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MS020563 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020563
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold375:1198815..1198997
RNA-Seq ExpressionMS020563
SyntenyMS020563
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.6e-0547.37Show/hide
Query:  VPLPYTPLLVELLTIREGLYFAISLGYSHLTVESDCLTTISLLRDDSETLGPERIWI
        VP P +PLL E+  I EGL FA +  ++HL VESD L  I L+R++  T G E+ W+
Subjt:  VPLPYTPLLVELLTIREGLYFAISLGYSHLTVESDCLTTISLLRDDSETLGPERIWI
TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248743.2e-0547.37Show/hide
Query:  VPLPYTPLLVELLTIREGLYFAISLGYSHLTVESDCLTTISLLRDDSETLGPERIWI
        VP P +PLL E+  I EGL FA +  ++HL VESD L  I L+R++  T G E+ W+
Subjt:  VPLPYTPLLVELLTIREGLYFAISLGYSHLTVESDCLTTISLLRDDSETLGPERIWI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGTCGGTACCTCTTCCTTACACACCTTTACTTGTTGAGCTTCTGACCATTCGTGAAGGTCTCTACTTCGCAATTTCTCTGGGCTATTCGCATTTAACAGTTGAATCGGA
CTGTCTCACCACCATTTCTCTTCTTCGAGATGATTCGGAAACCCTCGGTCCTGAACGGATTTGGATTCACGAC
mRNA sequenceShow/hide mRNA sequence
CGGTCGGTACCTCTTCCTTACACACCTTTACTTGTTGAGCTTCTGACCATTCGTGAAGGTCTCTACTTCGCAATTTCTCTGGGCTATTCGCATTTAACAGTTGAATCGGA
CTGTCTCACCACCATTTCTCTTCTTCGAGATGATTCGGAAACCCTCGGTCCTGAACGGATTTGGATTCACGAC
Protein sequenceShow/hide protein sequence
RSVPLPYTPLLVELLTIREGLYFAISLGYSHLTVESDCLTTISLLRDDSETLGPERIWIHD