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MS020584 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020584
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionComplex I-B22
Genome locationscaffold375:1380630..1382724
RNA-Seq ExpressionMS020584
SyntenyMS020584
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR033034 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605042.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita argyrosperma subsp. sororia]2.2e-5092.52Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANK+VEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PP+GV +
Subjt:  PPAGVSL

KAG7035055.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-5092.52Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANK+VEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PP+GV +
Subjt:  PPAGVSL

XP_022146081.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia]3.2e-5497.2Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PPAG+ +
Subjt:  PPAGVSL

XP_022944756.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata]2.8e-5090.65Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANKHVEDLD ID++IA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PP G+ +
Subjt:  PPAGVSL

XP_038902763.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida]5.7e-5192.52Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEA+KHVEDLDTID+LIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PP G+ +
Subjt:  PPAGVSL

TrEMBL top hitse value%identityAlignment
A0A1S3CDS7 Complex I-B221.8e-5090.65Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEAN+HVEDLDTIDKLI +GEAS++KWRHPDPYIVPWAPGGSKFTRNP 
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PPAG+ +
Subjt:  PPAGVSL

A0A6J1CYA5 Complex I-B221.6e-5497.2Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PPAG+ +
Subjt:  PPAGVSL

A0A6J1FYY7 Complex I-B221.4e-5090.65Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANKHVEDLD ID++IA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PP G+ +
Subjt:  PPAGVSL

A0A6J1G8K3 Complex I-B225.2e-5091.59Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTL WAVHRHLFYRDASDLRERFEANK+VEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PP+GV +
Subjt:  PPAGVSL

A0A6J1J845 Complex I-B221.4e-5090.65Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANKHVEDLD ID++IA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PP G+ +
Subjt:  PPAGVSL

SwissProt top hitse value%identityAlignment
Q02369 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 94.3e-0934.02Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTR
        M+F S+  YL      +++V  LY+RAL+   +W +HR  +   A  LR RF+ +K+ +D+    +L+   E      +HP PYI P +PGG+ + R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTR

Q0MQE8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 96.2e-0834.02Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTR
        M+F ++  YL  R    ++V  LY+RAL+   +W V R  +   A  +R RFE +K+ +D+    +L+   E      +HP PYI P +PGG+ + R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTR

Q0MQE9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.4e-0732.99Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTR
        M+F ++  YL      +++V  LY+RAL+   +W V R  +   A  +R RFE +K+ +D+    +L+   E      +HP PYI P +PGG+ + R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTR

Q945M1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 93.6e-4883.18Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F  N+ VED+D IDKLIAHGEA +NKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PPAG+ +
Subjt:  PPAGVSL

Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 97.3e-0934.02Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTR
        M+F +   YL      +++V  LY+RAL+   +W +HR  +   A  +R RFE +K+ +D+    +L+   E    + +HP PYI P +PGG+ F R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTR

Arabidopsis top hitse value%identityAlignment
AT4G34700.1 LYR family of Fe/S cluster biogenesis protein2.6e-4983.18Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F  N+ VED+D IDKLIAHGEA +NKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPAGVSL
        PPAG+ +
Subjt:  PPAGVSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTCTCGTCGACGGCGGGGTATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATTCTGTACCGGCGAGCCCTCAAAGACACTCTCAACTGGGCAGTCCA
TCGCCATCTTTTCTACCGAGACGCTTCGGACCTGCGCGAGAGATTCGAGGCAAACAAGCACGTGGAAGATCTTGATACAATAGACAAACTTATAGCTCATGGGGAAGCTT
CCCATAATAAGTGGCGACATCCTGATCCATATATTGTTCCTTGGGCTCCAGGCGGTTCTAAGTTTACGCGAAACCCAACTCCACCTGCTGGAGTAAGTCTCTTTCAGATG
AACGTTCACCTATTTGATTTGTTTTCATCTTCTTTCCTTTTCTTCATTGCT
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTCTCGTCGACGGCGGGGTATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATTCTGTACCGGCGAGCCCTCAAAGACACTCTCAACTGGGCAGTCCA
TCGCCATCTTTTCTACCGAGACGCTTCGGACCTGCGCGAGAGATTCGAGGCAAACAAGCACGTGGAAGATCTTGATACAATAGACAAACTTATAGCTCATGGGGAAGCTT
CCCATAATAAGTGGCGACATCCTGATCCATATATTGTTCCTTGGGCTCCAGGCGGTTCTAAGTTTACGCGAAACCCAACTCCACCTGCTGGAGTAAGTCTCTTTCAGATG
AACGTTCACCTATTTGATTTGTTTTCATCTTCTTTCCTTTTCTTCATTGCT
Protein sequenceShow/hide protein sequence
MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPTPPAGVSLFQM
NVHLFDLFSSSFLFFIA