; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020669 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020669
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionembryo-specific protein ATS3A-like
Genome locationscaffold375:2063463..2063897
RNA-Seq ExpressionMS020669
SyntenyMS020669
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR010417 - Embryo-specific ATS3
IPR036392 - PLAT/LH2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035277.1 uncharacterized protein E6C27_scaffold228G00690 [Cucumis melo var. makuwa]1.2e-7390.28Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLNS HV+RVDPLEP+VLDD+SRKPFQ CMVDQFQVTGKCVTSP+CY+YLKL+GADDWRPGFV+V
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV

Query:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRK
        RSLEGPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFGIK +RK
Subjt:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRK

XP_008463858.1 PREDICTED: uncharacterized protein LOC103501893 [Cucumis melo]3.2e-7490.34Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLNS HV+RVDPLEP+VLDD+SRKPFQ CMVDQFQVTGKCVTSP+CY+YLKL+GADDWRPGFV+V
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV

Query:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV
        RSLEGPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFGIK +RKV
Subjt:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV

XP_011657238.1 embryo-specific protein ATS3A isoform X2 [Cucumis sativus]3.0e-7287.59Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLN  HV+RVDPLEP+VLDD+SRKPFQ CMVDQFQVTGKCVTSP+CY+YLKL+G DDWRPGFV+V
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV

Query:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV
        RSL+GPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFG+K +RKV
Subjt:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV

XP_022146261.1 embryo-specific protein ATS3A-like [Momordica charantia]1.2e-81100Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
        MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV

Query:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV
        RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV
Subjt:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV

XP_038902188.1 embryo-specific protein ATS3A-like [Benincasa hispida]3.2e-7491.03Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
        MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNS  V+RVDPL+P+VLDDMSRKPFQACMVDQFQVTGKCVTSP+CY+YLKL GADDWRPGFV+V
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV

Query:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV
        RSLEGPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFGIK +RKV
Subjt:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV

TrEMBL top hitse value%identityAlignment
A0A0A0KC84 Uncharacterized protein1.5e-7287.59Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLN  HV+RVDPLEP+VLDD+SRKPFQ CMVDQFQVTGKCVTSP+CY+YLKL+G DDWRPGFV+V
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV

Query:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV
        RSL+GPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFG+K +RKV
Subjt:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV

A0A1S3CK61 uncharacterized protein LOC1035018931.6e-7490.34Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLNS HV+RVDPLEP+VLDD+SRKPFQ CMVDQFQVTGKCVTSP+CY+YLKL+GADDWRPGFV+V
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV

Query:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV
        RSLEGPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFGIK +RKV
Subjt:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV

A0A5D3CVS5 Uncharacterized protein5.9e-7490.28Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLNS HV+RVDPLEP+VLDD+SRKPFQ CMVDQFQVTGKCVTSP+CY+YLKL+GADDWRPGFV+V
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV

Query:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRK
        RSLEGPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFGIK +RK
Subjt:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRK

A0A6J1CYS2 embryo-specific protein ATS3A-like5.9e-82100Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
        MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV

Query:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV
        RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV
Subjt:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV

A0A6J1L2N6 embryo-specific protein ATS3A-like8.2e-6884.83Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV
        MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVV  LNS HV+RVD LEP+VLDDM RKPFQACMVD FQVT KCVTSP+CY+YLK+AGADDWRPGFV V
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKV

Query:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV
        R LE PHLSS  FYFRRVLPRHVWHG DTC G+VTPFGIK  RKV
Subjt:  RSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV

SwissProt top hitse value%identityAlignment
Q681K2 Embryo-specific protein ATS3A6.4e-1733.59Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVR
        Y V ++T+C+  + T + +S+ FGD   N++ V+R                LDD S + F+ C  D ++++G C+   VCY+YL   G+D W+P  VK+ 
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVR

Query:  SLEGPHLSSGYFYFRRVLPRHVWHGFDTCGG
           G  + S  FY+   LP  VW+GF+ C G
Subjt:  SLEGPHLSSGYFYFRRVLPRHVWHGFDTCGG

Q6NPM5 Embryo-specific protein ATS3B1.1e-1335.38Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVR
        Y V + T+C+    T + +S+ FGD   N I   R                LDD S K F+ C  D FQ+ G C T  +CYVYL  +G D W P  VK+ 
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVR

Query:  SLEGPHLSSGY-FYFRRVLPRHVWHGFDTC
        S    H S    F +   +P  VW+GF+ C
Subjt:  SLEGPHLSSGY-FYFRRVLPRHVWHGFDTC

Q9LYP6 Embryo-specific protein ATS31.9e-0828.03Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP--FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVK
        Y V V T+C     T + +S+ FGD + N +   +L                  + R P     C  + FQV G+C+  P+C +Y+   G D W P  ++
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP--FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVK

Query:  VRSLEGPHLSSGYFYFRRVLPR-HVWHGFDTC
        + S EG    S  F F + +P+ + W+G + C
Subjt:  VRSLEGPHLSSGYFYFRRVLPR-HVWHGFDTC

Arabidopsis top hitse value%identityAlignment
AT2G41475.1 Embryo-specific protein 3, (ATS3)4.5e-1833.59Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVR
        Y V ++T+C+  + T + +S+ FGD   N++ V+R                LDD S + F+ C  D ++++G C+   VCY+YL   G+D W+P  VK+ 
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVR

Query:  SLEGPHLSSGYFYFRRVLPRHVWHGFDTCGG
           G  + S  FY+   LP  VW+GF+ C G
Subjt:  SLEGPHLSSGYFYFRRVLPRHVWHGFDTCGG

AT5G07190.1 seed gene 31.3e-0928.03Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP--FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVK
        Y V V T+C     T + +S+ FGD + N +   +L                  + R P     C  + FQV G+C+  P+C +Y+   G D W P  ++
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP--FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVK

Query:  VRSLEGPHLSSGYFYFRRVLPR-HVWHGFDTC
        + S EG    S  F F + +P+ + W+G + C
Subjt:  VRSLEGPHLSSGYFYFRRVLPR-HVWHGFDTC

AT5G07190.2 seed gene 31.3e-0928.03Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP--FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVK
        Y V V T+C     T + +S+ FGD + N +   +L                  + R P     C  + FQV G+C+  P+C +Y+   G D W P  ++
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP--FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVK

Query:  VRSLEGPHLSSGYFYFRRVLPR-HVWHGFDTC
        + S EG    S  F F + +P+ + W+G + C
Subjt:  VRSLEGPHLSSGYFYFRRVLPR-HVWHGFDTC

AT5G62200.1 Embryo-specific protein 3, (ATS3)8.0e-1535.38Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVR
        Y V + T+C+    T + +S+ FGD   N I   R                LDD S K F+ C  D FQ+ G C T  +CYVYL  +G D W P  VK+ 
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVR

Query:  SLEGPHLSSGY-FYFRRVLPRHVWHGFDTC
        S    H S    F +   +P  VW+GF+ C
Subjt:  SLEGPHLSSGY-FYFRRVLPRHVWHGFDTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGCCGTCACCGTGGAAACAACCTGCACGAAGGGCGCCGACACGTCGAACCACGTCAGCCTGAGGTTCGGCGACACGAACTCGAACGACATCGTCGTAAGACGTTT
GAATTCAATGCACGTGAAGAGGGTGGACCCTTTGGAGCCTGAAGTTCTGGACGACATGTCGAGAAAGCCGTTCCAAGCTTGTATGGTGGATCAGTTCCAAGTGACCGGAA
AATGCGTGACCTCGCCGGTTTGTTACGTCTACCTAAAACTCGCCGGCGCCGACGACTGGCGGCCGGGATTCGTCAAAGTCCGGTCGCTGGAGGGCCCACATCTTAGCTCT
GGTTATTTCTATTTCCGACGTGTATTGCCTCGGCACGTGTGGCATGGCTTCGACACGTGTGGAGGCGAAGTCACTCCTTTTGGGATCAAACACCATAGAAAAGTC
mRNA sequenceShow/hide mRNA sequence
ATGTACGCCGTCACCGTGGAAACAACCTGCACGAAGGGCGCCGACACGTCGAACCACGTCAGCCTGAGGTTCGGCGACACGAACTCGAACGACATCGTCGTAAGACGTTT
GAATTCAATGCACGTGAAGAGGGTGGACCCTTTGGAGCCTGAAGTTCTGGACGACATGTCGAGAAAGCCGTTCCAAGCTTGTATGGTGGATCAGTTCCAAGTGACCGGAA
AATGCGTGACCTCGCCGGTTTGTTACGTCTACCTAAAACTCGCCGGCGCCGACGACTGGCGGCCGGGATTCGTCAAAGTCCGGTCGCTGGAGGGCCCACATCTTAGCTCT
GGTTATTTCTATTTCCGACGTGTATTGCCTCGGCACGTGTGGCATGGCTTCGACACGTGTGGAGGCGAAGTCACTCCTTTTGGGATCAAACACCATAGAAAAGTC
Protein sequenceShow/hide protein sequence
MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSS
GYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV