CuGenDBv2

Gene ID	MS020576
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Squalene synthase
Genome location	scaffold375:1321938..1326317
RNA-Seq Expression	MS020576
Synteny	MS020576
Gene Ontology terms	GO:0008610 - lipid biosynthetic process (biological process) GO:0045338 - farnesyl diphosphate metabolic process (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004310 - farnesyl-diphosphate farnesyltransferase activity (molecular function) GO:0051996 - squalene synthase activity (molecular function)
InterPro domains	IPR002060 - Squalene/phytoene synthase IPR006449 - Squalene synthase-like IPR008949 - Isoprenoid synthase domain superfamily IPR019845 - Squalene/phytoene synthase, conserved site IPR033904 - Trans-isoprenyl diphosphate synthases, head-to-head IPR044844 - Trans-isoprenyl diphosphate synthases, eukaryotic-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AEM42980.1 squalene synthase [Siraitia grosvenorii]

7.7e-230

93.76

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAILRHPDDFYPL+KLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSF LVIQQL PELRNA+CIFYLVLRALDTVEDDTSIQTDIK+PILKAFHCH
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHAS LEDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGL LQKTNIIRDYLEDINEIPK RMFWPREIW KYADKLED KYE+NS KAVQCLNDLVTNAL H EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRT+T+ADVYGAFFDFSVMLKAKVNSSDPNA+KTLSRIEAIQKTC+QSGLLNKRKLY  +SEPM+NPTLIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQPM
        IILAY+SAKRLPANQP+
Subjt:  IILAYISAKRLPANQPM

ARE29881.1 squalene synthase [Trichosanthes truncata]

1.0e-229

93.29

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAILRHPDDFYPL+KLKMAAR  EKQIPPEPHWGFCYTMLHKVSRSF LVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIK+PILKAFHCH
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        I+NRDWHFSCGTKDYKVLMD+FHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKY DKLED KYE+NS KAVQCLNDLVTNAL H EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        YNNVEVFRGVVKMRRGLTAK+IDRTKTIADVYGAFFDFSVMLKAKVN SDPNA+KTLSRIEAIQKTCK+SGLLNKR LY+ RSEPMYNP +IVILFSL+C
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQPM
        IILAY+SAKRLPANQP+
Subjt:  IILAYISAKRLPANQPM

ARE29884.1 squalene synthase [Momordica cochinchinensis]

6.5e-237

96.64

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAILRHPDDFYPL+KLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSF LVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPIL AFH H
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNRDWHFSCGTKDYKVLMD+FHHVSTAFLELGKGYQEAIEDITKRMG GMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDL SDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        YNN+EVFRGVVKMRRGLTAKVIDRTKT+ADVYGAFFDFSVMLKAKVNSSDPNA+KTLSRIEAIQKTCKQSGLLNKRKLY+ RSEPMYNPTLIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQPM
        IILAY+SAKRLPANQP+
Subjt:  IILAYISAKRLPANQPM

ARE29890.1 squalene synthase [Luffa acutangula]

1.8e-231

94.24

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAILRHPDDFYPL+KLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSF LVIQQL+PELRNAVCIFYLVLRALDTVEDDTSIQTDIK+PIL AFHCH
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNRDWHFSCGTKDYKVLMD+FHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYADKLED KYEKNS KAVQCLNDLVTNAL H EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        YNNV+VFRGVVKMRRGLTAKVIDRTKT+ADVYGAFFDFSVMLKAKVN+SDPNASKTLSRIEAIQKTCKQSGLLNKRKLY+  SEPMYNP +IVILFSL+C
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQPM
        IILAY+SAKRLPANQP+
Subjt:  IILAYISAKRLPANQPM

XP_022146184.1 squalene synthase-like [Momordica charantia]

4.7e-243

99.76

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Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQPM
        IILAYISAKRLPANQP+
Subjt:  IILAYISAKRLPANQPM

TrEMBL top hits

e value

%identity

Alignment

A0A2R2WEV1 Squalene synthase

3.2e-237

96.64

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAILRHPDDFYPL+KLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSF LVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPIL AFH H
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNRDWHFSCGTKDYKVLMD+FHHVSTAFLELGKGYQEAIEDITKRMG GMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDL SDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        YNN+EVFRGVVKMRRGLTAKVIDRTKT+ADVYGAFFDFSVMLKAKVNSSDPNA+KTLSRIEAIQKTCKQSGLLNKRKLY+ RSEPMYNPTLIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQPM
        IILAY+SAKRLPANQP+
Subjt:  IILAYISAKRLPANQPM

A0A2R2WEW6 Squalene synthase

8.9e-232

94.24

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAILRHPDDFYPL+KLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSF LVIQQL+PELRNAVCIFYLVLRALDTVEDDTSIQTDIK+PIL AFHCH
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNRDWHFSCGTKDYKVLMD+FHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYADKLED KYEKNS KAVQCLNDLVTNAL H EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        YNNV+VFRGVVKMRRGLTAKVIDRTKT+ADVYGAFFDFSVMLKAKVN+SDPNASKTLSRIEAIQKTCKQSGLLNKRKLY+  SEPMYNP +IVILFSL+C
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQPM
        IILAY+SAKRLPANQP+
Subjt:  IILAYISAKRLPANQPM

A0A2R2WEZ7 Squalene synthase

4.9e-230

93.29

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAILRHPDDFYPL+KLKMAAR  EKQIPPEPHWGFCYTMLHKVSRSF LVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIK+PILKAFHCH
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        I+NRDWHFSCGTKDYKVLMD+FHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKY DKLED KYE+NS KAVQCLNDLVTNAL H EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        YNNVEVFRGVVKMRRGLTAK+IDRTKTIADVYGAFFDFSVMLKAKVN SDPNA+KTLSRIEAIQKTCK+SGLLNKR LY+ RSEPMYNP +IVILFSL+C
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQPM
        IILAY+SAKRLPANQP+
Subjt:  IILAYISAKRLPANQPM

A0A2R2WF36 Squalene synthase

2.3e-243

99.76

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQPM
        IILAYISAKRLPANQP+
Subjt:  IILAYISAKRLPANQPM

K7NBW9 Squalene synthase

3.7e-230

93.76

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAILRHPDDFYPL+KLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSF LVIQQL PELRNA+CIFYLVLRALDTVEDDTSIQTDIK+PILKAFHCH
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHAS LEDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGL LQKTNIIRDYLEDINEIPK RMFWPREIW KYADKLED KYE+NS KAVQCLNDLVTNAL H EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        YNNVEVFRGVVKMRRGLTAKVIDRT+T+ADVYGAFFDFSVMLKAKVNSSDPNA+KTLSRIEAIQKTC+QSGLLNKRKLY  +SEPM+NPTLIVILFSLLC
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQPM
        IILAY+SAKRLPANQP+
Subjt:  IILAYISAKRLPANQPM

SwissProt top hits

e value

%identity

Alignment

A0A1P7Y0A8 Squalene synthase 12

1.4e-202

80.72

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAIL+HPDDFYPL+KLK+AARHAEKQIP EPHW FCY+MLHKVSRSFGLVIQQL P+LR+AVCIFYLVLRALDTVEDDTSI T++K+PI+ AFHCH
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IY+ DWHFSCGTK+YKVLMD+FHHVS AFL+LG  Y+EAIEDIT RMGAGMAKFICKEVET+DDYDEYCHYVAGLVGLGLSKLFHAS  EDLA+DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKY DKLEDLKYE+NS KAVQCLND+VT+AL HAEDCL YMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        +NN +VFRGVVKMRRGLTAKVID+TKT++DVYGAFFDFS +LK+KV+++DPNA+KTLSR+EAIQKTCK+SG L+KRK YI  SE  +N  LI I+F +L 
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRLPANQ
        I+ AY+S+  LP  Q
Subjt:  IILAYISAKRLPANQ

D0VFU8 Squalene synthase

7.1e-202

81.71

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MG+L AIL++PDD YPL+KLK+AARHAEKQIPPEPHWGFCY ML KVSRSF LVIQQL  ELR+AVCIFYLVLRALDTVEDDTSI TD+K+PIL +FH H
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        +Y+R+WHF+CGTK+YKVLMDQFHHVSTAFLELGK YQ+AIEDIT RMGAGMAKFICKEVET DDYDEYCHYVAGLVGLGLSKLFHAS  EDLASDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKY +KLEDLKYE+NS KAVQCLND+VTNAL+H EDCLTYM NL D +IFRFCAIPQ+MAIGTLA+C
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        Y+N+EVFRGVVKMRRGLTAKVIDRTKT+ADVYGAFFDFS MLK+KVN++DPNA+KTL R++AI KTC+ SG LNKRK YI R+EP Y+P LIV++F +L 
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKR
        IILA +   R
Subjt:  IILAYISAKR

D2K762 Squalene synthase 3

2.1e-201

81.91

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAIL+HPDDFYPL+KLK+AARHAEKQIP EPHW FCY+MLHKVSRSFGLVIQQL P+LR+AVCIFYLVLRALDTVEDDTSI T++K+PI+ AFHCH
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IY+ DWHFSCGTK+YKVLMD+FHHVS AFL+LG  Y+EAIEDIT RMGAGMAKFICKEVET+DDYDEYCHYVAGLVGLGLSKLFHAS  EDLA+DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKY DKLEDLKYE+NS KAVQCLND+VTNAL H EDCL YMS+LRD +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSG-LLNKRKLYIARSEPMYNPTLIVILFSLL
        YNN++VFRGVVKMRRGLTAKVIDRT T++DVYG FFDFS MLK+KV+++DPNA+KTLSR+EAIQK CK SG L  KRK YI  +E  YN TLI+ILF +L
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSG-LLNKRKLYIARSEPMYNPTLIVILFSLL

Query:  CIILAYISA
         I+ AY+S+
Subjt:  CIILAYISA

O48666 Squalene synthase 1

1.6e-201

81.51

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLGAIL+HP+DFYPL+KLK AARHAEKQIPPEPHW FCY+MLHKVSRSFGLVIQQL P+LR+AVCIFYLVLRALDTVEDDTSI T++K+PIL AFH H
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IY++DWHFSCGTK+YKVLMD+FHHVS AFLELG GYQEAIEDIT RMGAGMAKFICKEVET++DYDEYCHYVAGLVGLGLSKLFHAS  EDLA+DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKY DKLEDLKYE+NS KAVQCLND+VT+AL HAEDCL YMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        +NN +VFRGVVKMRRGLTAKVID+TKT++DVYGAFFDFS +LK+KV+++DPNA+KTLSR+EAIQKTCK+SG L+KRK YI  SE  +N  LI I+F +L 
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKRL
        I+ AY+S+  L
Subjt:  IILAYISAKRL

P53800 Squalene synthase

1.9e-202

82.44

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSL AIL++P+D YPLVKLK+AARHAEKQIPP P+WGFCY+MLHKVSRSF LVIQQL  ELR+AVCIFYLVLRALDTVEDDTSI TD+K+PIL +FH H
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        +Y+R+WHFSCGTK+YKVLMDQFHHVSTAFLEL K YQ+AIEDIT RMGAGMAKFICKEVET DDYDEYCHYVAGLVGLGLSKLFHAS+ EDLASDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKY +KLE+LKYE NS KAVQCLND+VTNAL H EDCLTYMS LRD SIFRFCAIPQ+MAIGTLA+C
Subjt:  MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC
        Y+N+EVFRGVVKMRRGLTAKVIDRT+TIADVYGAFFDFS MLK+KVN++DPNA+KTL R+E I KTC+ SG LNKRK YI RSEP Y+P LIV++F +L 
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLC

Query:  IILAYISAKR
        IILA +S  R
Subjt:  IILAYISAKR

Arabidopsis top hits

e value

%identity

Alignment

AT4G34640.1 squalene synthase 1

4.3e-186

76.34

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSLG +LR+PDD YPL+K+K A   AEKQIPPEPHWGFCY+MLHKVSRSF LVIQQL  ELRNAVC+FYLVLRALDTVEDDTSI TD K+PIL AFH H
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASD--SLS
        IY+ DWH+SCGTK+YK+LMDQFHHVS AFLEL KGYQEAIE+IT+RMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLF A+  E L  D  ++S
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASD--SLS

Query:  NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLA
        NSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIW KYADKLEDLKYE+N++K+VQCLN++VTNAL H EDCL YM +LRD SIFRFCAIPQIMAIGTLA
Subjt:  NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLA

Query:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSL
        LCYNN +VFRGVVK+RRGLTAKVIDRTKT+ADVYGAF+DFS MLK KV+ +DPNASKTL+R+EA+QK C+ +G+L  RK Y+   +   N   I+++  L
Subjt:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSL

Query:  LCIILAYISA
        L I+ AY+ A
Subjt:  LCIILAYISA

AT4G34650.1 squalene synthase 2

9.2e-173

70.63

Show/hide

Query:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH
        MGSL  ILRHPD+ YPL+KLK+A   A+KQIP EPH  FCY++LHKVS+SF LVIQQL  ELRNAVC+FYL+LRALDTVEDDTS+  +IK+PIL AFH H
Subjt:  MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASD--SLS
        IY+ DWHFSCGTK+YK+LMDQFHHVS AFL+L KGYQEAIEDITKRMGAGMAKFICKEVET+DDYDEYCHY AGLVGLGLSK+F AS+LE L  D   +S
Subjt:  IYNRDWHFSCGTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASD--SLS

Query:  NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLA
        NS GLFLQKTNII+DYLEDINE PK RMFWPREIW KY DKLED K E+ + KAVQCLN++VTNAL H EDCL  +++LRD +IF+ CAIPQI+AIGTLA
Subjt:  NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLA

Query:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSL
        LCYNNV+VFRGVV++RRGL AKVIDRTKT+ DVYGAF+DFS ML+ KV+++DPNA KTL+R+E I+K CK++G L+KRK Y+   E       +V+   L
Subjt:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSL

Query:  LCIILAYISAKR
        L I++ Y+ A +
Subjt:  LCIILAYISAKR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGCAGTTTGGGGGCGATTTTGAGACACCCAGATGACTTTTACCCGCTTGTGAAACTGAAAATGGCCGCGAGGCATGCGGAGAAGCAGATCCCACCGGAGCCTCATTG
GGGATTCTGCTACACCATGCTGCATAAGGTCTCTCGAAGTTTTGGTCTCGTTATTCAGCAGCTTAAGCCCGAGCTTCGGAATGCTGTATGCATATTTTATCTGGTTCTGC
GAGCCCTCGACACTGTTGAGGATGATACAAGCATACAAACAGATATCAAATTGCCCATTCTGAAAGCTTTTCACTGTCACATATATAACCGTGATTGGCATTTTTCATGT
GGCACAAAGGATTACAAAGTTCTTATGGACCAGTTTCATCATGTTTCGACTGCATTTCTAGAACTTGGAAAAGGGTATCAGGAGGCCATTGAGGATATTACGAAACGGAT
GGGTGCAGGAATGGCTAAATTCATTTGTAAAGAGGTAGAGACAGTTGATGATTATGATGAATATTGCCACTACGTAGCCGGACTTGTTGGACTAGGTTTGTCTAAACTGT
TCCATGCTTCGAAATTAGAGGATTTGGCATCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACAAACATTATTCGAGATTACTTGGAGGACATCAACGAG
ATACCGAAGTGTCGGATGTTTTGGCCTCGTGAGATATGGAGCAAATATGCTGATAAACTAGAGGATCTTAAATATGAGAAGAATTCAGACAAGGCCGTGCAATGCCTCAA
TGATTTGGTCACCAATGCTTTGACTCATGCAGAGGATTGTTTGACATATATGTCTAACTTAAGAGATCTTTCGATATTTCGATTTTGCGCAATACCTCAGATTATGGCGA
TTGGAACTCTCGCATTGTGCTACAACAATGTCGAAGTCTTCAGGGGGGTGGTCAAAATGCGGCGGGGTCTTACCGCTAAGGTCATCGATCGAACAAAAACGATTGCTGAC
GTGTATGGAGCTTTCTTTGATTTTTCTGTTATGCTGAAGGCTAAGGTCAACAGCAGTGATCCTAATGCATCTAAAACCCTGAGCAGGATCGAAGCGATTCAGAAAACATG
CAAGCAGTCAGGACTCTTGAACAAGAGGAAACTGTATATAGCAAGAAGTGAGCCAATGTACAACCCAACTCTGATTGTCATACTTTTCAGCCTATTATGCATCATTCTCG
CTTATATCTCTGCGAAACGGTTACCAGCTAACCAACCCATG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGSLGAILRHPDDFYPLVKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLKPELRNAVCIFYLVLRALDTVEDDTSIQTDIKLPILKAFHCHIYNRDWHFSC
GTKDYKVLMDQFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNSMGLFLQKTNIIRDYLEDINE
IPKCRMFWPREIWSKYADKLEDLKYEKNSDKAVQCLNDLVTNALTHAEDCLTYMSNLRDLSIFRFCAIPQIMAIGTLALCYNNVEVFRGVVKMRRGLTAKVIDRTKTIAD
VYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQKTCKQSGLLNKRKLYIARSEPMYNPTLIVILFSLLCIILAYISAKRLPANQPM

MS020576 (gene) of Bitter gourd (TR) v1 genome