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MS020528 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020528
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionorgan-specific protein P4
Genome locationscaffold375:919697..919870
RNA-Seq ExpressionMS020528
SyntenyMS020528
Gene Ontology termsNA
InterPro domainsIPR024489 - Organ specific protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571127.1 hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1676.79Show/hide
Query:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH
        RKDQG+YWKK+MK EEIPE+LKELL+DDS V+ Q +RFM+NFDPHPNAIIYH+H+H
Subjt:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH

XP_022148637.1 organ-specific protein P4 [Momordica charantia]1.2e-2498.28Show/hide
Query:  GYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVDGQNERFMSNFDPHPNAIIYHSHSH
        GYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSV GQNERFMSNFDPHPNAIIYHSHSH
Subjt:  GYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVDGQNERFMSNFDPHPNAIIYHSHSH

XP_022944721.1 organ-specific protein P4-like [Cucurbita moschata]2.1e-1676.79Show/hide
Query:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH
        RKDQG+YWKK+MK EEIPE+LKELL+DDS V+ Q +RFM+NFDPHPNAIIYH+H+H
Subjt:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH

XP_022986644.1 organ-specific protein S2-like [Cucurbita maxima]2.1e-1676.79Show/hide
Query:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH
        RKDQG+YWKK+MK EEIPE+LKELL+DDS V+ Q +RFM+NFDPHPNAIIYH+H+H
Subjt:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH

XP_023513271.1 organ-specific protein S2-like [Cucurbita pepo subsp. pepo]2.1e-1676.79Show/hide
Query:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH
        RKDQG+YWKK+MK EEIPE+LKELL+DDS V+ Q +RFM+NFDPHPNAIIYH+H+H
Subjt:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH

TrEMBL top hitse value%identityAlignment
A0A6J1D5L4 organ-specific protein P45.9e-2598.28Show/hide
Query:  GYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVDGQNERFMSNFDPHPNAIIYHSHSH
        GYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSV GQNERFMSNFDPHPNAIIYHSHSH
Subjt:  GYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVDGQNERFMSNFDPHPNAIIYHSHSH

A0A6J1FYV4 organ-specific protein P4-like1.0e-1676.79Show/hide
Query:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH
        RKDQG+YWKK+MK EEIPE+LKELL+DDS V+ Q +RFM+NFDPHPNAIIYH+H+H
Subjt:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH

A0A6J1G7K5 organ-specific protein P4-like3.6e-1467.8Show/hide
Query:  YGRKDQGEYWKKIMKEEEIPEVLKELLYDD----SVDGQNERFMSNFDPHPNAIIYHSH
        + RK++GEYWKK+MK+E IPE+LKELL+DD    S D Q+E FM+NFD HPNAIIYHSH
Subjt:  YGRKDQGEYWKKIMKEEEIPEVLKELLYDD----SVDGQNERFMSNFDPHPNAIIYHSH

A0A6J1JGL9 organ-specific protein S2-like1.0e-1676.79Show/hide
Query:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH
        RKDQG+YWKK+MK EEIPE+LKELL+DDS V+ Q +RFM+NFDPHPNAIIYH+H+H
Subjt:  RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VDGQNERFMSNFDPHPNAIIYHSHSH

A0A6J1L3N5 organ-specific protein P4-like9.4e-1569.49Show/hide
Query:  YGRKDQGEYWKKIMKEEEIPEVLKELLYDD----SVDGQNERFMSNFDPHPNAIIYHSH
        + RK++GEYWKK+MK+E IPE+LKELL+DD    S D Q+ERFM+NFD HPNAIIYHSH
Subjt:  YGRKDQGEYWKKIMKEEEIPEVLKELLYDD----SVDGQNERFMSNFDPHPNAIIYHSH

SwissProt top hitse value%identityAlignment
P17771 Organ-specific protein P49.4e-0437.5Show/hide
Query:  RKDQGEYWKKIMKEEEIPEVLKELLYDDSVDG------QNERFMSNFDPHPNAIIY
        RKD GEYWK +MK++++PE ++ LL   ++        +N+  +  F+P PNA  Y
Subjt:  RKDQGEYWKKIMKEEEIPEVLKELLYDDSVDG------QNERFMSNFDPHPNAIIY

Arabidopsis top hitse value%identityAlignment
AT1G49310.1 unknown protein2.1e-0653.19Show/hide
Query:  EYWKKIMKEEEIPEVLKELLYDDSVDGQNERFMSNFDPHPNAIIYHS
        EYWKK+MK E +PE +KELL +     Q ERF+ NFD     IIYH+
Subjt:  EYWKKIMKEEEIPEVLKELLYDDSVDGQNERFMSNFDPHPNAIIYHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGTATGGAAGGAAGGATCAAGGGGAGTATTGGAAGAAAATAATGAAAGAGGAAGAAATTCCAGAGGTTCTAAAGGAGCTGTTATATGATGATTCAGTGGACGGCCAAAA
CGAGCGTTTTATGAGCAATTTTGACCCTCATCCCAACGCTATAATATACCACTCCCACTCCCAC
mRNA sequenceShow/hide mRNA sequence
GGGTATGGAAGGAAGGATCAAGGGGAGTATTGGAAGAAAATAATGAAAGAGGAAGAAATTCCAGAGGTTCTAAAGGAGCTGTTATATGATGATTCAGTGGACGGCCAAAA
CGAGCGTTTTATGAGCAATTTTGACCCTCATCCCAACGCTATAATATACCACTCCCACTCCCAC
Protein sequenceShow/hide protein sequence
GYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVDGQNERFMSNFDPHPNAIIYHSHSH