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MS020603 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020603
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold375:1572050..1572424
RNA-Seq ExpressionMS020603
SyntenyMS020603
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3434655.1 hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis]9.9e-3261.9Show/hide
Query:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLY-STGGLINFRFRRLATESTN
        M+W YPKRRGPEWKQGW GQTL S+S+P   LLTIFGIVIVLL FSQ+TG + Q+ ++  NFQL L +LPIL+IFFM+LY S+GG  NF+ RR   E+ +
Subjt:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLY-STGGLINFRFRRLATESTN

Query:  R-GASPWTIAILVPLVLVLLYFLPSF
        R G SPW +AIL+ L+LVLL +  SF
Subjt:  R-GASPWTIAILVPLVLVLLYFLPSF

KAG7010871.1 hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-4077.78Show/hide
Query:  MDWLYPKRRGPEWKQGWAGQTL-GSVSSPSPQLLTIFGIVIVLLCFSQ-FTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATEST
        M+WL PKRRGPEWKQ W GQTL GSVSSP PQLLTIFGIVIVLL FSQ  TG +TQM+RSA+NFQLLLFLLPILVIFFMS YS  GLIN R  R AT S 
Subjt:  MDWLYPKRRGPEWKQGWAGQTL-GSVSSPSPQLLTIFGIVIVLLCFSQ-FTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATEST

Query:  NRGASPWTIAILVPLVLVLLYFLPSF
         RGASP TI ILV L+LVLLYF PSF
Subjt:  NRGASPWTIAILVPLVLVLLYFLPSF

KGN61894.1 hypothetical protein Csa_005908 [Cucumis sativus]1.9e-3067.72Show/hide
Query:  MDWLYPKRRGPEWKQG--WAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQF-TGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATES
        MD  YPKRRGPEWK+G    GQTL SVS P  QLL IFGIVIVLL FSQF  G E Q+ RS   FQL LFLLPI VIFFM  YS+  LINF FRR  T  
Subjt:  MDWLYPKRRGPEWKQG--WAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQF-TGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATES

Query:  TNRGASPWTIAILVPLVLVLLYFLPSF
          RGASPWTIAILV L+LVLLY+  SF
Subjt:  TNRGASPWTIAILVPLVLVLLYFLPSF

PON55102.1 Transmembrane protein [Parasponia andersonii]5.5e-3056.35Show/hide
Query:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR
        M W YPKRRGP+WKQGW  QT+ SVS+PS  LL IF IV+VLL  SQ+TG + Q+ ++A NFQL +FLLP+L+I FM+ YS+ GL NFRFRR   ++  +
Subjt:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR

Query:  --GASPWTIAILVPLVLVLLYFLPSF
          G+SPW +A+ V L+LVLL +  SF
Subjt:  --GASPWTIAILVPLVLVLLYFLPSF

PON83413.1 Transmembrane protein [Trema orientale]2.4e-3055.56Show/hide
Query:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR
        M+W YPKRRGP+WKQGW  QT+ S+S+PS  LL IF IV+VLL  SQ+TG + Q+ ++A NFQL +FLLP+L+I FM+ YS+ GL NFRFRR   ++  +
Subjt:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR

Query:  --GASPWTIAILVPLVLVLLYFLPSF
          G+SPW +A  V L+LVLL +  SF
Subjt:  --GASPWTIAILVPLVLVLLYFLPSF

TrEMBL top hitse value%identityAlignment
A0A0A0LLH8 Uncharacterized protein9.1e-3167.72Show/hide
Query:  MDWLYPKRRGPEWKQG--WAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQF-TGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATES
        MD  YPKRRGPEWK+G    GQTL SVS P  QLL IFGIVIVLL FSQF  G E Q+ RS   FQL LFLLPI VIFFM  YS+  LINF FRR  T  
Subjt:  MDWLYPKRRGPEWKQG--WAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQF-TGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATES

Query:  TNRGASPWTIAILVPLVLVLLYFLPSF
          RGASPWTIAILV L+LVLLY+  SF
Subjt:  TNRGASPWTIAILVPLVLVLLYFLPSF

A0A1Q3DG80 Uncharacterized protein3.4e-3056.8Show/hide
Query:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR
        M+W Y KRRGPEWKQGW GQT+ S+S+P   LLT+FGIVIVLL  SQ+T   +Q++ +A NF+L +FLLPIL+IFFM+ +S+ G  NF+  R+   +  R
Subjt:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR

Query:  -GASPWTIAILVPLVLVLLYFLPSF
         G SPW +AILV LVLVLL +  SF
Subjt:  -GASPWTIAILVPLVLVLLYFLPSF

A0A2P5C233 Transmembrane protein2.6e-3056.35Show/hide
Query:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR
        M W YPKRRGP+WKQGW  QT+ SVS+PS  LL IF IV+VLL  SQ+TG + Q+ ++A NFQL +FLLP+L+I FM+ YS+ GL NFRFRR   ++  +
Subjt:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR

Query:  --GASPWTIAILVPLVLVLLYFLPSF
          G+SPW +A+ V L+LVLL +  SF
Subjt:  --GASPWTIAILVPLVLVLLYFLPSF

A0A2P5ED06 Transmembrane protein1.2e-3055.56Show/hide
Query:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR
        M+W YPKRRGP+WKQGW  QT+ S+S+PS  LL IF IV+VLL  SQ+TG + Q+ ++A NFQL +FLLP+L+I FM+ YS+ GL NFRFRR   ++  +
Subjt:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR

Query:  --GASPWTIAILVPLVLVLLYFLPSF
          G+SPW +A  V L+LVLL +  SF
Subjt:  --GASPWTIAILVPLVLVLLYFLPSF

A0A6P6AE81 uncharacterized protein LOC1113087734.5e-3056.8Show/hide
Query:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR
        M+W+YP+RRGP+WKQGW GQTL SVS+P   LLTIFGIV+VLL  SQ+TG + +++ +A NFQL + +LPIL+IFFM  +S+ G + F  +RL  E+ +R
Subjt:  MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNR

Query:  -GASPWTIAILVPLVLVLLYFLPSF
         G SPW IAILV ++LVLL +  SF
Subjt:  -GASPWTIAILVPLVLVLLYFLPSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGTTGTATCCAAAGAGGAGGGGTCCAGAGTGGAAGCAGGGATGGGCAGGCCAAACCCTAGGCTCTGTTTCTTCTCCATCACCTCAATTGCTCACAATCTTTGG
CATTGTTATTGTCTTGCTTTGCTTCTCTCAGTTCACAGGTGCTGAAACTCAAATGTATCGCTCAGCTGCCAATTTCCAGCTGCTTCTCTTCTTGCTGCCAATCTTGGTGA
TTTTCTTCATGTCTTTATATTCCACTGGTGGACTGATCAACTTCCGATTCCGGCGACTCGCAACCGAGTCGACTAATCGGGGTGCCTCGCCATGGACCATCGCTATTTTG
GTCCCTCTCGTTCTGGTTTTGCTTTATTTCCTACCCTCGTTCCGT
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGTTGTATCCAAAGAGGAGGGGTCCAGAGTGGAAGCAGGGATGGGCAGGCCAAACCCTAGGCTCTGTTTCTTCTCCATCACCTCAATTGCTCACAATCTTTGG
CATTGTTATTGTCTTGCTTTGCTTCTCTCAGTTCACAGGTGCTGAAACTCAAATGTATCGCTCAGCTGCCAATTTCCAGCTGCTTCTCTTCTTGCTGCCAATCTTGGTGA
TTTTCTTCATGTCTTTATATTCCACTGGTGGACTGATCAACTTCCGATTCCGGCGACTCGCAACCGAGTCGACTAATCGGGGTGCCTCGCCATGGACCATCGCTATTTTG
GTCCCTCTCGTTCTGGTTTTGCTTTATTTCCTACCCTCGTTCCGT
Protein sequenceShow/hide protein sequence
MDWLYPKRRGPEWKQGWAGQTLGSVSSPSPQLLTIFGIVIVLLCFSQFTGAETQMYRSAANFQLLLFLLPILVIFFMSLYSTGGLINFRFRRLATESTNRGASPWTIAIL
VPLVLVLLYFLPSFR