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MS020535 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020535
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEncodes a protein of unknown function that is a marker for oxidative stress response.
Genome locationscaffold375:984925..985346
RNA-Seq ExpressionMS020535
SyntenyMS020535
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045538.1 uncharacterized protein E6C27_scaffold243G00290 [Cucumis melo var. makuwa]3.4e-2984.27Show/hide
Query:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        Q EK S A  P   P+ SCRKKKN++ATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVADRNSE TNGVESSLPLRTTVSE
Subjt:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

XP_004148843.1 uncharacterized protein LOC101211034 [Cucumis sativus]8.9e-3085.39Show/hide
Query:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        Q EK S A  P   P+ SCRKKKN++ATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSE TNGVESSLPLRTTVSE
Subjt:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

XP_008460939.1 PREDICTED: uncharacterized protein LOC103499674 [Cucumis melo]3.4e-2984.27Show/hide
Query:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        Q EK S A  P   P+ SCRKKKN++ATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVADRNSE TNGVESSLPLRTTVSE
Subjt:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

XP_022146205.1 uncharacterized protein LOC111015478 [Momordica charantia]2.3e-4198.91Show/hide
Query:  QKAQNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        QKAQNEKLSAAGAPNP PMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
Subjt:  QKAQNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

XP_022946978.1 uncharacterized protein LOC111450996 [Cucurbita moschata]7.6e-2983.15Show/hide
Query:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        Q EK SAA  P   P+ SCRKKKN++ATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVAD+NSE T+GVESSLPLRTTVSE
Subjt:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

TrEMBL top hitse value%identityAlignment
A0A0A0LIQ4 Uncharacterized protein4.3e-3085.39Show/hide
Query:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        Q EK S A  P   P+ SCRKKKN++ATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSE TNGVESSLPLRTTVSE
Subjt:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

A0A1S3CDL9 uncharacterized protein LOC1034996741.6e-2984.27Show/hide
Query:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        Q EK S A  P   P+ SCRKKKN++ATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVADRNSE TNGVESSLPLRTTVSE
Subjt:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

A0A5A7TRS7 Uncharacterized protein1.6e-2984.27Show/hide
Query:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        Q EK S A  P   P+ SCRKKKN++ATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVADRNSE TNGVESSLPLRTTVSE
Subjt:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

A0A6J1CWM9 uncharacterized protein LOC1110154781.1e-4198.91Show/hide
Query:  QKAQNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        QKAQNEKLSAAGAPNP PMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
Subjt:  QKAQNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

A0A6J1G5B9 uncharacterized protein LOC1114509963.7e-2983.15Show/hide
Query:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        Q EK SAA  P   P+ SCRKKKN++ATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVAD+NSE T+GVESSLPLRTTVSE
Subjt:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21640.1 Encodes a protein of unknown function that is a marker for oxidative stress response.5.1e-1546.74Show/hide
Query:  EKLSAAGAPNP-APMASCRKK-KNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKM---FRMSKVVADRNSETTNGVESSLPLRTTVSE
        +K+     P P  P +SCRK+ K+D+ATF  +LKDH+DEFI+ASMDEHK+CFK T++K+   F  ++ VA++  E    VE   PL+T V++
Subjt:  EKLSAAGAPNP-APMASCRKK-KNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKM---FRMSKVVADRNSETTNGVESSLPLRTTVSE

AT3G05570.1 unknown protein3.5e-2463.33Show/hide
Query:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADR-NSETTNGVESSLPLRTTVSE
        + +K  A   P PA  +SCRKK  DDA FLED+KDHID+FINASMD+HK+CF KTI KMF +SK VAD+  SE   GVES LPL+TTVS+
Subjt:  QNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADR-NSETTNGVESSLPLRTTVSE

AT4G39235.1 unknown protein1.2e-2468.75Show/hide
Query:  APNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE
        +P PA M SCRKK  DDATF ED+KDHID+FI+ASMDEHKSCF+KTI KMF +SK VA++ +    GVES LPL+TTVSE
Subjt:  APNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGAAAGCCCAAAATGAAAAACTGTCAGCTGCAGGTGCTCCAAATCCAGCACCCATGGCTTCTTGTCGAAAGAAGAAGAATGATGACGCTACTTTCCTGGAGGATTTGAA
GGATCACATCGACGAGTTCATTAATGCATCCATGGACGAACACAAATCGTGCTTCAAGAAGACTATCAACAAGATGTTCCGAATGTCGAAAGTTGTAGCAGATAGGAACT
CAGAGACCACAAATGGAGTTGAAAGTTCTCTTCCTCTTCGAACAACAGTATCAGAA
mRNA sequenceShow/hide mRNA sequence
CAGAAAGCCCAAAATGAAAAACTGTCAGCTGCAGGTGCTCCAAATCCAGCACCCATGGCTTCTTGTCGAAAGAAGAAGAATGATGACGCTACTTTCCTGGAGGATTTGAA
GGATCACATCGACGAGTTCATTAATGCATCCATGGACGAACACAAATCGTGCTTCAAGAAGACTATCAACAAGATGTTCCGAATGTCGAAAGTTGTAGCAGATAGGAACT
CAGAGACCACAAATGGAGTTGAAAGTTCTCTTCCTCTTCGAACAACAGTATCAGAA
Protein sequenceShow/hide protein sequence
QKAQNEKLSAAGAPNPAPMASCRKKKNDDATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETTNGVESSLPLRTTVSE