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MS020670 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020670
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP synthase epsilon chain, chloroplastic
Genome locationscaffold375:2069856..2069957
RNA-Seq ExpressionMS020670
SyntenyMS020670
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009415672.1 ATP synthase CF1 epsilon subunit [Polyspora speciosa]2.0e-0679.41Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT +DIGI RIRL VND+WLTM LMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
YP_009456067.1 ATP synthase CF1 epsilon subunit [Momordica charantia]9.4e-0991.18Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT LDIGIFRIRL VNDEWLTMTLMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
YP_009572703.1 ATP synthase CF1 epsilon subunit [Seguieria aculeata]2.0e-0679.41Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT +DIGI RIRL VND+WLTM LMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
YP_009674397.1 ATP synthase CF1 epsilon subunit [Siraitia grosvenorii]1.0e-0785.29Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +P+HAPIAT LDIGIFRIRL  NDEWLTMTLMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
YP_009752926.1 CF1 subunit epsilon [Momordica sessilifolia]9.4e-0991.18Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT LDIGIFRIRL VNDEWLTMTLMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
TrEMBL top hitse value%identityAlignment
A0A221HMN1 ATP synthase CF1 epsilon subunit9.4e-0779.41Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT +DIGI RIRL VND+WLTM LMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
A0A2I6BZY8 ATP synthase epsilon chain, chloroplastic4.5e-0991.18Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT LDIGIFRIRL VNDEWLTMTLMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
A0A515BLP6 ATP synthase epsilon chain, chloroplastic5.0e-0885.29Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +P+HAPIAT LDIGIFRIRL  NDEWLTMTLMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
A0A6C0U8R2 ATP synthase epsilon chain, chloroplastic5.0e-0885.29Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +P+HAPIAT LDIGIFRIRL  NDEWLTMTLMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
A0A6H0EUK5 ATP synthase epsilon chain, chloroplastic4.5e-0991.18Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT LDIGIFRIRL VNDEWLTMTLMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
SwissProt top hitse value%identityAlignment
A0ZZ41 ATP synthase epsilon chain, chloroplastic8.2e-0876.47Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT +DIGI RIRL  ND+WLTM LMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
Q06GZ1 ATP synthase epsilon chain, chloroplastic8.2e-0876.47Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT +DIGI RIRL  ND+WLTM LMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
Q2L911 ATP synthase epsilon chain, chloroplastic8.2e-0876.47Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT +DIGI RIRL  ND+WLTM LMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
Q332X2 ATP synthase epsilon chain, chloroplastic4.8e-0876.47Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT +DIGI RIRL  ND+WLTM LMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
Q49KZ2 ATP synthase epsilon chain, chloroplastic8.2e-0876.47Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        +PNHAPIAT +DIGI RIRL  ND+WLTM LMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
Arabidopsis top hitse value%identityAlignment
ATCG00470.1 ATP synthase epsilon chain3.5e-0664.71Show/hide
Query:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG
        + NHAPIAT +DIGI +IRL   ++WLTM LMGG
Subjt:  IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTCCAAATCACGCACCTATTGCCACAGATTTAGATATAGGTATTTTTAGAATACGCCTTATTGTTAATGACGAATGGTTAACGATGACTCTGATGGGTGGT
mRNA sequenceShow/hide mRNA sequence
ATTCCAAATCACGCACCTATTGCCACAGATTTAGATATAGGTATTTTTAGAATACGCCTTATTGTTAATGACGAATGGTTAACGATGACTCTGATGGGTGGT
Protein sequenceShow/hide protein sequence
IPNHAPIATDLDIGIFRIRLIVNDEWLTMTLMGG