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MS020665 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020665
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold375:2033509..2034291
RNA-Seq ExpressionMS020665
SyntenyMS020665
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010594.1 hypothetical protein SDJN02_27388, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-4268.42Show/hide
Query:  MQQRS--LSLFRA-TDDHCII-IGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK
        MQQRS   S FRA TDDHC I   P QEPQGR SP  RS D    G +LPVSDP    R RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IK
Subjt:  MQQRS--LSLFRA-TDDHCII-IGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK

Query:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQS
        D  I  VY  EFPE PK YIDHVELA+LG AGMQIASSPLNLTS GARDL++
Subjt:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQS

XP_022146089.1 uncharacterized protein LOC111015385 [Momordica charantia]1.1e-8099.33Show/hide
Query:  MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEI
        MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEI
Subjt:  MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEI

Query:  TGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP
        TGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLT RGARDLQSIP
Subjt:  TGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP

XP_022986953.1 uncharacterized protein LOC111484535 isoform X1 [Cucurbita maxima]3.3e-4269.08Show/hide
Query:  MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK
        MQQRS   S FRA TDDHC II  P QEPQGR SP  RS D    G  LPVSDP    R RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IK
Subjt:  MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK

Query:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQS
        D  I  VY  EFPE PK YIDHVELA+LG AGMQIASSPLNLTS GARDL++
Subjt:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQS

XP_022986954.1 uncharacterized protein LOC111484535 isoform X2 [Cucurbita maxima]3.3e-4269.08Show/hide
Query:  MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK
        MQQRS   S FRA TDDHC II  P QEPQGR SP  RS D    G  LPVSDP    R RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IK
Subjt:  MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK

Query:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQS
        D  I  VY  EFPE PK YIDHVELA+LG AGMQIASSPLNLTS GARDL++
Subjt:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQS

XP_038902298.1 uncharacterized protein LOC120088933 [Benincasa hispida]4.0e-4365.16Show/hide
Query:  MQQRSLSLFRATDDH-----CIIIGPTQEPQGRRSPSRRSTDGLD--GGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNL
        MQQR+LS FRAT+DH      I   PTQEP+GRRSP  RS+  +D    GLLP+SDPR   + RDH S YR AERWIHLIPL L L++FILWW SYPVN+
Subjt:  MQQRSLSLFRATDDH-----CIIIGPTQEPQGRRSPSRRSTDGLD--GGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNL

Query:  EIKDEEITGVYPY-EFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQ
         IKD  I+ VY   +FPE PK YIDHVELAVLG AGMQIASSPLN+TS G RDL+
Subjt:  EIKDEEITGVYPY-EFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQ

TrEMBL top hitse value%identityAlignment
A0A5D3CTN8 Uncharacterized protein2.7e-2956.49Show/hide
Query:  MQQRSLSLFR-ATDDHCIIIGPT--QEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKD
        MQQR+   FR  TD+HC ++  T  +EPQG R  S    D    G LLP+SDPR   R RD  S YR    WIHLIPL L L++FILWW SYPV   IKD
Subjt:  MQQRSLSLFR-ATDDHCIIIGPT--QEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKD

Query:  EEITGVYPYE-FPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP
          I   Y  E  PE PK Y+DH ELAVLG AGM IASSPLNLTS G RD + IP
Subjt:  EEITGVYPYE-FPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP

A0A6J1CX54 uncharacterized protein LOC1110153855.2e-8199.33Show/hide
Query:  MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEI
        MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEI
Subjt:  MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEI

Query:  TGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP
        TGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLT RGARDLQSIP
Subjt:  TGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP

A0A6J1FUE4 uncharacterized protein LOC1114488841.8e-4168.67Show/hide
Query:  MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK
        MQQRS   S FRA TDDHC II  P QEPQGR SP  RS D    G +LPVSDP    R RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IK
Subjt:  MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK

Query:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDL
        D  I  VY  EFPE PK YIDHVELA+L  AGMQIASSPLNLTS G RDL
Subjt:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDL

A0A6J1JHI4 uncharacterized protein LOC111484535 isoform X21.6e-4269.08Show/hide
Query:  MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK
        MQQRS   S FRA TDDHC II  P QEPQGR SP  RS D    G  LPVSDP    R RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IK
Subjt:  MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK

Query:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQS
        D  I  VY  EFPE PK YIDHVELA+LG AGMQIASSPLNLTS GARDL++
Subjt:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQS

A0A6J1JI18 uncharacterized protein LOC111484535 isoform X11.6e-4269.08Show/hide
Query:  MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK
        MQQRS   S FRA TDDHC II  P QEPQGR SP  RS D    G  LPVSDP    R RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IK
Subjt:  MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIK

Query:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQS
        D  I  VY  EFPE PK YIDHVELA+LG AGMQIASSPLNLTS GARDL++
Subjt:  DEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGAGATCTTTGAGCTTGTTCCGAGCAACTGACGATCATTGCATAATCATCGGCCCTACACAAGAGCCGCAGGGAAGACGCTCTCCATCAAGAAGATCAACGGA
CGGTTTAGACGGCGGCGGTCTTCTTCCGGTTTCCGATCCTCGCTCCGGCTTTAGGAATCGGGATCACGTTTCGCCCTACAGGTTGGCGGAGAGGTGGATTCATTTGATTC
CCTTGGCTCTGTTCCTCGTCGTCTTCATTCTCTGGTGGTTCTCTTATCCAGTGAATTTGGAGATCAAGGATGAAGAAATTACCGGAGTTTATCCATACGAGTTTCCGGAG
CCGCCGAAGAATTACATTGATCACGTCGAACTTGCCGTCTTAGGAGCTGCCGGAATGCAGATTGCTTCGAGTCCTCTGAATCTAACCAGCAGAGGCGCTCGAGATTTACA
GAGCATACCA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAGAGATCTTTGAGCTTGTTCCGAGCAACTGACGATCATTGCATAATCATCGGCCCTACACAAGAGCCGCAGGGAAGACGCTCTCCATCAAGAAGATCAACGGA
CGGTTTAGACGGCGGCGGTCTTCTTCCGGTTTCCGATCCTCGCTCCGGCTTTAGGAATCGGGATCACGTTTCGCCCTACAGGTTGGCGGAGAGGTGGATTCATTTGATTC
CCTTGGCTCTGTTCCTCGTCGTCTTCATTCTCTGGTGGTTCTCTTATCCAGTGAATTTGGAGATCAAGGATGAAGAAATTACCGGAGTTTATCCATACGAGTTTCCGGAG
CCGCCGAAGAATTACATTGATCACGTCGAACTTGCCGTCTTAGGAGCTGCCGGAATGCAGATTGCTTCGAGTCCTCTGAATCTAACCAGCAGAGGCGCTCGAGATTTACA
GAGCATACCA
Protein sequenceShow/hide protein sequence
MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPE
PPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP