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MS020555 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020555
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionINVOLVED IN: phot .
Genome locationscaffold375:1151383..1151520
RNA-Seq ExpressionMS020555
SyntenyMS020555
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22690.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885)5.9e-0445.65Show/hide
Query:  HGLVLKLGLALDCFVQTLCFKCTSEFGDSGLAYQVFVKMSMRDVVS
        HGL++K+G A D FVQ       +E G+   A +VF +MS R+VVS
Subjt:  HGLVLKLGLALDCFVQTLCFKCTSEFGDSGLAYQVFVKMSMRDVVS

AT3G22690.2 INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification5.9e-0445.65Show/hide
Query:  HGLVLKLGLALDCFVQTLCFKCTSEFGDSGLAYQVFVKMSMRDVVS
        HGL++K+G A D FVQ       +E G+   A +VF +MS R+VVS
Subjt:  HGLVLKLGLALDCFVQTLCFKCTSEFGDSGLAYQVFVKMSMRDVVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATGGGTTGGTTCTGAAGTTGGGTCTGGCGTTGGACTGTTTTGTGCAAACATTGTGTTTCAAATGTACGTCGGAATTTGGCGACTCGGGTCTTGCATATCAAGTGTTTGT
TAAAATGTCCATGAGAGATGTAGTTTCA
mRNA sequenceShow/hide mRNA sequence
CATGGGTTGGTTCTGAAGTTGGGTCTGGCGTTGGACTGTTTTGTGCAAACATTGTGTTTCAAATGTACGTCGGAATTTGGCGACTCGGGTCTTGCATATCAAGTGTTTGT
TAAAATGTCCATGAGAGATGTAGTTTCA
Protein sequenceShow/hide protein sequence
HGLVLKLGLALDCFVQTLCFKCTSEFGDSGLAYQVFVKMSMRDVVS