAGTTGACAAGATGTTCTCTGCATTTACCGGACAGCCTCTTGAGAAAGTACAACAATACACCGAAAGAGATCGATTTTTGTCTGT
TTCTGAGGCTCTGGAATTTGGGCTCATTGACGGTGTGCTCGAGACAGAATAC
mRNA sequenceShow/hide mRNA sequence
GAAATGGCAGCTTCTGCCTTCACTGCATCTCTCACCTTCTCCGTGTCCTCGAACAATAGAACTTCATCTATCCCTCCACTTTCTCGCAGAAATTCGCAGAGGTCGGTAGT
GTCTGCCCTGCCGAGGCCCTATGGCGACTCTTCAACTATTGGATTATCTAGTAAATCAATCAGAGCTCCTCTAAGCCTCGACGATAAAGATTTTCTTCACGCCAGTACAA
GTTATAGACCTATTGAAGCCAAAAAAGGTAATCCACCAATTATGCCTGCAGTGATGACACCGGGAGGGCCTTTGGACCTCTCGTCTGTGTTATTTAGGAATCGTATCATA
TTTATTGGCCAACCTGTCAACTCCATTGTGGCACAGCGAGTCATATCACAGCTTGTGACTCTAGCAACCATTGATGAGGATGCAGATATCCTGGTATATCTCAATTGCCC
CGGTGGAAGTACATACTCAGTATTAGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTCGGCACAGTGTGCTTTGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCC
TTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCGAATTCTCGAATTATGATTCATCAGCCACAGAGTGGATGTGGGGGTCACGTGGAAGATGTTAGACGGCAAGTC
AATGAAGCAGTTCAATCACGCCATAAAGTTGACAAGATGTTCTCTGCATTTACCGGACAGCCTCTTGAGAAAGTACAACAATACACCGAAAGAGATCGATTTTTGTCTGT
TTCTGAGGCTCTGGAATTTGGGCTCATTGACGGTGTGCTCGAGACAGAATAC
Protein sequenceShow/hide protein sequence
EMAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSALPRPYGDSSTIGLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRII
FIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQV
NEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY