; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020633 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020633
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationscaffold375:1776926..1777813
RNA-Seq ExpressionMS020633
SyntenyMS020633
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]4.4e-9461.75Show/hide
Query:  MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSD
        MGR  R   RR    I+EVW+ NFD E+  L  CL    IL+IDTEFPG IRSTPWG+I+E++Y+D RFNVN+TKLIQLGLTASDE G +  +WEFNFSD
Subjt:  MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSD

Query:  FDPQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQ
        FD QIDT N SS+SFL+QNGLDF KLK+ GIP++ FT     + R+ R+ +WVTFHGLYDIGYL+KAMGVA E+PESMEEFAE+V R +G V DLK +A+
Subjt:  FDPQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQ

Query:  FCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQIPYGL
        +CEGLE G++GLE+L +L+ +KRFG KHHAGSDSLLTA ++AKM   F L S   DG LYGL+ +L   +K+ Q +MFGQI   L
Subjt:  FCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQIPYGL

KAG7027009.1 putative CCR4-associated factor 1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-9359.5Show/hide
Query:  RGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFD
        RG RG     N  IREVW+ N D E+  L+ CL  Y +++IDTEFPG I+ TPWG I+E+LY DFRFNVN+TK+IQLG+T SDE+GNIG TWEFNFSDFD
Subjt:  RGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFD

Query:  PQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFC
        P+ID HN +S+ FLKQNGLDF KLK+ GI + +F  +  +  RKH I RW+TFHGLYDIGYL+ AMGV   +PE++ EF  +V R +G V DLKHMA+FC
Subjt:  PQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFC

Query:  EGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQI
        EGLE G LGLEKL QL++QKRFG KHHAGSDSL+TA L+ KM  +++  +E+CDGFLYGL  +    + L  + ++ QI
Subjt:  EGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQI

XP_022146113.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]1.3e-17099.32Show/hide
Query:  MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSD
        MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSD
Subjt:  MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSD

Query:  FDPQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQ
        FDPQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQ
Subjt:  FDPQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQ

Query:  FCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQIPYGLRVCYPPCYIAY
        FCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRI+LHAKIKLYQNLMFGQIPYGLR CYPPCYIAY
Subjt:  FCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQIPYGLRVCYPPCYIAY

XP_023533172.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]1.7e-9359.86Show/hide
Query:  RGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFD
        RG RG     N  IREVW+ N D E+  L+ CL  Y +++IDTEFPG I+ TPWG I+E+LY DFRFNVN+TK+IQLG+T SDE+GNIG TWEFNFSDFD
Subjt:  RGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFD

Query:  PQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFC
        P+ID HN +S+ FLKQNGLDF KLK+ GI + +F  +  +  RKH I RWVTFHGLYDIGYL+ AMGV   +PE++ EF  +V R +G V DLKHMA+FC
Subjt:  PQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFC

Query:  EGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQI
        EGLE G LGLEKL QL++QKRFG KHHAGSDSL+TA L+ KM  +++  +E+CDGFLYGL  +    + L  + ++ QI
Subjt:  EGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQI

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]4.8e-10159.8Show/hide
Query:  GHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQID
        G +R   + I +VW+ NFD E++ L +CL  + I++IDTEFPGFIR++PWG+I+E LY+DFRFNVN+TKLIQLGLTA D+ G IG +WEFNFSDFDP+ID
Subjt:  GHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQID

Query:  THNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLE
          + SS SFL+QNGLDF+KLK++GIPIN FT+K   + RKH + RWVTFHGLYDIGYL+KAMG+   +PE+MEEFA +V R LG V DLKHMA+FCEGLE
Subjt:  THNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLE

Query:  DGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHA---KIKLYQN--LMFGQIPYGLRV-CYPPCYIAY
        DGKLGLE+L +L++QKR+G KH+AGSDSLLTAS + +M  +F++ +E+CDG+LYG   +L +    + ++    + FGQIPY + + CY P YI Y
Subjt:  DGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHA---KIKLYQN--LMFGQIPYGLRV-CYPPCYIAY

TrEMBL top hitse value%identityAlignment
A0A6J1CXP9 Poly(A)-specific ribonuclease6.2e-17199.32Show/hide
Query:  MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSD
        MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSD
Subjt:  MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSD

Query:  FDPQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQ
        FDPQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQ
Subjt:  FDPQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQ

Query:  FCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQIPYGLRVCYPPCYIAY
        FCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRI+LHAKIKLYQNLMFGQIPYGLR CYPPCYIAY
Subjt:  FCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQIPYGLRVCYPPCYIAY

A0A6J1G7L2 Poly(A)-specific ribonuclease2.6e-9263.53Show/hide
Query:  MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSD
        MGR  R   RR    I+EVW+ NFD E+  L  CL    IL+IDTEFPG IRSTPWG+I+E++Y+D RFNVN+TKLIQLGLTASDE G +  +WEFNFSD
Subjt:  MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSD

Query:  FDPQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQ
        FD QIDT N SS++FL+QNGLDF KLK+ GIP++ FT     + R+ R+ +WVTFHGLYDIGYL+KAMGVA E+PESMEEFAE+V R +G V DLK +A+
Subjt:  FDPQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQ

Query:  FCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRL
        +CEGLE G++GLE+L +L+ +KRFG KHHAGSDSLLTA ++AKM   F L SE  DG LYGLR +L
Subjt:  FCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRL

A0A6J1G7T4 Poly(A)-specific ribonuclease5.7e-9259.5Show/hide
Query:  RGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFD
        RG RG     N  IREVW+ N D E+  L+ CL  Y I++IDTEFPG I+ TPWG  +E+LY DFRFNVN+TK+IQLG+T SDE GNIG TWEFNFSDFD
Subjt:  RGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFD

Query:  PQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFC
        P+ID HN +S+ FLKQNGLDF KLK+ GI + +F  +  +   KH I RWVTFHGLYDIGYL+ AMGV   +PE++ EF  +V R +G V DLKHMA+FC
Subjt:  PQIDTHNASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFC

Query:  EGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQI
        EGLE G LGLEKL QL++QKRFG KHHAGSDSL+TA L+ KM  +++  +E+CDGFLYGL  +    + L  + ++ QI
Subjt:  EGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQI

A0A6J1I3Q4 Poly(A)-specific ribonuclease5.7e-9258.82Show/hide
Query:  RRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHN
        R  N  I EVW+ N D E+  L+ CL LYP+++IDTEFPG I+ TPWG I+E+LY DFRFNVN+TK+IQLG+T SDE GNIG TWEFNFSDFDP+ID HN
Subjt:  RRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHN

Query:  ASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGK
         +S+ FLKQNGLDF KLK+ GI + +F  +  +  RKH I +W+TFHGLYDIGYL+ A+GV   +PE++ EF  +V R +G V DLKHMA+FCEGLE G 
Subjt:  ASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGK

Query:  LGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQI
        LGLEKL QL++QKRFG KHHAGSDSL+T  L+ KM   ++  +E+CDGFLYGL  +    + +  + ++ QI
Subjt:  LGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQI

A0A6J1I6H7 Poly(A)-specific ribonuclease2.0e-9259.19Show/hide
Query:  RRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHN
        R  N  I EVW+ N D E+  L+ CL LYP+++IDTEFPG I+ TPWG I+E+LY DFRFNVN+TK+IQLG+T SDE GNIG TWEFNFSDFDP+ID HN
Subjt:  RRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHN

Query:  ASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGK
         +S+ FLKQNGLDF KLK+ GI + +F  +  +  RKH I +W+TFHGLYDIGYL+ A+GV   +PE++ EF  +V R +G V DLKHMA+FCEGLE G 
Subjt:  ASSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGK

Query:  LGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQI
        LGLEKL QL++QKRFG KHHAGSDSL+TA L+ KM   ++  +E+CDGFLYGL  +    + +  + ++ QI
Subjt:  LGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQI

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 54.2e-4745.41Show/hide
Query:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK
        EVW  N   E+ ++ DCL     + IDTEFPG ++ TP  A +E  Y D +FNV+ T LIQLGLT   +   I  TWE N SDF+      N  S++FLK
Subjt:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK

Query:  QNGLDFDKLKEFGIPINEFTSK-AFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL
         NGLD DK++E GI I EF  + +  L  KH  +RWVTF G YD  YLLK +     +PE+ +EF E V++ LG  V D+K MA  C GL   + GL+++
Subjt:  QNGLDFDKLKEFGIPINEFTSK-AFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL

Query:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM
        A ++  +R G  HHAGSDS LTA ++ K+
Subjt:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM

Q9C6M9 Putative CCR4-associated factor 1 homolog 44.2e-4744.98Show/hide
Query:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK
        EVW  N ++E+ ++ DCL  +  + IDTEFPG ++ TP  A EE  Y D +FNV+ T LIQLG T  D  G I  TWE N SDF+      N  S++FLK
Subjt:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK

Query:  QNGLDFDKLKEFGIPINE-FTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL
         NGL+ DK+ E GI I E F   +  L  K   + WV F G YD  YL+K +     +PE+ EEF E VE+ LG  V D+K +A+ C GL   + GL+++
Subjt:  QNGLDFDKLKEFGIPINE-FTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL

Query:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM
        A ++  KR G  HHAGSDS LTA ++ K+
Subjt:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 84.0e-5050Show/hide
Query:  LNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNGLDFDKLKEFG
        + DCL  Y  + IDTEFP  +R T   A +E+ Y D  F+V+R KLIQLGLT  D  G IG TWE NFSDF    D  N  S+ FL++NGLD  K++E G
Subjt:  LNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNGLDFDKLKEFG

Query:  IPINEFTSKAFFLFRK-HRIVRWVTFHGLYDIGYLLKAMGVAGE-IPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKH
        I I  F S+ F++ +K  R + WVTFHG YDI YLLK  G  GE +P + E F++ V R LG+V DLK MA  CEGL   +LGLE LA      R G  H
Subjt:  IPINEFTSKAFFLFRK-HRIVRWVTFHGLYDIGYLLKAMGVAGE-IPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKH

Query:  HAGSDSLLTASLYAKMKNQFEL
        HAGS++ LTA ++AK+ + F L
Subjt:  HAGSDSLLTASLYAKMKNQFEL

Q9SFX6 Putative CCR4-associated factor 1 homolog 34.2e-4744.54Show/hide
Query:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK
        EVW  N ++E+ ++ DCL     + IDTEFPG ++ TP  A EE  Y D +FNV+ T LIQLG T  D  G    TWE N SDFD      N  S++FLK
Subjt:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK

Query:  QNGLDFDKLKEFGIPINE-FTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL
         NGL+ DK++E GI I+E F   +  L  K   + WV F G YD  YL+K +     +PE+ EEF E V++ LG  V D+K +A+ C GL   + GL+++
Subjt:  QNGLDFDKLKEFGIPINE-FTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL

Query:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM
        A ++  KR G  HHAGSDS LTA ++ K+
Subjt:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.2e-4942.34Show/hide
Query:  REVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFL
        R VW  N D E+A + +CL  +P++  DTE+PG I  T + +  ++ Y   + NV  TKLIQ G T  +  G IG  WE NFS+F    DT N  S+ FL
Subjt:  REVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFL

Query:  KQNGLDFDKLKEFGIPI--NEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEK
        +++GLD  K+++ G+ +    F  K   +FR  + V +VTF G YD  Y L  +   G++PE+  EFA  V +  G V D K MA FCEGL +  LGL K
Subjt:  KQNGLDFDKLKEFGIPI--NEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEK

Query:  LAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGL
        LAQL+   R G  HHAGSDSL+TA ++ K+K+ +E  S    G +YG+
Subjt:  LAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-5142.34Show/hide
Query:  REVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFL
        R VW  N D E+A + +CL  +P++  DTE+PG I  T + +  ++ Y   + NV  TKLIQ G T  +  G IG  WE NFS+F    DT N  S+ FL
Subjt:  REVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFL

Query:  KQNGLDFDKLKEFGIPI--NEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEK
        +++GLD  K+++ G+ +    F  K   +FR  + V +VTF G YD  Y L  +   G++PE+  EFA  V +  G V D K MA FCEGL +  LGL K
Subjt:  KQNGLDFDKLKEFGIPI--NEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEK

Query:  LAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGL
        LAQL+   R G  HHAGSDSL+TA ++ K+K+ +E  S    G +YG+
Subjt:  LAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGL

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-4844.54Show/hide
Query:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK
        EVW  N ++E+ ++ DCL     + IDTEFPG ++ TP  A EE  Y D +FNV+ T LIQLG T  D  G    TWE N SDFD      N  S++FLK
Subjt:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK

Query:  QNGLDFDKLKEFGIPINE-FTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL
         NGL+ DK++E GI I+E F   +  L  K   + WV F G YD  YL+K +     +PE+ EEF E V++ LG  V D+K +A+ C GL   + GL+++
Subjt:  QNGLDFDKLKEFGIPINE-FTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL

Query:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM
        A ++  KR G  HHAGSDS LTA ++ K+
Subjt:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-4844.98Show/hide
Query:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK
        EVW  N ++E+ ++ DCL  +  + IDTEFPG ++ TP  A EE  Y D +FNV+ T LIQLG T  D  G I  TWE N SDF+      N  S++FLK
Subjt:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK

Query:  QNGLDFDKLKEFGIPINE-FTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL
         NGL+ DK+ E GI I E F   +  L  K   + WV F G YD  YL+K +     +PE+ EEF E VE+ LG  V D+K +A+ C GL   + GL+++
Subjt:  QNGLDFDKLKEFGIPINE-FTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL

Query:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM
        A ++  KR G  HHAGSDS LTA ++ K+
Subjt:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-4845.41Show/hide
Query:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK
        EVW  N   E+ ++ DCL     + IDTEFPG ++ TP  A +E  Y D +FNV+ T LIQLGLT   +   I  TWE N SDF+      N  S++FLK
Subjt:  EVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLK

Query:  QNGLDFDKLKEFGIPINEFTSK-AFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL
         NGLD DK++E GI I EF  + +  L  KH  +RWVTF G YD  YLLK +     +PE+ +EF E V++ LG  V D+K MA  C GL   + GL+++
Subjt:  QNGLDFDKLKEFGIPINEFTSK-AFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGN-VSDLKHMAQFCEGLEDGKLGLEKL

Query:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM
        A ++  +R G  HHAGSDS LTA ++ K+
Subjt:  AQLMNQKRFGNKHHAGSDSLLTASLYAKM

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-5150Show/hide
Query:  LNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNGLDFDKLKEFG
        + DCL  Y  + IDTEFP  +R T   A +E+ Y D  F+V+R KLIQLGLT  D  G IG TWE NFSDF    D  N  S+ FL++NGLD  K++E G
Subjt:  LNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNGLDFDKLKEFG

Query:  IPINEFTSKAFFLFRK-HRIVRWVTFHGLYDIGYLLKAMGVAGE-IPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKH
        I I  F S+ F++ +K  R + WVTFHG YDI YLLK  G  GE +P + E F++ V R LG+V DLK MA  CEGL   +LGLE LA      R G  H
Subjt:  IPINEFTSKAFFLFRK-HRIVRWVTFHGLYDIGYLLKAMGVAGE-IPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKH

Query:  HAGSDSLLTASLYAKMKNQFEL
        HAGS++ LTA ++AK+ + F L
Subjt:  HAGSDSLLTASLYAKMKNQFEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGAGGAAAGCGAGGGCATTCGAGAAGAGGAAACGCTCAGATTCGAGAAGTTTGGTCTCGAAATTTCGATTTGGAACTCGCGAATTTGAATGACTGTCTAAATCT
CTACCCGATTCTGACCATCGACACAGAATTTCCTGGGTTTATTCGGAGTACTCCATGGGGCGCCATTGAAGAAAAACTCTACGACGATTTTCGATTCAATGTGAATCGGA
CTAAGCTCATCCAACTGGGTCTCACGGCGTCTGATGAAATCGGCAATATTGGTAGCACATGGGAGTTCAATTTCTCCGATTTCGACCCCCAAATCGACACCCACAACGCC
TCCTCTGTCTCCTTCCTGAAACAGAACGGCTTGGATTTTGATAAACTGAAGGAATTCGGAATCCCCATCAACGAATTCACTTCCAAAGCCTTTTTTCTCTTCCGAAAGCA
TCGGATTGTTCGATGGGTCACGTTCCACGGCTTGTACGACATTGGGTATCTGCTGAAGGCGATGGGGGTGGCCGGGGAGATACCGGAATCAATGGAGGAATTTGCAGAGC
TGGTGGAGAGGGCACTGGGGAATGTGAGTGATTTGAAGCATATGGCGCAGTTCTGCGAAGGGCTGGAAGATGGGAAACTTGGGCTTGAGAAACTTGCCCAATTGATGAAC
CAGAAGCGCTTTGGAAACAAGCACCACGCTGGCTCAGACAGCTTGCTGACGGCTTCGTTGTATGCGAAGATGAAGAATCAATTCGAGCTTGGTTCAGAGGTCTGTGATGG
GTTTCTGTATGGCCTCAGGATCAGACTCCATGCGAAGATTAAGCTGTATCAGAATCTGATGTTTGGGCAGATTCCTTATGGCCTTCGAGTTTGTTATCCGCCTTGTTACA
TTGCTTAT
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGAGGAAAGCGAGGGCATTCGAGAAGAGGAAACGCTCAGATTCGAGAAGTTTGGTCTCGAAATTTCGATTTGGAACTCGCGAATTTGAATGACTGTCTAAATCT
CTACCCGATTCTGACCATCGACACAGAATTTCCTGGGTTTATTCGGAGTACTCCATGGGGCGCCATTGAAGAAAAACTCTACGACGATTTTCGATTCAATGTGAATCGGA
CTAAGCTCATCCAACTGGGTCTCACGGCGTCTGATGAAATCGGCAATATTGGTAGCACATGGGAGTTCAATTTCTCCGATTTCGACCCCCAAATCGACACCCACAACGCC
TCCTCTGTCTCCTTCCTGAAACAGAACGGCTTGGATTTTGATAAACTGAAGGAATTCGGAATCCCCATCAACGAATTCACTTCCAAAGCCTTTTTTCTCTTCCGAAAGCA
TCGGATTGTTCGATGGGTCACGTTCCACGGCTTGTACGACATTGGGTATCTGCTGAAGGCGATGGGGGTGGCCGGGGAGATACCGGAATCAATGGAGGAATTTGCAGAGC
TGGTGGAGAGGGCACTGGGGAATGTGAGTGATTTGAAGCATATGGCGCAGTTCTGCGAAGGGCTGGAAGATGGGAAACTTGGGCTTGAGAAACTTGCCCAATTGATGAAC
CAGAAGCGCTTTGGAAACAAGCACCACGCTGGCTCAGACAGCTTGCTGACGGCTTCGTTGTATGCGAAGATGAAGAATCAATTCGAGCTTGGTTCAGAGGTCTGTGATGG
GTTTCTGTATGGCCTCAGGATCAGACTCCATGCGAAGATTAAGCTGTATCAGAATCTGATGTTTGGGCAGATTCCTTATGGCCTTCGAGTTTGTTATCCGCCTTGTTACA
TTGCTTAT
Protein sequenceShow/hide protein sequence
MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNA
SSVSFLKQNGLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEKLAQLMN
QKRFGNKHHAGSDSLLTASLYAKMKNQFELGSEVCDGFLYGLRIRLHAKIKLYQNLMFGQIPYGLRVCYPPCYIAY