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MS020546 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020546
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionaquaporin NIP1-1-like
Genome locationscaffold375:1075331..1075474
RNA-Seq ExpressionMS020546
SyntenyMS020546
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0015267 - channel activity (molecular function)
InterPro domainsIPR000425 - Major intrinsic protein
IPR023271 - Aquaporin-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594523.1 Aquaporin NIP1-1, partial [Cucurbita argyrosperma subsp. sororia]9.8e-0456.25Show/hide
Query:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
        +LSKDG I F  IS+VW LVV V+ YS+G+IS  H N  VTI F   R
Subjt:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
KAG7026507.1 Aquaporin NIP1-2 [Cucurbita argyrosperma subsp. argyrosperma]9.8e-0456.25Show/hide
Query:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
        +LSKDG I F  IS+VW LVV V+ YS+G+IS  H N  VTI F   R
Subjt:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
XP_022926570.1 aquaporin NIP1-1-like [Cucurbita moschata]9.8e-0456.25Show/hide
Query:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
        +LSKDG I F  IS+VW LVV V+ YS+G+IS  H N  VTI F   R
Subjt:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
XP_023003144.1 aquaporin NIP1-1-like [Cucurbita maxima]9.8e-0456.25Show/hide
Query:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
        +LSKDG I F  IS+VW LVV V+ YS+G+IS  H N  VTI F   R
Subjt:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
XP_023518201.1 aquaporin NIP1-1-like [Cucurbita pepo subsp. pepo]9.8e-0456.25Show/hide
Query:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
        +LSKDG I F  IS+VW LVV V+ YS+G+IS  H N  VTI F   R
Subjt:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
TrEMBL top hitse value%identityAlignment
A0A6J1ELH3 aquaporin NIP1-1-like4.7e-0456.25Show/hide
Query:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
        +LSKDG I F  IS+VW LVV V+ YS+G+IS  H N  VTI F   R
Subjt:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
A0A6J1KSG1 aquaporin NIP1-1-like4.7e-0456.25Show/hide
Query:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
        +LSKDG I F  IS+VW LVV V+ YS+G+IS  H N  VTI F   R
Subjt:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
SwissProt top hitse value%identityAlignment
P08995 Nodulin-261.2e-0453.66Show/hide
Query:  INFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
        I F  I++VW LV+TVL Y++G+IS GH N  VTI F + R
Subjt:  INFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR
Arabidopsis top hitse value%identityAlignment
AT4G18910.1 NOD26-like intrinsic protein 1;24.7e-0447.62Show/hide
Query:  DGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTN
        D A+    I++VW L V VL YS+G+IS  H N  VTI F +
Subjt:  DGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTN
AT4G19030.1 NOD26-like major intrinsic protein 12.1e-0439.13Show/hide
Query:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTN
        ++  D  +    I++VW L + VL YS+G+IS  H+N  VTI F +
Subjt:  DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTTGAGCAAAGACGGAGCTATCAATTTCTCAAGAATTTCAATGGTTTGGGATTTGGTTGTAACTGTTTTATCCTATTCTATTGGGTACATTTCCAATGGACATCTTAA
CCTTATTGTCACCATAGTATTCACCAATGTTAGG
mRNA sequenceShow/hide mRNA sequence
GATTTGAGCAAAGACGGAGCTATCAATTTCTCAAGAATTTCAATGGTTTGGGATTTGGTTGTAACTGTTTTATCCTATTCTATTGGGTACATTTCCAATGGACATCTTAA
CCTTATTGTCACCATAGTATTCACCAATGTTAGG
Protein sequenceShow/hide protein sequence
DLSKDGAINFSRISMVWDLVVTVLSYSIGYISNGHLNLIVTIVFTNVR