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MS020593 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020593
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationscaffold375:1484495..1484719
RNA-Seq ExpressionMS020593
SyntenyMS020593
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457626.1 PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]8.6e-3195.77Show/hide
Query:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        N SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGE+AFI LTSRLQ
Subjt:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

XP_011649267.1 auxin-responsive protein SAUR24 [Cucumis sativus]2.5e-3094.37Show/hide
Query:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        N SAVPKGHVAVYVGEFQRKRFVIPISYLNH SFQQLLSRAEEEFGFDHPEGGLTIPCGE+AFI LTSRLQ
Subjt:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

XP_022146177.1 auxin-responsive protein SAUR24-like [Momordica charantia]8.3e-3498.67Show/hide
Query:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQLQVS
        NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFI LTSRLQLQVS
Subjt:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQLQVS

XP_022944378.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.9e-3092.96Show/hide
Query:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        N SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL+RAEEEFGFDHPEGGLTIPCGE+AF+ LTSRLQ
Subjt:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

XP_023512614.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]1.5e-3094.37Show/hide
Query:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        N SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL+RAEEEFGFDHPEGGLTIPCGE+AFI LTSRLQ
Subjt:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

TrEMBL top hitse value%identityAlignment
A0A0A0LJ85 Uncharacterized protein1.2e-3094.37Show/hide
Query:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        N SAVPKGHVAVYVGEFQRKRFVIPISYLNH SFQQLLSRAEEEFGFDHPEGGLTIPCGE+AFI LTSRLQ
Subjt:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

A0A1S3C5H8 auxin-responsive protein SAUR24-like4.2e-3195.77Show/hide
Query:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        N SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGE+AFI LTSRLQ
Subjt:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

A0A5A7TUZ6 Auxin-responsive protein SAUR24-like4.2e-3195.77Show/hide
Query:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        N SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGE+AFI LTSRLQ
Subjt:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

A0A6J1CYV6 auxin-responsive protein SAUR24-like4.0e-3498.67Show/hide
Query:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQLQVS
        NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFI LTSRLQLQVS
Subjt:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQLQVS

A0A6J1FY01 auxin-responsive protein SAUR24-like9.3e-3192.96Show/hide
Query:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        N SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL+RAEEEFGFDHPEGGLTIPCGE+AF+ LTSRLQ
Subjt:  NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.6e-2270.59Show/hide
Query:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRL
        SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC E+ FI +TSRL
Subjt:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRL

Q9FJF7 Auxin-responsive protein SAUR229.0e-2369.57Show/hide
Query:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++E+EFGFDHP GGLTIPC E+ FI +TSRLQ
Subjt:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.5e-2269.57Show/hide
Query:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        SA PKG +AVYVGE Q+KR+++P+SYL+  SFQ LLS++EEEFGFDHP GGLTIPC E+ FI +TSRLQ
Subjt:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR206.9e-2371.01Show/hide
Query:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        SA PKG +AVYVGE Q+KR+++PISYLN  SFQ LLS++EEEFGFDHP GGLTIPC E+ FI +TSR Q
Subjt:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

Q9FK62 Auxin-responsive protein SAUR243.1e-2371.01Show/hide
Query:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC E+ FI +TSRLQ
Subjt:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.9e-2367.61Show/hide
Query:  NTSAVPKGHVAVYVGE-FQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRL
        N  A+PKGH+AVYVGE  Q++RFV+P++YL+H  FQ+LL +AEEEFGFDHP GGLTIPC E+ FI L SRL
Subjt:  NTSAVPKGHVAVYVGE-FQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRL

AT5G18020.1 SAUR-like auxin-responsive protein family4.9e-2471.01Show/hide
Query:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        SA PKG +AVYVGE Q+KR+++PISYLN  SFQ LLS++EEEFGFDHP GGLTIPC E+ FI +TSR Q
Subjt:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

AT5G18030.1 SAUR-like auxin-responsive protein family1.1e-2369.57Show/hide
Query:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        SA PKG +AVYVGE Q+KR+++P+SYL+  SFQ LLS++EEEFGFDHP GGLTIPC E+ FI +TSRLQ
Subjt:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

AT5G18050.1 SAUR-like auxin-responsive protein family6.4e-2469.57Show/hide
Query:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++E+EFGFDHP GGLTIPC E+ FI +TSRLQ
Subjt:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family2.2e-2471.01Show/hide
Query:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ
        SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC E+ FI +TSRLQ
Subjt:  SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATACATCCGCCGTGCCGAAAGGTCATGTCGCCGTCTACGTCGGAGAGTTCCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTCCAGCAGCT
TCTCAGTCGAGCGGAGGAAGAGTTCGGATTCGATCATCCGGAGGGCGGTTTGACGATTCCTTGTGGAGAAGAGGCGTTTATCGTTCTCACTTCTAGATTGCAATTGCAAG
TCTCT
mRNA sequenceShow/hide mRNA sequence
AATACATCCGCCGTGCCGAAAGGTCATGTCGCCGTCTACGTCGGAGAGTTCCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTCCAGCAGCT
TCTCAGTCGAGCGGAGGAAGAGTTCGGATTCGATCATCCGGAGGGCGGTTTGACGATTCCTTGTGGAGAAGAGGCGTTTATCGTTCTCACTTCTAGATTGCAATTGCAAG
TCTCT
Protein sequenceShow/hide protein sequence
NTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIVLTSRLQLQVS