CuGenDBv2

Gene ID	MS020659
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DDB1- and CUL4-associated factor 8
Genome location	scaffold375:1959837..1960079
RNA-Seq Expression	MS020659
Synteny	MS020659
Gene Ontology terms	GO:0005737 - cytoplasm (cellular component) GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
InterPro domains	IPR045151 - DDB1- and CUL4-associated factor 8-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022146098.1 DDB1- and CUL4-associated factor 8 [Momordica charantia]

2.1e-35

100

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

XP_022986111.1 DDB1- and CUL4-associated factor 8 [Cucurbita maxima]

1.2e-25

80.25

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        MESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR +  DI SDEENEWEA NLE ++GN S EED  E SS+CNIS
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

XP_038902691.1 DDB1- and CUL4-associated factor 8 isoform X1 [Benincasa hispida]

9.6e-28

82.72

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        MESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR + ADIDSDEENEWE+YNL+V++GN S EED  E +SECNIS
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

XP_038902693.1 DDB1- and CUL4-associated factor 8 isoform X2 [Benincasa hispida]

9.6e-28

82.72

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        MESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR + ADIDSDEENEWE+YNL+V++GN S EED  E +SECNIS
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

XP_038902694.1 DDB1- and CUL4-associated factor 8 isoform X3 [Benincasa hispida]

9.6e-28

82.72

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        MESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR + ADIDSDEENEWE+YNL+V++GN S EED  E +SECNIS
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CLR9 DDB1- and CUL4-associated factor 8 isoform X1

1.7e-25

77.78

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        MESN+QGREDHS VTLTPDVI+H LRLQRRQ S FTERR   ADI+SDEENEWEAYNLEV++GN S EED  E +SECNIS
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

A0A5A7T1Q2 DDB1-and CUL4-associated factor 8 isoform X1

1.7e-25

77.78

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        MESN+QGREDHS VTLTPDVI+H LRLQRRQ S FTERR   ADI+SDEENEWEAYNLEV++GN S EED  E +SECNIS
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

A0A6J1CXN7 DDB1- and CUL4-associated factor 8

1.0e-35

100

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

A0A6J1FWZ1 DDB1- and CUL4-associated factor 8

1.3e-25

79.01

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        MESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR +  DI SDE+NEWEA NLE ++GN S EED  E SS+CNIS
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

A0A6J1JA63 DDB1- and CUL4-associated factor 8

5.7e-26

80.25

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        MESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR +  DI SDEENEWEA NLE ++GN S EED  E SS+CNIS
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G45620.1 Transducin/WD40 repeat-like superfamily protein

3.4e-15

58.02

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        ME NR GRED S VTLTPDVIMHVLRLQRRQ SAFTERR  + DI SDE N+       V N + SS+        EC +S
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

AT3G45620.2 Transducin/WD40 repeat-like superfamily protein

3.4e-15

58.02

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Query:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
        ME NR GRED S VTLTPDVIMHVLRLQRRQ SAFTERR  + DI SDE N+       V N + SS+        EC +S
Subjt:  MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

Sequences

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CDS sequence

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ATGGAGTCCAATAGGCAAGGAAGAGAAGACCACTCTCTGGTGACCCTTACTCCTGATGTTATCATGCACGTCCTACGCCTCCAAAGAAGACAGGCATCTGCATTTACAGA
GAGAAGACGCACCACAGCTGATATCGACAGCGATGAAGAAAACGAGTGGGAAGCATATAATCTGGAAGTCGTAAATGGTAATGCCTCTTCTGAAGAAGATCCCGCAGAAG
TTTCTTCTGAGTGTAACATCAGC

mRNA sequence

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Protein sequence

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MESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

MS020659 (gene) of Bitter gourd (TR) v1 genome