CuGenDBv2

Gene ID	MS020650
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DUF1279 domain-containing protein
Genome location	scaffold375:1897835..1898290
RNA-Seq Expression	MS020650
Synteny	MS020650
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component)
InterPro domains	IPR009688 - Protein FAM210A/B-like domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6604946.1 hypothetical protein SDJN03_02263, partial [Cucurbita argyrosperma subsp. sororia]

5.7e-66

91.45

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Query:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
        MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNN+DVESLLDKLHMDGFSSKD PQT PSE TSS DDGFVIEERP S  QST V+EPR R
Subjt:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR

Query:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        NRTAELAASTGGALALAVLCNKALLPIR+PITIALTPPI+RLLARRGIMRSG
Subjt:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

XP_022146083.1 uncharacterized protein LOC111015379 [Momordica charantia]

3.7e-73

100

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Query:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
        MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
Subjt:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR

Query:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
Subjt:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

XP_022947464.1 uncharacterized protein LOC111451320 [Cucurbita moschata]

2.6e-66

91.45

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Query:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
        MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKD PQT PSE TSS DDGFVIEERP S  QST ++EPR+R
Subjt:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR

Query:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        NRTAELAASTGGALALAVLCNKALLPIR+PITIALTPPI+RLLARRGIMRSG
Subjt:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

XP_022971121.1 uncharacterized protein LOC111469888 [Cucurbita maxima]

3.4e-66

92.11

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Query:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
        MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKD PQT PSE T S DDGFVIEERP S  QST V+EPR+R
Subjt:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR

Query:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPI+RLLARRGIMRSG
Subjt:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

XP_023533856.1 uncharacterized protein LOC111795580 [Cucurbita pepo subsp. pepo]

8.9e-67

91.45

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Query:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
        MAFFTGGGRFRELLRKYGKVAIGVHFSVS+ASITGLYVAIKNNVDVESLLDKLHMDGFSSKD PQT PSE TSS DDGFVIEERP SE QST ++EPR+R
Subjt:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR

Query:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        NRTAELAASTGGALALAVLCNKALLPIR+PITIALTPPI+RLLARRGIMRSG
Subjt:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CXM4 uncharacterized protein LOC111015379

1.8e-73

100

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Query:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
        MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
Subjt:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR

Query:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
Subjt:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

A0A6J1FU56 uncharacterized protein LOC111448454

2.3e-60

86.18

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Query:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
        MAFFTGGGRFRELL+KYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQ QT P       DDG VIEE P S+ QST  QEPR R
Subjt:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR

Query:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        NRTAELAASTGGALALAVLCNKALLPIRIPITI LTPPI+R+LARRGIMRSG
Subjt:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

A0A6J1G6W3 uncharacterized protein LOC111451320

1.2e-66

91.45

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Query:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
        MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKD PQT PSE TSS DDGFVIEERP S  QST ++EPR+R
Subjt:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR

Query:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        NRTAELAASTGGALALAVLCNKALLPIR+PITIALTPPI+RLLARRGIMRSG
Subjt:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

A0A6J1I2F7 uncharacterized protein LOC111469888

1.6e-66

92.11

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Query:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
        MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKD PQT PSE T S DDGFVIEERP S  QST V+EPR+R
Subjt:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR

Query:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPI+RLLARRGIMRSG
Subjt:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

A0A6J1JD52 uncharacterized protein LOC111483951

2.0e-64

88.82

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Query:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR
        MAFFTGGGRFRELL+KYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQ QT P E+ SS DDG VIEE P SE QST  QEPR R
Subjt:  MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRR

Query:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        NRTAELAASTGGALALAVLCNKALLPIRIPITI LTPPI+R+LARRGIMRSG
Subjt:  NRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G20940.1 Protein of unknown function (DUF1279)

1.5e-32

53.47

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Query:  RFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAA
        R +E+++KYGKVA+GVHFSVS  SI+G Y+AIKNNVDVESLL+K  +  FSSK+ P   PS      + G V  +                 N+T +LA 
Subjt:  RFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAA

Query:  STGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG
        S GGALALAVLCNKAL PIR+PIT+ALTPPI+R L +R I+++G
Subjt:  STGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

Sequences

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CDS sequence

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ATGGCTTTCTTCACCGGCGGCGGCCGATTCCGCGAGCTTCTCAGAAAGTACGGCAAGGTCGCAATCGGAGTTCATTTCTCAGTCTCTGCAGCTTCGATCACTGGCCTCTA
TGTCGCCATCAAGAACAATGTCGATGTCGAATCGCTACTCGACAAGTTGCACATGGATGGATTCTCTTCCAAAGATCAACCGCAGACGATTCCCTCCGAATCCACGTCGT
CCGCAGATGACGGATTTGTGATCGAAGAAAGGCCTGTGTCGGAAAATCAATCGACGGCGGTGCAGGAGCCGAGGAGGAGGAATCGCACCGCCGAGCTCGCAGCGTCGACT
GGCGGCGCGTTGGCTTTGGCCGTGCTTTGCAACAAGGCGCTGCTGCCGATTCGGATTCCGATAACGATTGCGCTCACGCCGCCGATCTCGAGGCTGCTGGCGAGGCGAGG
GATTATGAGAAGTGGT

mRNA sequence

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Protein sequence

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MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAAST
GGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

MS020650 (gene) of Bitter gourd (TR) v1 genome